Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
1.0k
views
Comment: Comment: Viral genes not showing up in combined mouse+virus alignment
22 months ago by cook.675 ▴ 250
0
votes
3
replies
1.0k
views
Viral genes not showing up in combined mouse+virus alignment
RNAseq
22 months ago by cook.675 ▴ 250
0
votes
1
reply
1.0k
views
Comment: Comment: Viral genes not showing up in combined mouse+virus alignment
22 months ago by cook.675 ▴ 250
0
votes
0
replies
1.7k
views
Comment: Comment: featureCount Error "No paired-end reads were detected in paired-end read library
22 months ago by cook.675 ▴ 250
0
votes
2
replies
1.7k
views
featureCount Error "No paired-end reads were detected in paired-end read library"
Subread RNAseq featureCount
updated 22 months ago by 13k • written 22 months ago by ▴ 250
1
vote
4
replies
1.4k
views
RNAseq how to map Mouse+Virus Genome with STAR
STAR GTF RNA-seq fasta
updated 22 months ago by 153k • written 22 months ago by ▴ 250
0
votes
1
reply
1.4k
views
Comment: Comment: RNAseq how to map Mouse+Virus Genome with STAR
updated 22 months ago by 153k • written 22 months ago by ▴ 250
0
votes
2
replies
787
views
How to bin groups of 20 cells based amount of a metadata value
data seurat scRNA-seq R
updated 3.4 years ago by 153k • written 3.4 years ago by ▴ 250
0
votes
1
reply
787
views
Answer: Answer: How to bin groups of 20 cells based amount of a metadata value
3.4 years ago by cook.675 ▴ 250
0
votes
1
reply
796
views
How to label metadata of Seurat object based gene read count
seurat scRNA-seq
updated 3.5 years ago by 13k • written 3.5 years ago by ▴ 250
15
votes
12
replies
34k
views
10 follow
Pull number of cells in cluster from seurat object
RNA-Seq seurat
updated 3.6 years ago by 153k • written 6.0 years ago by ▴ 250
4
votes
6
replies
14k
views
Looking for differential gene expression between treatment, within a specific cluster (seurat)
seurat
updated 16 months ago by ★ 19k • written 6.0 years ago by ▴ 250
0
votes
2
replies
903
views
RNAseq Per tile sequence quality question
RNAseq fastqc
4.4 years ago by cook.675 ▴ 250
0
votes
0
replies
903
views
Comment: Comment: RNAseq Per tile sequence quality question
4.4 years ago by cook.675 ▴ 250
7
votes
3
replies
13k
views
appending information to seurat object meta.data
scRNA seurat
updated 4.1 years ago by ▴ 330 • written 5.8 years ago by ▴ 250
4
votes
3
replies
11k
views
How to remove entire rows from seurat object based on cellhash read
seurat
updated 5.4 years ago by • 0 • written 6.0 years ago by ▴ 250
1
vote
1
reply
2.1k
views
Calling gene names from a list within Seurat subset function
seurat RNA-Seq
updated 2.5 years ago by • 0 • written 5.4 years ago by ▴ 250
1
vote
1
reply
1.0k
views
Summing data from 3 different parts of an R object at once
R seurat scRNA seq
updated 5.8 years ago by 20 • written 5.9 years ago by ▴ 250
0
votes
0
replies
1.7k
views
Comment: C: How to extract a specific gene sequence for a specific cell from scRNA-seq fastq
5.8 years ago by cook.675 ▴ 250
0
votes
2
replies
1.7k
views
How to extract a specific gene sequence for a specific cell from scRNA-seq fastq file
scRNA-seq sequencing
updated 5.8 years ago by • 0 • written 5.8 years ago by ▴ 250
0
votes
1
reply
24k
views
Comment: C: subsetting out cells from seurat object based on expression of 1 gene
5.8 years ago by cook.675 ▴ 250
0
votes
6
replies
2.7k
views
Examination of data matrix from CITE-seq-counts
RNA-Seq seurat
updated 5.8 years ago by 20 • written 6.0 years ago by ▴ 250
0
votes
1
reply
24k
views
Comment: C: subsetting out cells from seurat object based on expression of 1 gene
5.8 years ago by cook.675 ▴ 250
0
votes
0
replies
7.7k
views
Comment: C: How to combine seperate seurat meta.data ID;s into one column?
