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2
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6
replies
4.1k
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DiffBind reports no significant differentially enriched peaks
ChIP-seq DiffBind
updated 2.1 years ago by • 0 • written 3.1 years ago by ▴ 810
0
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1
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1.1k
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Comment: Comment: Deseq2 colData for single condition
2.2 years ago by Marco Pannone ▴ 810
0
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0
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5.3k
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Comment: Comment: PolyA and PolyG sequences in FastQC/MultiQC report
2.2 years ago by Marco Pannone ▴ 810
0
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1
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1.5k
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Comment: Comment: Heatmap ChIP-seq average signal
2.2 years ago by Marco Pannone ▴ 810
1
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3
replies
1.5k
views
Heatmap ChIP-seq average signal
chip-seq heatmap deeptools
updated 2.2 years ago by ★ 1.9k • written 2.2 years ago by ▴ 810
0
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0
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2.8k
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Comment: Comment: Unusual pattern in heatmap from ChIP-seq
2.3 years ago by Marco Pannone ▴ 810
0
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1
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2.8k
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Comment: Comment: Unusual pattern in heatmap from ChIP-seq
2.3 years ago by Marco Pannone ▴ 810
0
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1
reply
2.8k
views
Comment: Comment: Unusual pattern in heatmap from ChIP-seq
2.3 years ago by Marco Pannone ▴ 810
0
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0
replies
2.8k
views
Comment: Comment: Unusual pattern in heatmap from ChIP-seq
2.3 years ago by Marco Pannone ▴ 810
0
votes
1
reply
2.8k
views
Comment: Comment: Unusual pattern in heatmap from ChIP-seq
2.3 years ago by Marco Pannone ▴ 810
0
votes
1
reply
2.8k
views
Comment: Comment: Unusual pattern in heatmap from ChIP-seq
2.3 years ago by Marco Pannone ▴ 810
1
vote
13
replies
2.8k
views
Unusual pattern in heatmap from ChIP-seq
chip-seq heatmap deeptools
2.3 years ago by Marco Pannone ▴ 810
0
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1
reply
1.5k
views
Comment: Comment: Extract gene coordinates UCSC Table Browser
2.3 years ago by Marco Pannone ▴ 810
0
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0
replies
1.5k
views
Comment: Comment: Extract gene coordinates UCSC Table Browser
2.3 years ago by Marco Pannone ▴ 810
0
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1
reply
1.5k
views
Comment: Comment: Extract gene coordinates UCSC Table Browser
2.3 years ago by Marco Pannone ▴ 810
2
votes
6
replies
1.5k
views
Extract gene coordinates UCSC Table Browser
ucsc table browser
updated 2.3 years ago by 154k • written 2.3 years ago by ▴ 810
0
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0
replies
2.6k
views
Comment: Comment: Active enhancers for mm39
2.6 years ago by Marco Pannone ▴ 810
0
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1
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2.6k
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Comment: Comment: Active enhancers for mm39
2.7 years ago by Marco Pannone ▴ 810
4
votes
6
replies
2.6k
views
Active enhancers for mm39
bed coordinates enhancers mm39
2.6 years ago by Marco Pannone ▴ 810
0
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1
reply
1.6k
views
Comment: Comment: Ensembl equivalent of refseq transcript fasta
2.7 years ago by Marco Pannone ▴ 810
0
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1
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2.0k
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Comment: Comment: Merge common elements in R
2.7 years ago by Marco Pannone ▴ 810
2
votes
1
reply
749
views
Distribution of DEGs according to gene length
distribution RNA-seq
updated 2.8 years ago by 45k • written 2.8 years ago by ▴ 810
1
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1
reply
2.2k
views
Comment: Comment: FPKM file differentilly gene anaylsis
2.9 years ago by Marco Pannone ▴ 810
2
votes
2
replies
1.3k
views
