Do you have any idea how to easy extract contigs from fasta file wich contains specific sequence?
>c1042 ACCGTACCC >c1043 GCTACAGTTGAAAGGGGACCGTACCC >c1044 ATGAATAAAATAATTTTGTATCATAAATCGAGCTGTTAATTATT >c1044 TTCATATTTGTAGCTAAGCAGAGGCGAAGCGTTCTTGTATCG
>c1042 ACCGTACCC >c1043 GCTACAGTTGAAAGGGGACCGTACCC
Thank you so much for any ideas and help.
Hello. Is there some way to do the same with biopython? Thanks
Please see @Devon Ryan answer for suggestions with biopython, or open a new question, with examples, and what you have tried.
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