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2
votes
0
replies
674
views
Answer:
Answer: Parallel AUGUSTUS Execution via GNU Parallel
8 weeks ago by
ole.tange
★ 4.5k
367
votes
82
replies
148k
views
35 follow
Tool:
Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
parallel
next-gen
ngs
updated 8 months ago by
jena
▴ 320 • written 11.8 years ago by
ole.tange
★ 4.5k
0
votes
0
replies
148k
views
Answer:
Answer: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
19 months ago by
ole.tange
★ 4.5k
3
votes
0
replies
2.3k
views
Answer:
Answer: How do I use GNU parallel with two inputs?
20 months ago by
ole.tange
★ 4.5k
1
vote
0
replies
2.3k
views
Comment:
Comment: How do I use GNU parallel with two inputs?
20 months ago by
ole.tange
★ 4.5k
1
vote
0
replies
1.1k
views
Comment:
Comment: Problem adding file names to fasta headers in multiple directories using awk
2.1 years ago by
ole.tange
★ 4.5k
2
votes
0
replies
1.2k
views
Answer:
Answer: Automating pipeline with Parallel, read files in separate folders
2.5 years ago by
ole.tange
★ 4.5k
0
votes
0
replies
2.7k
views
Comment:
Comment: why do i get this gnu parallel warning (Trimmomatic/Bowtie2)
3.0 years ago by
ole.tange
★ 4.5k
1
vote
1
reply
2.7k
views
Comment:
Comment: why do i get this gnu parallel warning (Trimmomatic/Bowtie2)
3.1 years ago by
ole.tange
★ 4.5k
1
vote
0
replies
2.3k
views
Comment:
Comment: Help understanding "sed" command in a loop
3.1 years ago by
ole.tange
★ 4.5k
0
votes
1
reply
1.2k
views
Answer:
Answer: Unicycler and GNU parallel
3.3 years ago by
ole.tange
★ 4.5k
0
votes
1
reply
655
views
Determine where an interleaved FASTQ record starts
fastq
updated 3.3 years ago by
cpad0112
21k • written 3.3 years ago by
ole.tange
★ 4.5k
2
votes
2
replies
2.8k
views
Answer:
A: Using GNU parallel to speed up merging VCFs with bcftools
3.8 years ago by
ole.tange
★ 4.5k
1
vote
1
reply
2.8k
views
Comment:
C: concatenate all the files with matching prefix in a directory of several files
3.8 years ago by
ole.tange
★ 4.5k
1
vote
0
replies
2.8k
views
Answer:
A: concatenate all the files with matching prefix in a directory of several files
3.8 years ago by
ole.tange
★ 4.5k
4
votes
3
replies
3.5k
views
Answer:
A: Is it possible to run haplotypecaller in gnu parallel ?
3.9 years ago by
ole.tange
★ 4.5k
0
votes
1
reply
3.5k
views
Comment:
C: Is it possible to run haplotypecaller in gnu parallel ?
3.9 years ago by
ole.tange
★ 4.5k
0
votes
0
replies
860
views
Comment:
C: Using Parallel GNU
4.0 years ago by
ole.tange
★ 4.5k
1
vote
0
replies
148k
views
Answer:
A: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
4.0 years ago by
ole.tange
★ 4.5k
3
votes
0
replies
1.5k
views
Answer:
A: Is there anyway to get a unix parallel command to write to standard output
4.1 years ago by
ole.tange
★ 4.5k
3
votes
0
replies
9.7k
views
Answer:
A: GNU parallel command with several multiple arguments
4.3 years ago by
ole.tange
★ 4.5k
1
vote
0
replies
11k
views
Comment:
C: Bulk download of entire BioProject SRA
4.3 years ago by
ole.tange
★ 4.5k
2
votes
0
replies
1.5k
views
Answer:
A: How to set sleep in GNU parallel in a esearch/efetch script
4.3 years ago by
ole.tange
★ 4.5k
1
vote
0
replies
4.3k
views
Answer:
A: How do I use bash loop to map with Salmon on files in multiple folders
4.4 years ago by
ole.tange
★ 4.5k
3
votes
0
replies
148k
views
Comment:
C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 4.7 years ago by
Ram
44k • written 10.3 years ago by
ole.tange
★ 4.5k
0
votes
0
replies
148k
views
Comment:
