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360
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Tool: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
parallel next-gen ngs
5 weeks ago by ole.tange ★ 4.3k
0
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0
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138k
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Answer: Answer: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
5 weeks ago by ole.tange ★ 4.3k
2
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0
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715
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Answer: Answer: How do I use GNU parallel with two inputs?
7 weeks ago by ole.tange ★ 4.3k
1
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0
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715
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Comment: Comment: How do I use GNU parallel with two inputs?
7 weeks ago by ole.tange ★ 4.3k
1
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0
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641
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Comment: Comment: Problem adding file names to fasta headers in multiple directories using awk
7 months ago by ole.tange ★ 4.3k
2
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0
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642
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Answer: Answer: Automating pipeline with Parallel, read files in separate folders
11 months ago by ole.tange ★ 4.3k
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0
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1.6k
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Comment: Comment: why do i get this gnu parallel warning (Trimmomatic/Bowtie2)
18 months ago by ole.tange ★ 4.3k
1
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1
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1.6k
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Comment: Comment: why do i get this gnu parallel warning (Trimmomatic/Bowtie2)
18 months ago by ole.tange ★ 4.3k
1
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0
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1.3k
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Comment: Comment: Help understanding "sed" command in a loop
18 months ago by ole.tange ★ 4.3k
0
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1
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789
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Answer: Answer: Unicycler and GNU parallel
21 months ago by ole.tange ★ 4.3k
0
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1
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402
views
Determine where an interleaved FASTQ record starts
fastq
updated 22 months ago by 21k • written 22 months ago by ★ 4.3k
1
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2
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1.6k
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Answer: A: Using GNU parallel to speed up merging VCFs with bcftools
2.3 years ago by ole.tange ★ 4.3k
1
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1
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1.5k
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Comment: C: concatenate all the files with matching prefix in a directory of several files
2.3 years ago by ole.tange ★ 4.3k
1
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0
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1.5k
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Answer: A: concatenate all the files with matching prefix in a directory of several files
2.3 years ago by ole.tange ★ 4.3k
4
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3
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2.1k
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Answer: A: Is it possible to run haplotypecaller in gnu parallel ?
2.4 years ago by ole.tange ★ 4.3k
0
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1
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2.1k
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Comment: C: Is it possible to run haplotypecaller in gnu parallel ?
2.4 years ago by ole.tange ★ 4.3k
0
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0
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546
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Comment: C: Using Parallel GNU
2.4 years ago by ole.tange ★ 4.3k
1
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0
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138k
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Answer: A: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
2.5 years ago by ole.tange ★ 4.3k
3
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0
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978
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Answer: A: Is there anyway to get a unix parallel command to write to standard output
2.5 years ago by ole.tange ★ 4.3k
3
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0
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5.7k
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Answer: A: GNU parallel command with several multiple arguments
2.8 years ago by ole.tange ★ 4.3k
0
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0
replies
7.5k
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Comment: C: Bulk download of entire BioProject SRA
2.8 years ago by ole.tange ★ 4.3k
2
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0
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994
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Answer: A: How to set sleep in GNU parallel in a esearch/efetch script
2.8 years ago by ole.tange ★ 4.3k
1
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0
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3.0k
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Answer: A: How do I use bash loop to map with Salmon on files in multiple folders
2.9 years ago by ole.tange ★ 4.3k
3
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0
replies
138k
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Comment: C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 3.2 years ago by 39k • written 8.7 years ago by ★ 4.3k
0
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0
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Comment: C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 3.2 years ago by 39k • written 8.0 years ago by ★ 4.3k
0
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0
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138k
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Comment: C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 3.2 years ago by 39k • written 8.4 years ago by ★ 4.3k
0
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0
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138k
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Comment: C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 3.2 years ago by 39k • written 7.9 years ago by ★ 4.3k
0
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1
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3.9k
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Comment: C: How to rename multiple fastq files
3.3 years ago by ole.tange ★ 4.3k
0
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0
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138k
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Comment: C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 3.5 years ago by 39k • written 8.4 years ago by ★ 4.3k
2
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1
reply
138k
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Comment: C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 3.5 years ago by 39k • written 10.3 years ago by ★ 4.3k
0
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0
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138k
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Answer: A: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
3.6 years ago by ole.tange ★ 4.3k
7
votes
1
reply
1.5k
views
Answer: A: Calculating Shannon entropy for RNA sequences in multi-fasta using rnaentropy
updated 3.6 years ago by 11k • written 3.6 years ago by ★ 4.3k
2
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0
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8.5k
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Comment: C: Most effective way to merge individual VCF files into VCF files merged by chromo
updated 3.6 years ago by 39k • written 9.0 years ago by ★ 4.3k
1
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0
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6.1k
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Comment: C: Multiple Bam To Multiple Sam
updated 3.6 years ago by 39k • written 10.2 years ago by ★ 4.3k
1
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0
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3.9k
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Answer: A: bwa mem: fail to locate the index files
3.8 years ago by ole.tange ★ 4.3k
3
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1
reply
2.8k
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Answer: A: using GNU parallel for bwa mem and samtools
3.8 years ago by ole.tange ★ 4.3k
1
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0
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138k
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Comment: C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
4.2 years ago by ole.tange ★ 4.3k
0
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0
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2.6k
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Comment: C: How to extract filename and change text in the same file
4.2 years ago by ole.tange ★ 4.3k
0
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2
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2.6k
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Comment: C: How to extract filename and change text in the same file
4.2 years ago by ole.tange ★ 4.3k
2
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0
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138k
views
Answer: A: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
4.2 years ago by ole.tange ★ 4.3k
0
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0
replies
138k
views
Comment: C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
4.3 years ago by ole.tange ★ 4.3k
2
votes
1
reply
7.8k
views
Comment: C: How to speed up trimming using trim galorer
4.4 years ago by ole.tange ★ 4.3k
0
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0
replies
2.0k
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Comment: C: How to run SNPEff jar for a batch of VCF files using GNU parallel tool?
4.4 years ago by ole.tange ★ 4.3k
13
votes
0
replies
2.4k
views
Tool: Book: GNU Parallel 2018 - for beginners and advanced users
tool ngs parallel Tool
4.6 years ago by ole.tange ★ 4.3k
0
votes
0
replies
1.3k
views
Comment: C: how to add the sample name to the end read headers
4.7 years ago by ole.tange ★ 4.3k
0
votes
1
reply
1.3k
views
Answer: A: HOMER parallel annotation for big .bed file
4.9 years ago by ole.tange ★ 4.3k
0
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0
replies
6.8k
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Comment: C: Trim_galore on multiple fast.qz files: syntax problem
4.9 years ago by ole.tange ★ 4.3k
1
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1
reply
6.8k
views
Answer: A: Trim_galore on multiple fast.qz files: syntax problem
4.9 years ago by ole.tange ★ 4.3k
5
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2
replies
6.4k
views
Answer: A: GNU parallel error: Command line too long
5.0 years ago by ole.tange ★ 4.3k
0
votes
1
reply
6.4k
views
Comment: C: GNU parallel error: Command line too long
5.0 years ago by ole.tange ★ 4.3k
112 results • Page 1 of 3
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