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<prev • 55 results • page 1 of 2 • next >
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sequence distance to consensus shorter than within NJ tree?
sequence distance dating written 4 months ago by tenax • 0
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4
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536
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8 follow
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Similarity between two FASTA files
similarity distance written 6 months ago by rmf • 540
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Variant distance bias (VDB) in VCF format: how to compute properly?
vcf vdb variant distance bias written 9 months ago by Macspider • 2.7k
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6 follow
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Mafft Output Distance Matrix
phylogenetics alignment distance written 7.9 years ago by Gabriel Mitchell • 520 • updated 12 months ago by Ghoti • 40
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dist.alignment vs dist.dna for DNA distance calculation
R ape seqinr distance dna written 3.0 years ago by rimjhim.roy.ch • 70 • updated 14 months ago by sagitaninta • 0
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Script for Gene Clustering.
gene cluster merge distance written 21 months ago by talalamin • 0 • updated 21 months ago by Ben • 50
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6 follow
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Compute Genetic Map
genetics map distance written 9.0 years ago by Pierre • 480 • updated 21 months ago by Biostar ♦♦ 20
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5 follow
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Removing Redundant Amino Acid Sequences From Fasta - Tools And Algorithms
fasta sequence distance written 8.2 years ago by Jacek • 100 • updated 24 months ago by Eslam Samir • 100
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Estimating genetics distance with python prgram
python distance program code divergence written 2.0 years ago by enrightnm • 0
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Neighbor Joining And Distance
alignment distance written 5.6 years ago by rmoenree • 0 • updated 2.0 years ago by minacom_84 • 0
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R package: a circular plot for genetic distance.
R genes distance circular genetic written 2.1 years ago by Baptiste • 90 • updated 2.1 years ago by Biostar ♦♦ 20
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Genetic Distance Versus Physical Distance
distance written 5.1 years ago by Adrian Pelin • 2.2k • updated 2.2 years ago by panly89 • 10
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How to determine the average distance between known motif in a list of DNA sequences
R sequence motif distance written 2.4 years ago by kevinm • 30 • updated 2.3 years ago by Macherki M E • 120
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7 follow
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Splicing Definition
splicing mutation distance written 7.4 years ago by Liyf • 290 • updated 2.5 years ago by Biostar ♦♦ 20
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2.8k
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Script to list residues within a given distance from ligand
binding site protein ligand distance residues written 2.9 years ago by miromoman • 10 • updated 2.8 years ago by wpwupingwp • 110
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Newick To Distance Matrix
matrix newick tree distance written 4.9 years ago by Haluk • 170 • updated 3.1 years ago by Biostar ♦♦ 20
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OTU distances and assumptions
otu phylogenetics scoring distance clustering written 3.3 years ago by jnf3769 • 40
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1
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Distance between Position weight matrices using a substitution matrix
pwm substitution matrix distance written 3.7 years ago by marco23.p • 0 • updated 3.7 years ago by Jean-Karim Heriche ♦ 18k
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9 follow
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Script To Calculate A Distance Matrix Based On Tree File
matrix phylogenetics tree distance written 7.9 years ago by Arjen Ten Have • 340 • updated 3.8 years ago by guanhomer • 20
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Evolutionary distance models
model evolution distance written 3.9 years ago by samuel.zachej • 20
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Clustering based on Alignment
genomic coordinates bowtie distance rna-seq written 4.0 years ago by ilyco • 50 • updated 4.0 years ago by Biostar ♦♦ 20
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5 follow
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Compute Affinity Matrix From Distance Matrix
multiple-alignment clustalw protein distance written 5.8 years ago by ericmajinglong • 100 • updated 4.2 years ago by Jean-Karim Heriche ♦ 18k
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VCF + Phylogenetic tree : how to calculate the distance between two set of samples
vcf phylogenetic tree distance written 4.2 years ago by Pierre Lindenbaum ♦ 116k • updated 4.2 years ago by Jeremy Leipzig ♦ 18k
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Distance between two gene sets
gene-set distance written 4.3 years ago by The • 100
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bigwig : peak distance from specific genomic region
chip-seq bigwig distance closest bed written 4.6 years ago by Nicolas Rosewick ♦ 7.3k • updated 4.4 years ago by Biostar ♦♦ 20
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5 follow
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Which cut-off for collapsing this tree?
homology distance orthology collapse newick written 4.8 years ago by a1ultima • 700 • updated 4.8 years ago by Asaf ♦ 5.2k
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3
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3.6k
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6 follow
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Collapse Clades In A Newick Tree With Average Distance To Tips < X
phylogeny tree distance written 4.9 years ago by a1ultima • 700
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Convert Distance Matrix To Newick Format- Biopython
python phylogenetics distance written 5.0 years ago by asmariyaz23 • 10 • updated 5.0 years ago by jhc • 2.8k
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2.7k
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5 follow
1
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Centimorgan Values For Snps In Dbsnp132 And Higher?
snp distance written 6.8 years ago by Avariant • 40 • updated 5.1 years ago by Biostar ♦♦ 20
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How To Find The Closest Distance From Bed Files Between Genes And Repeats That Are Upstream
bedtools bed distance written 5.1 years ago by roll • 240 • updated 5.1 years ago by Alex Reynolds ♦ 27k
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