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6
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salmon was only able to assign 0 fragments to transcripts
windows10 salmon docker rna-seq written 23 days ago by naseerkhan861 • 0 • updated 23 days ago by yztxwd • 170
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96
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Tool: Compi: Application Framework for Portable Computational Pipelines
workflow management system pipeline docker tool written 26 days ago by Hugo • 150
0
votes
1
answer
121
views
1
answer
How to run Picard docker image
alignment next-gen picard docker written 6 weeks ago by elcortegano • 10
1
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197
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Job: Research Associate in Genomics Pipelines @ UEA, Norwich, UK
docker cancer job ngs bioinformatics pipelines written 4 months ago by dan.brewer • 70
4
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1
answer
361
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1
answer
CWL docker command user
cwl-runner cwl docker written 5 months ago by dganiewich • 90 • updated 5 months ago by Tom • 520
2
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0
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231
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How does bbduk calculate it's memory requirements?
bbduk docker memory written 5 months ago by Lina F • 160
0
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1
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223
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1
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How to mount my data into docker container through -v command?
container docker rna-seq bash scripting written 6 months ago by F. Golestan • 20
0
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0
answers
327
views
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How to run R docker in WDL?
wdl R cromwell docker gatk written 7 months ago by c.clarido • 50
1
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671
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Job: Computer scientist or bioinformatician with strong computational background
web next-gen database docker job written 9 months ago by Arnaud Ceol • 840 • updated 7 months ago by wallssus • 0
0
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0
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303
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Job: Cloud engineer to support interdisciplinary cancer biology research
cloud computing systems administration docker job written 8 months ago by mwendl • 0
4
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445
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Page: Bioinformatics Docker Images Project (https://pegi3s.github.io/dockerfiles/)
page bioinformatics docker containers written 8 months ago by pegi3sdocker • 20
2
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0
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467
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How to install CRISPRdisco
docker written 11 months ago by saadleeshehreen • 70 • updated 11 months ago by Michael Dondrup ♦ 46k
1
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1
answer
392
views
1
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How to run SPAdes inside docker?
container cwl docker written 11 months ago by jeetsahu • 10 • updated 11 months ago by Michael R. Crusoe • 1.8k
0
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0
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295
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furious-luke/lizards-are-awesome package for ubuntu
gwas python docker linux written 13 months ago by bulbul • 10
0
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362
views
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Jitterbug, mobile element tool, docker container
jitterbug docker mobile elements written 17 months ago by filippo.martignano • 10
1
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1.0k
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1
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samtools and docker
software docker written 18 months ago by genya35 • 20 • updated 18 months ago by Eric Lim • 1.6k
4
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557
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Workflow for Releasing HPC Pipeline via Docker
deployment ngs pipeline docker hpc written 19 months ago by aostern • 30
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1
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1.0k
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1
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CWL: build docker image with DockerRequirements: dockerFile?
cwl docker written 22 months ago by ninsch3000 • 10 • updated 19 months ago by sshinya • 10
3
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1
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I'm putting a pipeline into docker, where do I store the tar files for my dependencies, on GitHub or within the Docker image?
pipeline docker written 22 months ago by SaltedPork • 100 • updated 22 months ago by Eric Lim • 1.6k
2
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6 follow
2
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rna seq docker
docker written 2.5 years ago by novicebioinforesearcher • 50 • updated 2.2 years ago by ypriverol • 0
1
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1.1k
views
0
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Job: Bioinformatician, NCI Genomic Data Commons at the University of Chicago, Chicago, IL, USA
python cwl job docker written 2.3 years ago by Danielle • 310 • updated 2.3 years ago by genomax ♦ 74k
1
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Docker error "Mounts denied" running example workflows from CWL User Guide on Mac OS X
mac os x common workflow language cwl docker macos written 2.4 years ago by Kevin Ernst • 0
2
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Tutorial: Help demonstrate reproducibility in bioinformatics with the GA4GH's tool execution Challenge
cwl tutorial ga4gh rabix docker written 2.7 years ago by adrian.sharma • 20
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Job: Bioinformatics Specialist Position - Mexico
bioinformatician docker job bash written 2.8 years ago by bridget.a.mcmahon • 20
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Job: Bioinformatics Specialist Position - London, UK
bioinformatics bash docker job linux written 2.9 years ago by bridget.a.mcmahon • 20
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I want to store a docker image reproducing a paper. Is there a host for docker images of studies?
reproducible docker written 3.3 years ago by endrebak • 800 • updated 3.3 years ago by Giovanni M Dall'Olio ♦ 26k
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Job: Bioinformatics Specialist Position - Oxford
oxford python docker job bash written 3.9 years ago by bridget.a.mcmahon • 20
49
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6.3k
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46 follow
2
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Tool: list of dockerized bioinformatics apps
forum docker tool written 5.0 years ago by 14134125465346445 • 3.5k • updated 4.5 years ago by Andreas • 2.4k
25
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5
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7 follow
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Docker - one image to rule them all?
docker written 4.6 years ago by Manuel • 370 • updated 4.6 years ago by Jeremy Leipzig ♦ 18k
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