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Comment: Comment: Jensen-Shannon Divergence (Capra and Singh, 2007) scored with substitution matri
5 months ago by Jonathan Lefebre ▴ 70
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2
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390
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Jensen-Shannon Divergence (Capra and Singh, 2007) scored with substitution matrix for conservation score
multiple-sequence-alignment conservation
updated 5 months ago by 41k • written 5 months ago by ▴ 70
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581
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Answer: Answer: Need help using Biopython
5 months ago by Jonathan Lefebre ▴ 70
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0
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4.9k
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Comment: Comment: Getting Pairwise Sequence Alignment Score With Biopython
6 months ago by Jonathan Lefebre ▴ 70
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1
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4.9k
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Answer: Answer: Getting Pairwise Sequence Alignment Score With Biopython
6 months ago by Jonathan Lefebre ▴ 70
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0
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216
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Considering gaps in calculating conservation score from MSA
multiple alignment sequence conservation python
6 months ago by Jonathan Lefebre ▴ 70
3
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2
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735
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Filtering AA sequences of PDB structures by sequence identity
identity python sequence
updated 17 months ago by ★ 25k • written 17 months ago by ▴ 70
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2.8k
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Comment: Comment: Splitting several PDB files into chains and save as separate files
21 months ago by Jonathan Lefebre ▴ 70
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4
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2.8k
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Splitting several PDB files into chains and save as separate files
biology python PDB structural biopython
updated 21 months ago by ★ 1.8k • written 21 months ago by ▴ 70
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1
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1.2k
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Comment: Comment: Iterating over several PDB files in ProDy module
2.1 years ago by Jonathan Lefebre ▴ 70
4
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4
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1.2k
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Iterating over several PDB files in ProDy module
python iteration Prody
updated 2.1 years ago by ★ 1.8k • written 2.1 years ago by ▴ 70
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2
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1.0k
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Filtering MSA by similiarity to a consensus sequence/motif
biopython motif multiple alignment MSA python sequence search
updated 2.3 years ago by 21k • written 2.3 years ago by ▴ 70
3
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1
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676
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Is reclustering of a cluster obtained from hierarchical clustering "allowed"?
analysis cluster hierarchical clustering
updated 2.3 years ago by ★ 2.9k • written 2.3 years ago by ▴ 70
1
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1
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654
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Retrieving Clusters from Clustermatrix, obtained with Hierarchical Clustering
seaborn python Hierarchical clustering
updated 2.3 years ago by ▴ 600 • written 2.3 years ago by ▴ 70
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6
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1.7k
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Measuring pairwise distances between residues/atoms in structural alignment of protein family
biopython protein alignment distance pairwise
updated 2.3 years ago by 21k • written 2.4 years ago by ▴ 70
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1
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1.7k
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Answer: Answer: Measuring pairwise distances between residues/atoms in structural alignment of p
2.4 years ago by Jonathan Lefebre ▴ 70
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0
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1.7k
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Comment: Comment: Measuring pairwise distances between residues/atoms in structural alignment of p
2.4 years ago by Jonathan Lefebre ▴ 70
0
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0
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443
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Measuring pairwise distances between pockets in structural alignment
biopython protein alignment distance pairwise
2.4 years ago by Jonathan Lefebre ▴ 70
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