Showing: bowtiereset
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Transcriptome analysis using tophat and bowtie
software error bowtieindex tophat bowtie written 6 days ago by NAVID.BAVI0 • updated 5 days ago by Ram17k
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How Do I Get Some Basic Counts From Readaligned?
short R bioconductor bowtie aligner written 8.4 years ago by Jeremy Leipzig17k • updated 14 days ago by Ram17k
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119
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Bowtie2 Alignment Score Meaning
rna-seq bowtie written 20 days ago by biogirl040 • updated 19 days ago by Devon Ryan84k
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Should --very-sensitive be combined with -no-1mm-upfront?
bowtie2 bowtie written 24 days ago by Lucy0 • updated 24 days ago by Devon Ryan84k
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How can I Rectify Segmentation fault: 11?
smrna mapping bowtie written 28 days ago by jaqx00830 • updated 27 days ago by h.mon19k
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Getting BAM files using Bowtie
software error assembly bowtie rna-seq mapping written 7 weeks ago by NAVID.BAVI0 • updated 7 weeks ago by h.mon19k
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STAR genome index with and/or with out *.gtf annotation
gtf alignment star rna-seq bowtie written 2.3 years ago by kirannbishwa01860 • updated 8 weeks ago by drskm70
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view Bowtie2 alignment results
alignment results bowtie written 9 weeks ago by lkianmehr10 • updated 9 weeks ago by h.mon19k
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218
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Tophat2 Error gzip pipe broken? zipped file empty?
tophat2 alignment rna-seq bowtie gzip written 10 weeks ago by biogirl040 • updated 10 weeks ago by h.mon19k
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unmapped reads in paired-end run pf bowtie2
paired-end bowtie unmapped-reads written 3 months ago by Assa Yeroslaviz1.1k • updated 12 weeks ago by Devon Ryan84k
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Low % of aligned reads
alignment galaxy rna-seq bowtie written 4 months ago by kml20 • updated 4 months ago by Vijay Lakhujani3.0k
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Benchmarking single SNP mapping
snps bowtie wgsim bwa mapping written 4 months ago by Josh Herr5.6k • updated 4 months ago by Biostar ♦♦ 20
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Questions about STAR and Bowtie (not Bowtie2) mapping
bowtie star uniquely mapped reads rna-seq written 5 months ago by debitboro90 • updated 5 months ago by Ram17k
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bowtie problem: cannot locate bowtie index
bowtie written 3.7 years ago by biolab1.0k • updated 5 months ago by Biostar ♦♦ 20
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Reducing error bars on TopHat RNA expression analysis
R tophat rna-seq bowtie written 9 months ago by waterspring0 • updated 5 months ago by Biostar ♦♦ 20
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Bowtie alignment using RY format as reference
fastq alignment bowtie written 5 months ago by Nalini10 • updated 5 months ago by Pierre Lindenbaum112k
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Bowtie2 mapping did not finish, can I still use the .sam file?
bowtie2 bowtie written 6 months ago by jon.brate190 • updated 6 months ago by WouterDeCoster32k
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