Statistic analysis on overlap between RNA-seq and ChIP-seq dataset
ChIP-seq RNA-seq
updated 3.0 years ago by 11k • written 3.0 years ago by ▴ 810
0
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1
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2.0k
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Comment: Comment: Any good tools for biological annotation of ChIP-seq broadpeak (H3K9me3, H3K27me
3.0 years ago by Marco Pannone ▴ 810
0
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1
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2.0k
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Comment: Comment: upload sc rna seq file into R
3.0 years ago by Marco Pannone ▴ 810
0
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1
reply
4.0k
views
Comment: Comment: DeSeq2 "some values in assay are negative"
3.0 years ago by Marco Pannone ▴ 810
1
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0
replies
1.5k
views
Comment: Comment: Quantifying Peak Height Difference in ATAC-seq
3.0 years ago by Marco Pannone ▴ 810
0
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1
reply
4.0k
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Comment: Comment: DeSeq2 "some values in assay are negative"
3.0 years ago by Marco Pannone ▴ 810
0
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1
reply
1.6k
views
Comment: Comment: minimum number of genes - gene ontology/reactome analysis
3.0 years ago by Marco Pannone ▴ 810
0
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1
reply
4.0k
views
Comment: Comment: DeSeq2 "some values in assay are negative"
3.0 years ago by Marco Pannone ▴ 810
0
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1
reply
1.6k
views
Comment: Comment: minimum number of genes - gene ontology/reactome analysis
3.0 years ago by Marco Pannone ▴ 810
3
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2
replies
2.8k
views
Answer: Answer: Multimapped reads in STAR alignment and subread::featureCounts()
3.0 years ago by Marco Pannone ▴ 810
0
votes
0
replies
773
views
Comment: Comment: Get pathways containing input genes; Reactome Database
3.1 years ago by Marco Pannone ▴ 810
1
vote
0
replies
974
views
Comment: Comment: Convert ENSEMBL peak coordinates to the UCSC
3.1 years ago by Marco Pannone ▴ 810
1
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1
reply
2.0k
views
Comment: Comment: DESeq2 calculate mean for each genotype
3.1 years ago by Marco Pannone ▴ 810
2
votes
1
reply
1.3k
views
Comment: Comment: How can I create a ciclo for in bash to merge each R1 fastq and R2 fastq in a si
3.1 years ago by Marco Pannone ▴ 810
0
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1
reply
4.7k
views
Comment: Comment: HTSeq-Count: no_feature too high?
3.1 years ago by Marco Pannone ▴ 810
0
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0
replies
4.7k
views
Comment: Comment: HTSeq-Count: no_feature too high?
3.1 years ago by Marco Pannone ▴ 810
0
votes
2
replies
4.7k
views
Comment: Comment: HTSeq-Count: no_feature too high?
3.1 years ago by Marco Pannone ▴ 810
0
votes
1
reply
4.7k
views
Comment: Comment: HTSeq-Count: no_feature too high?
3.1 years ago by Marco Pannone ▴ 810
2
votes
0
replies
4.2k
views
Comment: Comment: Should I merge my technical replicates for bulk RNA seq?
3.1 years ago by Marco Pannone ▴ 810
2
votes
3
replies
1.5k
views
Answer: Answer: Hisat2 doesn't map to all chomosomes
3.1 years ago by Marco Pannone ▴ 810
1
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1
reply
1.7k
views
Comment: Comment: Interpreting GSEA results (Plots)?
3.1 years ago by Marco Pannone ▴ 810
0
votes
0
replies
858
views
Comment: Comment: HTseq error and 0kb output file
3.1 years ago by Marco Pannone ▴ 810
0
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1
reply
1.4k
views
Comment: Comment: How to find DEG with deseq2 in R
3.1 years ago by Marco Pannone ▴ 810
1
vote
0
replies
1.8k
views
Comment: Comment: Venn Diagram output is missing
3.1 years ago by Marco Pannone ▴ 810
0
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1
reply
1.6k
views
Comment: Comment: Change window size in wiggle file.
3.1 years ago by Marco Pannone ▴ 810
0
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0
replies
1.8k
views
Comment: Comment: Handling Multiple Sequencing Runs in scRNA-seq
3.1 years ago by Marco Pannone ▴ 810
0
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1
reply
1.6k
views
Answer: Answer: Change window size in wiggle file.
3.1 years ago by Marco Pannone ▴ 810
194 results • Page 1 of 4
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