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questions
3
votes
8
replies
5.7k
views
bedtools getfasta does not give a proper fasta output
fasta
bedtools
updated 22 months ago by
Ram
44k • written 9.1 years ago by
Rohit
★ 1.5k
1
vote
3
replies
3.2k
views
How can we extract the alignment coordinates and gap coordinates in BLAT PSL?
Blat
sequence-alignment
updated 2.0 years ago by
Ram
44k • written 9.2 years ago by
Rohit
★ 1.5k
8
votes
4
replies
3.0k
views
How do denovo genome/transcriptome assemblers treat ambiguous bases?
NGS
Transcriptome-assembly
Genome-assembly
denovo
updated 2.3 years ago by
Ram
44k • written 9.5 years ago by
Rohit
★ 1.5k
3
votes
9
replies
4.1k
views
How Does Merging The Multiple Replicate Data Of A Single Genome Affect The Genome Assembly
genome
assembly
ngs
contigs
updated 10.0 years ago by
Biostar
20 • written 10.7 years ago by
Rohit
★ 1.5k
2
votes
17
replies
4.4k
views
Problem With Sam To Bam Converison After Alignment Of Scaffolds To Reference
sam
bam
alignment
samtools
updated 10.4 years ago by
Devon Ryan
104k • written 10.4 years ago by
Rohit
★ 1.5k
13
votes
8
replies
10k
views
Compare A Denovo Assembly To The Reference Genome
comparison
ngs
denovo
reference
updated 10.5 years ago by
Buttonwood
▴ 40 • written 10.5 years ago by
Rohit
★ 1.5k
7
votes
9
replies
4.4k
views
Paired-End Overlapping With Error Correction - Which Is Better?
ngs
genome
10.6 years ago by
Rohit
★ 1.5k
5
votes
4
replies
6.2k
views
Is It A Good Idea To Trim Rna-Seq Reads Or Just Remove N'S?
rna-seq
trimming
filter
updated 10.7 years ago by
Mikael Huss
4.8k • written 10.7 years ago by
Rohit
★ 1.5k
18
votes
11
replies
12k
views
Best Hits From Blast Tabular Output Of Multiple-Queries
statistics
blast
updated 15 months ago by
Ram
44k • written 11.4 years ago by
Rohit
★ 1.5k
9 results • Page
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