Showing: bowtiereset
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Bowtie2 alignment: Reads that aligned concordantly >1 times
bowtie2 alignment map bowtie score written 3.0 years ago by elfeusilva0 • updated 20 days ago by Biostar ♦♦ 20
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how is TLEN calculated in bowtie2
bowtie2 alignment sam tlen bowtie written 7 weeks ago by shim0 • updated 28 days ago by Biostar ♦♦ 20
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bowtie XA tag
bowtie written 8 weeks ago by biolab950
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Problem to align colorspace data in bowtie1
alignment colorspace bowtie rna-seq written 20 months ago by gufernandez1010 • updated 8 weeks ago by xiaoshen199309010
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Short sequence alignment with low alignment rate
alignment next-gen bowtie written 3 months ago by jesselee51670 • updated 10 weeks ago by Biostar ♦♦ 20
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Mapping onto the Transcriptome, RNA-seq
transcriptome rna-seq bowtie hisat2 written 10 weeks ago by asyndeton1710 • updated 10 weeks ago by Rob2.1k
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Keeping Tags That Are Mapped To The Same Place By Two Aligners
alignment bwa bowtie written 4.8 years ago by KCC3.8k • updated 3 months ago by Biostar ♦♦ 20
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Human+Viral Genomes In A Single Index (Bwa Or Other Aligners)
genome human bwa bowtie index written 5.9 years ago by Rm7.5k • updated 3 months ago by Biostar ♦♦ 20
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bed format, START always bigger than END, no matter which strand?
bed bowtie written 4 months ago by bxia100 • updated 4 months ago by Alex Reynolds20k
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Error with the seed (-l) argument in Bowtie
bowtie seed written 4 months ago by Chynoki0 • updated 4 months ago by h.mon8.7k
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to run bowtie on multiple fastq file
rna seq multiple fastq file bowtie written 19 months ago by kritika142470 • updated 4 months ago by Biostar ♦♦ 20
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shell script for bowtie/bwa alignment pair end reads
illumina fastq shell bwa bowtie written 2.7 years ago by Paul700 • updated 4 months ago by emad.albarouki0
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Bowtie & Tophat
tophat cufflinks bowtie written 4.4 years ago by k.nirmalraman890 • updated 6 months ago by mrmkanni930
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Threading Building Blocks library not found for bowtie
next-gen tbb bowtie sequencing written 6 months ago by jitendoshi20060 • updated 6 months ago by Devon Ryan70k
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TopHat vs Bowtie output differences
tophat rna-seq bowtie written 7 months ago by michael.dunne10 • updated 7 months ago by Nicolas Rosewick5.3k
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rna seq bowtie couldn't find index files
tophat rna-seq bowtie written 9 months ago by prasanthgopinathangs20 • updated 7 months ago by Biostar ♦♦ 20
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INDEL left alignment in bam and vcf
indel aligner bowtie bwa blasr written 7 months ago by mark.rose10 • updated 7 months ago by Brian Bushnell14k
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