One day when I will have the time and money I will pay for python lessons, course or whatever...I think is quiet important to learn that language to work as you want...
atm I just need something quiet easy. I know I can annotate with bcftools bed files on my vcf files, but in this case I want to add info on my csv files
I got this uniprot info (I just put an example)
CHR START END ACTIVE SITE chr1 1257123 1257126 Glycyl thioester intermediate. chr1 1309145 1309148 Nucleophile. chr1 1633785 1633788 active site_212-212. chr1 1704267 1704270 Proton acceptor. chr1 2172118 2172121 Proton acceptor.
and I would like to add the third column to this csv file
CHR POS chr1 1257123 chr1 1309146 chr1 1633787 chr1 1704269 chr1 2172118
so the result would be
CHR POS ACTIVE SITE chr1 1257123 Glycyl thioester intermediate chr1 1309146 Nucleophile. chr1 1633787 active site_212-212. chr1 1704269 Proton acceptor. chr1 2172118 Proton acceptor.
I know, probably is something really silly for all of you...
Is any tool make this job???