Question: RNA-secondary structure prediction software (T-boxes, riboswitches and attenuators search)
gravatar for natasha.sernova
12 months ago by
natasha.sernova3.6k wrote:

Dear all,

I think I’ve collected most of the available posts

from Biostars about RNA-secondary structure prediction software:

(T-boxes, riboswitches and attenuators search).

Most of them are 5-6 years old, but some are recent.

I hope someone else has made a better collection,

simply I didn’t find it. Please, help me!

This one, A: How We Can Get The Secondary And Tertiary Structure For Interest Of Rna

is very nice, but 5.3 years old.

Search in NCBI, for example, gives more than 2000

articles, but it’s impossible to look through all of them.

Thank you!!


RNA_secondary structure:

RNA secondary structure prediction

Secondary Structure Prediction software RNA/DNA

Finding Motif Representation Of A Given Secondary Structure Of Rna Sequence

How To Find Known Local Secondary Structures In Rna


Linear Or 2D Representation Of Protein Sequence Secondary Structure

RNA secondary structure - Feature extraction

hairpin, attenuators

Looking for hairpin loops

A: CNA vs mRNA Expression level

search for attenuator in RNA secondary structure

A: Efficient way to check pdb enzyme protein models with certain mutations if the a

attenuator riboswitch rna t-box • 573 views
ADD COMMENTlink modified 8 months ago • written 12 months ago by natasha.sernova3.6k

This is my question too. Is there a strategy for choosing RNA secondary structure prediction software? ...a lot of options

ADD REPLYlink modified 8 months ago • written 8 months ago by Sergey_Fin20

Sergey, thank you! I saw the article in WIKI, but I didn't

pay any attention to the references. They look useful.

ADD REPLYlink written 8 months ago by natasha.sernova3.6k

Oh, there are more tools! The right panel is really useful!

Programs for RNA secondary structure predictions

ADD REPLYlink written 8 months ago by natasha.sernova3.6k
gravatar for Sergey_Fin
8 months ago by
Sergey_Fin20 wrote:

RNA_secondary structure - (2017)

ADD COMMENTlink written 8 months ago by Sergey_Fin20
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