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Comment: Comment: Only one node generated after using decision tree model on training data set
14 months ago by Mohamed Samir ▴ 30
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0
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394
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NO sequence type of bacteria revealed using mlst package
Assembly Sequencing Genomics
14 months ago by Mohamed Samir ▴ 30
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0
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1.1k
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Comment: Comment: Unable to retrieve the "Assembly method" of an assembly using Edirect in the ter
15 months ago by Mohamed Samir ▴ 30
3
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5
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1.1k
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Unable to retrieve the "Assembly method" of an assembly using Edirect in the terminal
Assembly Sequencing Genomics
15 months ago by Mohamed Samir ▴ 30
0
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1
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1.1k
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Comment: Comment: Unable to retrieve the "Assembly method" of an assembly using Edirect in the ter
15 months ago by Mohamed Samir ▴ 30
0
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0
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1.1k
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Comment: Comment: Only one node generated after using decision tree model on training data set
15 months ago by Mohamed Samir ▴ 30
0
votes
3
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1.1k
views
Only one node generated after using decision tree model on training data set
Machine-learning Decision-tree
14 months ago by Mohamed Samir ▴ 30
0
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1
reply
815
views
Unable to fetch fasta files of contigs using Edirect in Linux
edirect NCBI Whole-genome-sequencing
updated 15 months ago by 45k • written 15 months ago by ▴ 30
0
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1
reply
976
views
Empty txt file as an output of "seqkit stats" for multiple fastq files
NGS Linux
updated 15 months ago by 8.7k • written 15 months ago by ▴ 30
1
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2
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1.1k
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Surpsrisingly short reads in illumina 1.9 Miseq runs (2X300)
NGS
15 months ago by Mohamed Samir ▴ 30
0
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0
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1.1k
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Comment: Comment: Surpsrisingly short reads in illumina 1.9 Miseq runs (2X300)
15 months ago by Mohamed Samir ▴ 30
1
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3
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1.2k
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Error when looping over multiple columns in a data frame in R
Statistics R
updated 16 months ago by ▴ 930 • written 16 months ago by ▴ 30
0
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1
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1.2k
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Comment: Comment: Error when looping over multiple columns in a data frame in R
16 months ago by Mohamed Samir ▴ 30
0
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3
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944
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Error in using BioSampleParser tool: subscript out of bounds
R
updated 16 months ago by ▴ 180 • written 16 months ago by ▴ 30
0
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1
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944
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Comment: Comment: Error in using BioSampleParser tool: subscript out of bounds
16 months ago by Mohamed Samir ▴ 30
0
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0
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444
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Buzzled by retrieving metadata on bioprojects for an organism using "rentrez" package
R
updated 16 months ago by 166k • written 16 months ago by ▴ 30
0
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0
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436
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Confused about the results of a function in dada2 pipeline sample inference step
Microbiome R dada2
17 months ago by Mohamed Samir ▴ 30
0
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1
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1.3k
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Comment: Comment: No hits for influenza virus in an RNA seq. data using FAST Q screen (from babrah
23 months ago by Mohamed Samir ▴ 30
1
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3
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1.3k
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No hits for influenza virus in an RNA seq. data using FAST Q screen (from babraham institute)
alignment Linux mapping
updated 23 months ago by ▴ 420 • written 23 months ago by ▴ 30
2
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5
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1.4k
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6 follow
How to loop over certain files within a directory that belongs to certain samples
shell fastq
updated 2.1 years ago by 45k • written 2.1 years ago by ▴ 30
0
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0
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1.3k
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Try to understand better how to set out an effective sample size within the MetagenomSeq package in microbiome
Microbiome
updated 2.1 years ago by 45k • written 2.1 years ago by ▴ 30
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0
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1.4k
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Comment: Comment: calculating read depth via a for in loop over many fastq files ?
2.2 years ago by Mohamed Samir ▴ 30
0
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4
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1.4k
views
calculating read depth via a for in loop over many fastq files ?
Linux R bash
2.2 years ago by Mohamed Samir ▴ 30
0
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0
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1.4k
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Comment: Comment: How to create a series of descending string in a column in data frame in R
2.2 years ago by Mohamed Samir ▴ 30
2
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5
replies
1.4k
views
How to create a series of descending string in a column in data frame in R
R
updated 2.2 years ago by ★ 2.1k • written 2.2 years ago by ▴ 30
0
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1
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1.4k
views
Comment: Comment: How to create a series of descending string in a column in data frame in R
2.2 years ago by Mohamed Samir ▴ 30
1
vote
2
replies
2.6k
views
Salmon quant produced an error
Salmon Linux
updated 20 months ago by ▴ 10 • written 4.3 years ago by ▴ 30
4
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10
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3.3k
views
Sorting of a bam file takes toooo long time
linux bam
updated 2.5 years ago by 45k • written 4.3 years ago by ▴ 30
1
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1
reply
3.3k
views
Answer: Answer: Sorting of a bam file takes toooo long time
updated 4.3 years ago by 45k • written 4.3 years ago by ▴ 30
0
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2
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3.3k
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Comment: Comment: Sorting of a bam file takes toooo long time
4.3 years ago by Mohamed Samir ▴ 30
0
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1
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3.3k
views
Comment: Comment: Sorting of a bam file takes toooo long time
4.3 years ago by Mohamed Samir ▴ 30
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