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Comment: Comment: DESeq2 lfcshrink, shrinkage apeglm vs normal
11 months ago by joonhong kwon ▴ 70
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DESeq2 lfcshrink, shrinkage apeglm vs normal
DESeq2 RNA-seq DEG shrinkage
updated 11 months ago by 3.2k • written 11 months ago by ▴ 70
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374
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Paired vs Unpaired t-test: Compositional analysis in the Human snRNA-seq data
snRNA-seq scRNA-seq analysis statistic compositional
12 months ago by joonhong kwon ▴ 70
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550
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ambient RNA quality control in scRNA-seq
cellranger scRNA-seq QC seurat snRNA-seq
15 months ago by joonhong kwon ▴ 70
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656
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Trajectory analysis using Monocle3 with Seurat sub-clustering
scRNA-seq Trajectory Seurat analysis Monocle3
18 months ago by joonhong kwon ▴ 70
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3.6k
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Comment: Comment: Error in R: System command 'Rcmd.exe' failed
19 months ago by joonhong kwon ▴ 70
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3.6k
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Error in R: System command 'Rcmd.exe' failed
CrossTalkeR package R Rcmd
19 months ago by joonhong kwon ▴ 70
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0
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426
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DEG analysis and cell number(proportion or frequency) comparison in scRNA-seq
scRNA-seq snRNA-seq DEG
21 months ago by joonhong kwon ▴ 70
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721
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Comment: Comment: Why are some cells of Cell type A located in Cell type B in scRNA-seq clustering
22 months ago by joonhong kwon ▴ 70
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2
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721
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Why are some cells of Cell type A located in Cell type B in scRNA-seq clustering?
Clustering scRNA-seq snRNA-seq UMAP
22 months ago by joonhong kwon ▴ 70
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1.2k
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Comment: Comment: Pseudo-bulk DEG analysis with Multi-tissue in scRNA-seq
23 months ago by joonhong kwon ▴ 70
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1.2k
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Comment: Comment: Pseudo-bulk DEG analysis with Multi-tissue in scRNA-seq
23 months ago by joonhong kwon ▴ 70
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1.2k
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Comment: Comment: Pseudo-bulk DEG analysis with Multi-tissue in scRNA-seq
23 months ago by joonhong kwon ▴ 70
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6
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1.2k
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Pseudo-bulk DEG analysis with Multi-tissue in scRNA-seq
scRNA-seq Pseudo-bulk Seurat DEG DESeq2
23 months ago by joonhong kwon ▴ 70
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1.4k
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Comment: Comment: Limma Pairwise (Paired sample) DEG analysis
23 months ago by joonhong kwon ▴ 70
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2
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1.4k
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Limma Pairwise (Paired sample) DEG analysis
ttest Limma Paired DEG
23 months ago by joonhong kwon ▴ 70
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0
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665
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Comment: Comment: Single cell RNA-seq DEG analysis on multi-tissue
2.4 years ago by joonhong kwon ▴ 70
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2
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665
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Single cell RNA-seq DEG analysis on multi-tissue
DEG snRNA-seq scRNA-seq
2.4 years ago by joonhong kwon ▴ 70
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Comment: Comment: Two peak in histogram before single cell RNA-seq QC & Filtering
2.6 years ago by joonhong kwon ▴ 70
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1.5k
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Comment: Comment: Two peak in histogram before single cell RNA-seq QC & Filtering
2.6 years ago by joonhong kwon ▴ 70
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5
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1.5k
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Two peak in histogram before single cell RNA-seq QC & Filtering
QC PBMC scRNAseq histogram
2.6 years ago by joonhong kwon ▴ 70
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1.5k
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Comment: Comment: Two peak in histogram before single cell RNA-seq QC & Filtering
2.6 years ago by joonhong kwon ▴ 70
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4.4k
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Comment: Comment: DoubletFinder and Seurat integration
2.6 years ago by joonhong kwon ▴ 70
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3
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4.4k
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DoubletFinder and Seurat integration
DoubletFinder scRNAseq Seurat integration
updated 2.6 years ago by 84k • written 2.7 years ago by ▴ 70
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817
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Comment: Comment: About 'Estimated Number of cells' in snRNA-seq
2.8 years ago by joonhong kwon ▴ 70
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2
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817
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About 'Estimated Number of cells' in snRNA-seq
snRNA-seq scRNA-seq QC
2.8 years ago by joonhong kwon ▴ 70
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9.5k
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Comment: Comment: seurat, subcluster and trajectory analysis (Monocle 3)
2.8 years ago by joonhong kwon ▴ 70
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4
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9.5k
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seurat, subcluster and trajectory analysis (Monocle 3)
scRNA-seq trajectory Monocle3 seurat
updated 22 months ago by ▴ 40 • written 2.8 years ago by ▴ 70
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Comment: Comment: Batch effect that is same as main factor
3.0 years ago by joonhong kwon ▴ 70
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1.5k
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Comment: Comment: Batch effect that is same as main factor
3.0 years ago by joonhong kwon ▴ 70
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2
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1.5k
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Comment: Comment: Batch effect that is same as main factor
3.0 years ago by joonhong kwon ▴ 70
2
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6
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1.5k
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Batch effect that is same as main factor
batch-effect RNA-Seq
updated 6 weeks ago by 44k • written 3.0 years ago by ▴ 70
32 results • Page 1 of 1
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