5.8 years ago by cook.675 ▴ 250
0
votes
2
replies
7.7k
views
How to combine seperate seurat meta.data ID;s into one column?
seurat scRNA
updated 5.8 years ago by 45k • written 5.8 years ago by ▴ 250
5
votes
10
replies
24k
views
subsetting out cells from seurat object based on expression of 1 gene
seurat R
updated 4.0 years ago by ▴ 100 • written 5.9 years ago by ▴ 250
6
votes
3
replies
4.7k
views
A brief question regarding regressing out cell cycle effects or ribosomal/mitochondrial genes
seuart scRNA seq
updated 5.9 years ago by ★ 19k • written 5.9 years ago by ▴ 250
0
votes
1
reply
1.5k
views
Comment: C: DEG data per-cell
5.9 years ago by cook.675 ▴ 250
0
votes
1
reply
1.5k
views
Comment: C: DEG data per-cell
5.9 years ago by cook.675 ▴ 250
0
votes
5
replies
1.5k
views
DEG data per-cell
RNA-Seq
5.9 years ago by cook.675 ▴ 250
0
votes
0
replies
24k
views
Comment: C: subsetting out cells from seurat object based on expression of 1 gene
5.9 years ago by cook.675 ▴ 250
0
votes
1
reply
24k
views
Comment: C: subsetting out cells from seurat object based on expression of 1 gene
5.9 years ago by cook.675 ▴ 250
0
votes
0
replies
1.6k
views
Interpreting DEG heatmap between treatment groups
heatmap scRNASEQ
5.9 years ago by cook.675 ▴ 250
0
votes
0
replies
1.6k
views
Comment: C: QC filtering by Count depth
5.9 years ago by cook.675 ▴ 250
0
votes
0
replies
2.8k
views
Answer: C: How to concurrently filter RNA and CITEseq data within seurat object
5.9 years ago by cook.675 ▴ 250
1
vote
1
reply
2.8k
views
How to concurrently filter RNA and CITEseq data within seurat object
scRNA seurat
5.9 years ago by cook.675 ▴ 250
0
votes
1
reply
1.6k
views
QC filtering by Count depth
scRNAseq
5.9 years ago by cook.675 ▴ 250
0
votes
0
replies
2.7k
views
Comment: C: PCA plot interpretation from scRNA data set
5.9 years ago by cook.675 ▴ 250
0
votes
1
reply
2.7k
views
Comment: C: PCA plot interpretation from scRNA data set
5.9 years ago by cook.675 ▴ 250
0
votes
6
replies
2.7k
views
PCA plot interpretation from scRNA data set
PCA scRNA seq seurat
5.9 years ago by cook.675 ▴ 250
0
votes
0
replies
1.0k
views
Answer: C: Summing data from 3 different parts of an R object at once
5.9 years ago by cook.675 ▴ 250
0
votes
0
replies
2.3k
views
Comment: C: subsetting matrix elements and creating a histogram
5.9 years ago by cook.675 ▴ 250
0
votes
1
reply
2.3k
views
Comment: C: subsetting matrix elements and creating a histogram
5.9 years ago by cook.675 ▴ 250
0
votes
1
reply
2.3k
views
Comment: C: subsetting matrix elements and creating a histogram
5.9 years ago by cook.675 ▴ 250
0
votes
1
reply
2.3k
views
Comment: C: subsetting matrix elements and creating a histogram
5.9 years ago by cook.675 ▴ 250
0
votes
6
replies
2.3k
views
subsetting matrix elements and creating a histogram
RNA-Seq
updated 5.9 years ago by 45k • written 5.9 years ago by ▴ 250
0
votes
0
replies
2.7k
views
Comment: C: Examination of data matrix from CITE-seq-counts
6.0 years ago by cook.675 ▴ 250
0
votes
1
reply
2.7k
views
Comment: C: Examination of data matrix from CITE-seq-counts
6.0 years ago by cook.675 ▴ 250
0
votes
1
reply
2.7k
views
Comment: C: Examination of data matrix from CITE-seq-counts
6.0 years ago by cook.675 ▴ 250
0
votes
0
replies
2.7k
views
Comment: C: Examination of data matrix from CITE-seq-counts
6.0 years ago by cook.675 ▴ 250
67 results • Page 1 of 2
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6