Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
2
replies
3.2k
views
How to run Picard docker image
next-gen alignment docker picard
updated 3 months ago by ▴ 350 • written 4.0 years ago by ▴ 180
0
votes
0
replies
909
views
Comment: Comment: Filtering a GFF to retain only exons with CDS annotation
14 months ago by elcortegano ▴ 180
1
vote
2
replies
909
views
Filtering a GFF to retain only exons with CDS annotation
gff annotation
14 months ago by elcortegano ▴ 180
1
vote
1
reply
1.3k
views
Comment: Comment: Faster alternative to samtools calmd
19 months ago by elcortegano ▴ 180
0
votes
1
reply
1.3k
views
Comment: Comment: Faster alternative to samtools calmd
19 months ago by elcortegano ▴ 180
0
votes
1
reply
1.3k
views
Comment: Comment: Faster alternative to samtools calmd
19 months ago by elcortegano ▴ 180
2
votes
8
replies
1.3k
views
Faster alternative to samtools calmd
alignment BAM MD
updated 19 months ago by 5.5k • written 19 months ago by ▴ 180
2
votes
0
replies
12k
views
Comment: Comment: find positions of a short sequence in a genome
21 months ago by elcortegano ▴ 180
0
votes
0
replies
1.0k
views
Comment: Comment: Getting coordinates for a given sequence motif
21 months ago by elcortegano ▴ 180
7
votes
4
replies
1.0k
views
Getting coordinates for a given sequence motif
genome assembly
updated 21 months ago by 76k • written 21 months ago by ▴ 180
3
votes
1
reply
1.0k
views
Calling TE sequences from VCF files
next-gen sniffles variant_calling
updated 2.5 years ago by ▴ 20 • written 3.8 years ago by ▴ 180
0
votes
2
replies
808
views
Arrow crashes during second iteration
genome polish arrow gcpp
2.6 years ago by elcortegano ▴ 180
0
votes
0
replies
808
views
Comment: C: Arrow crashes during second iteration
2.6 years ago by elcortegano ▴ 180
1
vote
1
reply
21k
views
Comment: C: Get intronic and intergenic sequences based on gff file
3.2 years ago by elcortegano ▴ 180
0
votes
0
replies
1.9k
views
Answer: A: Syntax Error near unexpected token (
3.3 years ago by elcortegano ▴ 180
0
votes
0
replies
1.8k
views
Comment: C: biomart webservice error when using data from Phytozome
3.3 years ago by elcortegano ▴ 180
10
votes
9
replies
1.8k
views
biomart webservice error when using data from Phytozome
R software error
updated 3.3 years ago by ★ 2.0k • written 3.3 years ago by ▴ 180
0
votes
1
reply
1.8k
views
Comment: C: biomart webservice error when using data from Phytozome
3.3 years ago by elcortegano ▴ 180
0
votes
2
replies
1.8k
views
Comment: C: biomart webservice error when using data from Phytozome
3.3 years ago by elcortegano ▴ 180
4
votes
2
replies
1.2k
views
Compilation error for PAML
software error
updated 11 months ago by ▴ 10 • written 3.3 years ago by ▴ 180
0
votes
0
replies
778
views
Distribution of QUAL scores in variant and invatiant sites
next-gen
3.5 years ago by elcortegano ▴ 180
2
votes
0
replies
1.5k
views
Wrong intervals with bedtools makewindows
next-gen bedtools
3.5 years ago by elcortegano ▴ 180
1
vote
3
replies
971
views
Compute Mapping quality for invariant sites
next-gen mapping-quality
3.5 years ago by elcortegano ▴ 180
1
vote
0
replies
971
views
Answer: A: Compute Mapping quality for invariant sites
3.5 years ago by elcortegano ▴ 180
0
votes
0
replies
971
views
Comment: C: Compute Mapping quality for invariant sites
3.6 years ago by elcortegano ▴ 180
0
votes
1
reply
770
views
Comment: C: Estimate distances to closest gene from VCF and GFF files
3.6 years ago by elcortegano ▴ 180
2
votes
3
replies
770
views
Estimate distances to closest gene from VCF and GFF files
next-gen vcf gff
3.6 years ago by elcortegano ▴ 180
8
votes
7
replies
1.5k
views
How to properly measure the length of a reference genome
next-gen genome k-mer
updated 3.7 years ago by 3.0k • written 4.0 years ago by ▴ 180
1
vote
0
replies
1.5k
views
Answer: A: How to properly measure the length of a reference genome
3.7 years ago by elcortegano ▴ 180
0
votes
0
replies
937
views
What does "Infinity" QUAL values mean in VCF files
next-gen vcf
3.9 years ago by elcortegano ▴ 180
6
votes
11
replies
1.3k
views
Are reads with the same length and position always "duplicates"
next-gen picard
3.9 years ago by elcortegano ▴ 180
0
votes
0
replies
1.3k
views
Comment: C: Are reads with the same length and position always "duplicates"
3.9 years ago by elcortegano ▴ 180
0
votes
1
reply
1.3k
views
Comment: C: Are reads with the same length and position always "duplicates"
3.9 years ago by elcortegano ▴ 180
0
votes
1
reply
1.3k
views
Comment: C: Are reads with the same length and position always "duplicates"
3.9 years ago by elcortegano ▴ 180
0
votes
0
replies
1.3k
views
Comment: C: Are reads with the same length and position always "duplicates"
3.9 years ago by elcortegano ▴ 180
0
votes
0
replies
1.3k
views
Comment: C: Are reads with the same length and position always "duplicates"
3.9 years ago by elcortegano ▴ 180
3
votes
0
replies
4.5k
views
Comment: C: Is it possible to run IGV in batch mode without opening the GUI?
4.0 years ago by elcortegano ▴ 180
12
votes
3
replies
4.5k
views
Is it possible to run IGV in batch mode without opening the GUI?
next-gen alignment igv
updated 4.0 years ago by ★ 3.3k • written 4.0 years ago by ▴ 180
9
votes
11
replies
3.5k
views
6 follow
Is it possible to retrieve the original reads from a BAM file?
next-gen bam fastq
updated 4.0 years ago by ▴ 310 • written 4.0 years ago by ▴ 180
2
votes
1
reply
3.5k
views
Answer: A: Is it possible to retrieve the original reads from a BAM file?
4.0 years ago by elcortegano ▴ 180
0
votes
1
reply
3.5k
views
Comment: C: Is it possible to retrieve the original reads from a BAM file?
4.0 years ago by elcortegano ▴ 180
0
votes
0
replies
3.2k
views
Answer: A: How to run Picard docker image
4.0 years ago by elcortegano ▴ 180
0
votes
0
replies
1.5k
views
Comment: C: How to properly measure the length of a reference genome
4.0 years ago by elcortegano ▴ 180
0
votes
0
replies
1.5k
views
Comment: C: How to properly measure the length of a reference genome
4.0 years ago by elcortegano ▴ 180
1
vote
1
reply
1.4k
views
Any recommendations for improving Base Quality Score Recalibration (BQSR) for non-model organisms?
next-gen bqsr variant_calling
4.0 years ago by elcortegano ▴ 180
0
votes
0
replies
2.4k
views
Comment: C: MarkDuplicates: Mates are missing
4.0 years ago by elcortegano ▴ 180
46 results • Page 1 of 1
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6