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Comment: Comment: DESeq2 lfcshrink, shrinkage apeglm vs normal
6 months ago by joonhong kwon ▴ 70
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3
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937
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DESeq2 lfcshrink, shrinkage apeglm vs normal
DESeq2 RNA-seq DEG shrinkage
updated 6 months ago by 3.2k • written 6 months ago by ▴ 70
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0
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297
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Paired vs Unpaired t-test: Compositional analysis in the Human snRNA-seq data
snRNA-seq scRNA-seq analysis statistic compositional
7 months ago by joonhong kwon ▴ 70
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0
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436
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ambient RNA quality control in scRNA-seq
cellranger scRNA-seq QC seurat snRNA-seq
10 months ago by joonhong kwon ▴ 70
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527
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Trajectory analysis using Monocle3 with Seurat sub-clustering
scRNA-seq Trajectory Seurat analysis Monocle3
13 months ago by joonhong kwon ▴ 70
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3.1k
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Comment: Comment: Error in R: System command 'Rcmd.exe' failed
14 months ago by joonhong kwon ▴ 70
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2
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3.1k
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Error in R: System command 'Rcmd.exe' failed
CrossTalkeR package R Rcmd
14 months ago by joonhong kwon ▴ 70
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0
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379
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DEG analysis and cell number(proportion or frequency) comparison in scRNA-seq
scRNA-seq snRNA-seq DEG
16 months ago by joonhong kwon ▴ 70
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0
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623
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Comment: Comment: Why are some cells of Cell type A located in Cell type B in scRNA-seq clustering
16 months ago by joonhong kwon ▴ 70
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2
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623
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Why are some cells of Cell type A located in Cell type B in scRNA-seq clustering?
Clustering scRNA-seq snRNA-seq UMAP
16 months ago by joonhong kwon ▴ 70
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1.1k
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Comment: Comment: Pseudo-bulk DEG analysis with Multi-tissue in scRNA-seq
17 months ago by joonhong kwon ▴ 70
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1
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1.1k
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Comment: Comment: Pseudo-bulk DEG analysis with Multi-tissue in scRNA-seq
17 months ago by joonhong kwon ▴ 70
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1
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1.1k
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Comment: Comment: Pseudo-bulk DEG analysis with Multi-tissue in scRNA-seq
17 months ago by joonhong kwon ▴ 70
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6
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1.1k
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Pseudo-bulk DEG analysis with Multi-tissue in scRNA-seq
scRNA-seq Pseudo-bulk Seurat DEG DESeq2
17 months ago by joonhong kwon ▴ 70
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1.2k
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Comment: Comment: Limma Pairwise (Paired sample) DEG analysis
17 months ago by joonhong kwon ▴ 70
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2
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1.2k
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Limma Pairwise (Paired sample) DEG analysis
ttest Limma Paired DEG
17 months ago by joonhong kwon ▴ 70
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0
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577
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Comment: Comment: Single cell RNA-seq DEG analysis on multi-tissue
24 months ago by joonhong kwon ▴ 70
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2
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577
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Single cell RNA-seq DEG analysis on multi-tissue
DEG snRNA-seq scRNA-seq
24 months ago by joonhong kwon ▴ 70
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1.3k
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Comment: Comment: Two peak in histogram before single cell RNA-seq QC & Filtering
2.1 years ago by joonhong kwon ▴ 70
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1
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1.3k
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Comment: Comment: Two peak in histogram before single cell RNA-seq QC & Filtering
2.1 years ago by joonhong kwon ▴ 70
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5
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1.3k
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Two peak in histogram before single cell RNA-seq QC & Filtering
QC PBMC scRNAseq histogram
2.1 years ago by joonhong kwon ▴ 70
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1.3k
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Comment: Comment: Two peak in histogram before single cell RNA-seq QC & Filtering
2.1 years ago by joonhong kwon ▴ 70
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1
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3.8k
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Comment: Comment: DoubletFinder and Seurat integration
2.2 years ago by joonhong kwon ▴ 70
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3
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3.8k
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DoubletFinder and Seurat integration
DoubletFinder scRNAseq Seurat integration
updated 2.2 years ago by 82k • written 2.2 years ago by ▴ 70
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731
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Comment: Comment: About 'Estimated Number of cells' in snRNA-seq
2.3 years ago by joonhong kwon ▴ 70
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2
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731
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About 'Estimated Number of cells' in snRNA-seq
snRNA-seq scRNA-seq QC
2.3 years ago by joonhong kwon ▴ 70
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1
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8.7k
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Comment: Comment: seurat, subcluster and trajectory analysis (Monocle 3)
2.4 years ago by joonhong kwon ▴ 70
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4
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8.7k
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seurat, subcluster and trajectory analysis (Monocle 3)
scRNA-seq trajectory Monocle3 seurat
updated 17 months ago by ▴ 40 • written 2.4 years ago by ▴ 70
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1.4k
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Comment: Comment: Batch effect that is same as main factor
2.5 years ago by joonhong kwon ▴ 70
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0
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1.4k
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Comment: Comment: Batch effect that is same as main factor
2.5 years ago by joonhong kwon ▴ 70
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2
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1.4k
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Comment: Comment: Batch effect that is same as main factor
2.6 years ago by joonhong kwon ▴ 70
2
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6
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1.4k
views
Batch effect that is same as main factor
RNA-Seq effect batch brain
2.5 years ago by joonhong kwon ▴ 70
32 results • Page 1 of 1
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