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Comment: C: What is the best way to make a bam file smaller by removing unwanted information
updated 3.1 years ago by 37k • written 7.1 years ago by ▴ 630
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Comment: C: NGS Data Storage Best Practices (Clinical)
3.1 years ago by Robert Sicko ▴ 630
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2.2k
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Comment: C: NGS Data Storage Best Practices (Clinical)
3.1 years ago by Robert Sicko ▴ 630
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0
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6.6k
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Answer: A: Error When Merging Vcfs With Vcftools'S Vcf-Merge Function
updated 3.1 years ago by 37k • written 9.7 years ago by ▴ 630
4
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6
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2.2k
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Forum: NGS Data Storage Best Practices (Clinical)
NGS storage clinical Forum
updated 3.2 years ago by 125k • written 3.2 years ago by ▴ 630
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6.5k
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Answer: A: GenomeStudio genotype format to VCF?
updated 3.2 years ago by 37k • written 7.2 years ago by ▴ 630
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1.2k
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Comment: C: How to create a tab delimited file?
3.9 years ago by Robert Sicko ▴ 630
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2
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1.9k
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Comment: C: Calling CFTR Poly TG/Poly T Genotype
3.9 years ago by Robert Sicko ▴ 630
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2
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1.9k
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Comment: C: Calling CFTR Poly TG/Poly T Genotype
3.9 years ago by Robert Sicko ▴ 630
3
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8
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1.9k
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Calling CFTR Poly TG/Poly T Genotype
NGS alignment
updated 3.9 years ago by 8.2k • written 4.0 years ago by ▴ 630
1
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0
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1.9k
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Answer: A: Calling CFTR Poly TG/Poly T Genotype
3.9 years ago by Robert Sicko ▴ 630
0
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0
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3.4k
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Comment: C: Estimating cross contamination in a set of BAMS
4.6 years ago by Robert Sicko ▴ 630
1
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1
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4.4k
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Comment: C: BWA mem running extremely slow
5.2 years ago by Robert Sicko ▴ 630
1
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1
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1.5k
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Answer: A: Finding Gaps in Targeted NGS Coverage Incorporating Replicates
5.2 years ago by Robert Sicko ▴ 630
2
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5
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1.5k
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Finding Gaps in Targeted NGS Coverage Incorporating Replicates
pandas awk ngs python bedtools
5.2 years ago by Robert Sicko ▴ 630
0
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1
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1.5k
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Comment: C: Finding Gaps in Targeted NGS Coverage Incorporating Replicates
5.2 years ago by Robert Sicko ▴ 630
5
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1
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8.2k
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Answer: A: Extracting 5'UTR and 3'UTR bed files from gtf file
5.2 years ago by Robert Sicko ▴ 630
0
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1
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1.5k
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Locus Reference Genomic (LRG) GTF
LRG clinical genomics NGS GTF bed
5.3 years ago by Robert Sicko ▴ 630
0
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0
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1.5k
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Answer: A: Locus Reference Genomic (LRG) GTF
5.3 years ago by Robert Sicko ▴ 630
0
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0
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3.2k
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Comment: C: Contamination of human DNA in genome sequencing data. How to detect and eliminat
5.3 years ago by Robert Sicko ▴ 630
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1
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3.2k
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Comment: C: Contamination of human DNA in genome sequencing data. How to detect and eliminat
5.3 years ago by Robert Sicko ▴ 630
1
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0
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4.7k
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Comment: C: Amplicon sequencing: how to handle adapters and primers?
5.4 years ago by Robert Sicko ▴ 630
2
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0
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4.7k
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Answer: A: Amplicon sequencing: how to handle adapters and primers?
