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0
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DiffBind issue in identification of differentially enriched peaks between two conditions
DiffBind ChIP-Seq
7 weeks ago by accibio ▴ 20
1
vote
7
replies
508
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limma eBayes error in analysis of Illumina HumanHT-12 V4.0 expression beadchip data
R beadchip limma microarray Illumina
updated 8 weeks ago by ★ 1.2k • written 8 weeks ago by ▴ 20
0
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0
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631
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illuminaHumanv2.db returning NA for all Illumina probe ID to gene symbol conversion
microarray illumina R probe-annotation
12 months ago by accibio ▴ 20
4
votes
1
reply
785
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DESeq2 throwing error while normalizing raw microarray expression data due to presence of negative values
geo geoquery microarray normalization deseq2
updated 12 months ago by 82k • written 12 months ago by ▴ 20
0
votes
0
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442
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DAVID returning invalid KEGG pathways in gene enrichment analysis
kegg functional-annotation david gene-enrichment
2.2 years ago by accibio ▴ 20
2
votes
5
replies
6.6k
views
Converting an S4 object into a dataframe in R
dataframe r S4
updated 2.3 years ago by 82k • written 2.7 years ago by ▴ 20
2
votes
3
replies
1.2k
views
makeblastdb creating multiple files of unexpectedly large sizes
biopython BLAST makeblastdb refseq_protein FASTA
updated 2.3 years ago by 141k • written 2.3 years ago by ▴ 20
0
votes
1
reply
1.0k
views
Fastest way to perform BLAST search using a multi-FASTA file against a remote database
FASTA BLAST python biopython
updated 2.7 years ago by 141k • written 2.7 years ago by ▴ 20
3
votes
7
replies
2.6k
views
6 follow
Online BLAST search using R
BLAST R
updated 10 weeks ago by ▴ 140 • written 2.7 years ago by ▴ 20
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