C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 4.7 years ago by
Ram
44k • written 9.6 years ago by
ole.tange
★ 4.5k
0
votes
0
replies
148k
views
Comment:
C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 4.7 years ago by
Ram
44k • written 9.9 years ago by
ole.tange
★ 4.5k
0
votes
0
replies
148k
views
Comment:
C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 4.7 years ago by
Ram
44k • written 9.5 years ago by
ole.tange
★ 4.5k
0
votes
1
reply
6.0k
views
Comment:
C: How to rename multiple fastq files
4.8 years ago by
ole.tange
★ 4.5k
0
votes
0
replies
148k
views
Comment:
C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 5.0 years ago by
Ram
44k • written 10.0 years ago by
ole.tange
★ 4.5k
2
votes
1
reply
148k
views
Comment:
C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 5.0 years ago by
Ram
44k • written 11.8 years ago by
ole.tange
★ 4.5k
0
votes
0
replies
148k
views
Answer:
A: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
5.1 years ago by
ole.tange
★ 4.5k
7
votes
1
reply
2.3k
views
Answer:
A: Calculating Shannon entropy for RNA sequences in multi-fasta using rnaentropy
updated 5.1 years ago by
zx8754
12k • written 5.1 years ago by
ole.tange
★ 4.5k
2
votes
0
replies
9.5k
views
Comment:
C: Most effective way to merge individual VCF files into VCF files merged by chromo
updated 5.2 years ago by
Ram
44k • written 10.6 years ago by
ole.tange
★ 4.5k
1
vote
0
replies
7.3k
views
Comment:
C: Multiple Bam To Multiple Sam
updated 5.2 years ago by
Ram
44k • written 11.7 years ago by
ole.tange
★ 4.5k
1
vote
0
replies
4.8k
views
Answer:
A: bwa mem: fail to locate the index files
5.4 years ago by
ole.tange
★ 4.5k
3
votes
1
reply
4.1k
views
Answer:
A: using GNU parallel for bwa mem and samtools
5.4 years ago by
ole.tange
★ 4.5k
1
vote
0
replies
148k
views
Comment:
C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
5.7 years ago by
ole.tange
★ 4.5k
0
votes
0
replies
3.8k
views
Comment:
C: How to extract filename and change text in the same file
5.7 years ago by
ole.tange
★ 4.5k
0
votes
2
replies
3.8k
views
Comment:
C: How to extract filename and change text in the same file
5.7 years ago by
ole.tange
★ 4.5k
2
votes
0
replies
148k
views
Answer:
A: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
5.8 years ago by
ole.tange
★ 4.5k
0
votes
0
replies
148k
views
Comment:
C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
5.8 years ago by
ole.tange
★ 4.5k
2
votes
1
reply
11k
views
Comment:
C: How to speed up trimming using trim galorer
5.9 years ago by
ole.tange
★ 4.5k
0
votes
0
replies
2.4k
views
Comment:
C: How to run SNPEff jar for a batch of VCF files using GNU parallel tool?
6.0 years ago by
ole.tange
★ 4.5k
13
votes
0
replies
3.0k
views
Tool:
Book: GNU Parallel 2018 - for beginners and advanced users
parallel
ngs
updated 17 months ago by
Ram
44k • written 6.1 years ago by
ole.tange
★ 4.5k
0
votes
0
replies
2.3k
views
Comment:
C: how to add the sample name to the end read headers
6.3 years ago by
ole.tange
★ 4.5k
0
votes
1
reply
1.8k
views
Answer:
A: HOMER parallel annotation for big .bed file
6.4 years ago by
ole.tange
★ 4.5k
0
votes
0
replies
8.7k
views
Comment:
C: Trim_galore on multiple fast.qz files: syntax problem
6.4 years ago by
ole.tange
★ 4.5k
1
vote
1
reply
8.7k
views
Answer:
A: Trim_galore on multiple fast.qz files: syntax problem
6.4 years ago by
ole.tange
★ 4.5k
5
votes
2
replies
9.0k
views
Answer:
A: GNU parallel error: Command line too long
6.5 years ago by
ole.tange
★ 4.5k
113 results • Page
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