5.4 years ago by Robert Sicko ▴ 630
16
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22
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12k
views
10 follow
Renaming All Files In A Directory With A Perl Script
perl linux
updated 5.4 years ago by • 0 • written 9.0 years ago by ▴ 630
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2
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3.7k
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Comment: C: NGS data storage and management
5.4 years ago by Robert Sicko ▴ 630
1
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0
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1.2k
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Answer: A: Strip primer sequences from sequencing reads
5.5 years ago by Robert Sicko ▴ 630
1
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0
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5.8k
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Comment: C: show vcf data in a table
5.7 years ago by Robert Sicko ▴ 630
0
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0
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3.5k
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Answer: A: GATK - gene panel VCF - too many variants - how to filter out
5.7 years ago by Robert Sicko ▴ 630
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0
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3.0k
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Comment: C: SnpSift command query
6.0 years ago by Robert Sicko ▴ 630
1
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2
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3.0k
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Answer: A: SnpSift command query
6.0 years ago by Robert Sicko ▴ 630
5
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1
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2.4k
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Answer: A: Bioinformatics in a clinical diagnostic setting versus research (academia)
6.1 years ago by Robert Sicko ▴ 630
2
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0
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2.0k
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Functional annotation of network of gene-sets
cytoscape network gene-set
updated 6 months ago by 37k • written 7.2 years ago by ▴ 630
0
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0
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1.8k
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Comment: C: QC on samples in a targeted NGS experiment
7.9 years ago by Robert Sicko ▴ 630
1
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2
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1.8k
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QC on samples in a targeted NGS experiment
qc ngs haloplex
updated 9 months ago by 37k • written 7.9 years ago by ▴ 630
0
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0
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3.0k
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Comment: Comment: BWA mem alignment taking a while in a virtual machine
updated 10 months ago by 37k • written 8.0 years ago by ▴ 630
1
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2
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3.0k
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BWA mem alignment taking a while in a virtual machine
alignment next-gen bwa
updated 10 months ago by 37k • written 8.0 years ago by ▴ 630
3
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0
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2.4k
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Answer: Answer: Question in Database of Genomic variants
updated 10 months ago by 37k • written 8.1 years ago by ▴ 630
0
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1
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3.7k
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Answer: Answer: PennCNV and segfault error
updated 11 months ago by 37k • written 8.1 years ago by ▴ 630
0
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1
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1.6k
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Determine if a gene is involved in a specific developmental process
text-mining CNV python
updated 11 months ago by 37k • written 8.2 years ago by ▴ 630
2
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0
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3.6k
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Answer: A: New Bioinformatics Courses At Cousera
8.3 years ago by Robert Sicko ▴ 630
3
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1
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4.7k
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Answer: Answer: Database/ list of Common CNVs in humans
updated 12 months ago by 37k • written 8.4 years ago by ▴ 630
0
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0
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1.6k
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Answer: Answer: follow-up on a significant variant/Gene
updated 12 months ago by 37k • written 8.4 years ago by ▴ 630
0
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1
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7.6k
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Comment: C: Gemini: Integrative Exploration Of Genetic Variation And Genome Annotations
8.4 years ago by Robert Sicko ▴ 630
1
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1
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8.5k
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Answer: A: Variant callers for Ion Torrent data?
8.4 years ago by Robert Sicko ▴ 630
1
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0
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2.5k
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Answer: Answer: How can I confirm structural variation is correct?
updated 13 months ago by 37k • written 8.5 years ago by ▴ 630
2
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1
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5.9k
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Answer: A: Practice Of Filtering Vcf Files (From Gatk)
9.0 years ago by Robert Sicko ▴ 630
0
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0
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5.9k
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Comment: C: Practice Of Filtering Vcf Files (From Gatk)
9.0 years ago by Robert Sicko ▴ 630
0
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0
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12k
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Comment: C: Renaming All Files In A Directory With A Perl Script
9.0 years ago by Robert Sicko ▴ 630
0
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1
reply
12k
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Comment: C: Renaming All Files In A Directory With A Perl Script
9.0 years ago by Robert Sicko ▴ 630
0
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1
reply
12k
views
Comment: C: Renaming All Files In A Directory With A Perl Script
9.0 years ago by Robert Sicko ▴ 630
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