Tool: Introducing Skymap: Allelic read counts extracted from 250,000 human sequencing runs in Sequence Read Archive
8
gravatar for btsui
5 weeks ago by
btsui260
UCSD
btsui260 wrote:

Summary: extracted and reprocessed the allelic read counts for 250k published sequencing runs and merged the allelic read count profiles into a table which you can download and analyze.

Description and Code: https://github.com/brianyiktaktsui/Skymap/blob/master/README.md

Preprint: https://www.biorxiv.org/content/early/2018/08/07/386441

Data: https://www.synapse.org/#!Synapse:syn11415602/wiki/492470

A fun blog about why I did this project: https://brianyiktaktsui.wordpress.com/2018/08/07/skymap-project-a-preview/

Please feel free to leave comments. :)

tool rna-seq snp chip-seq • 483 views
ADD COMMENTlink modified 29 days ago • written 5 weeks ago by btsui260
2

You could include Skymap in place of Introducing in the title since that appears to be the name for your project.

ADD REPLYlink modified 5 weeks ago • written 5 weeks ago by genomax55k

Points taken, thanks !!

ADD REPLYlink written 5 weeks ago by btsui260
1

Is there any reason you keep bumping this to the front page? If everyone did this biostars would be a mess, so please use this feature responsibly.

ADD REPLYlink written 29 days ago by WouterDeCoster32k

If I am not mistaken, one of the moderators told me that bumping once per day is fine. If that is a problem, maybe you can email me directly to talk over the problem or clarify in the FAQ. Meanwhile, I will stop bumping the post. Hope this help.

ADD REPLYlink written 29 days ago by btsui260

I don't know who told you that but IMO that is not fine, not unless you're adding a good amount of content. We don't have the addressed in the FAQ because no one's tried that before.

ADD REPLYlink written 29 days ago by RamRS17k

I am sorry about this.

ADD REPLYlink written 29 days ago by btsui260

The post need not be deleted - just don't bump it again unless you're adding content and it gets bumped automatically because of the added content.

ADD REPLYlink written 29 days ago by RamRS17k

I had said that because you had tried to create a new post (with what looked like an attempt to post a tutorial for this tool but I was not certain). It was mainly to make you aware that instead of creating new posts with similar content it is possible to bump a thread up to main page by editing or adding content to the original post. Doing it every day for 2 weeks is not an appropriate use of that feature.

ADD REPLYlink modified 29 days ago • written 29 days ago by genomax55k
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