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Job: Head of Biomedical Data and Applications Centre of Excellence
python job docker written 5 days ago by JC ♦ 11k
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141
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Singularity Version of Optitype
hla docker written 6 weeks ago by Sophist • 0
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1
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148
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1
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How to create custom docker image to download bam files from SRA
docker written 7 weeks ago by MAPK • 1.6k
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141
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Exporting PATH in Dockerfile
python conda docker written 7 weeks ago by Barry Digby • 500
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188
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Rule in snakemake using singularity: unterminated quoted string
singularity snakemake cellranger docker written 12 weeks ago by compuTE • 50
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205
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Editing tools script in a docker container
dockerhub singularity docker written 7 months ago by Barry Digby • 500
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51 follow
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Tool: list of dockerized bioinformatics apps
forum docker tool written 6.0 years ago by 14134125465346445 • 3.5k • updated 7 months ago by kapsakcj • 60
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542
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3
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Pindel installation failing due to htslib
htslib docker pindel written 10 months ago by cdastmalchi • 0 • updated 8 months ago by steve • 2.6k
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198
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1
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How to perform iteration task inside a docker image (RNA-seq analysis)
quantification docker rna-seq written 8 months ago by dodausp • 140 • updated 8 months ago by Barry Digby • 500
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Can't install DESeq2 via Docker container because of dependency issues
gene R deseq2 docker rna-seq written 9 months ago by cdastmalchi • 0 • updated 9 months ago by sviatoslav.kendall • 770
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341
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Forum: Kubernetes in Production?
forum webservice kubernetes ci/cd docker written 10 months ago by acamukhin • 0
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7 follow
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salmon was only able to assign 0 fragments to transcripts
windows10 salmon docker rna-seq written 12 months ago by naseerkhan861 • 10 • updated 12 months ago by yztxwd • 380
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269
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Tool: Compi: Application Framework for Portable Computational Pipelines
workflow management system pipeline docker tool written 12 months ago by Hugo • 290
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707
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1
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How to run Picard docker image
alignment next-gen picard docker written 13 months ago by elcortegano • 50
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Job: Research Associate in Genomics Pipelines @ UEA, Norwich, UK
docker cancer job ngs bioinformatics pipelines written 15 months ago by dan.brewer • 90
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789
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1
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CWL docker command user
cwl-runner cwl docker written 16 months ago by dganiewich • 120 • updated 16 months ago by Tom • 530
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504
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How does bbduk calculate it's memory requirements?
bbduk docker memory written 17 months ago by Lina F • 190
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1
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422
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1
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How to mount my data into docker container through -v command?
container docker rna-seq bash scripting written 17 months ago by F. Golestan • 60
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643
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How to run R docker in WDL?
wdl R cromwell docker gatk written 18 months ago by c.clarido • 60
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Job: Computer scientist or bioinformatician with strong computational background
web next-gen database docker job written 20 months ago by Arnaud Ceol • 850 • updated 18 months ago by wallssus • 0
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508
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Job: Cloud engineer to support interdisciplinary cancer biology research
cloud computing systems administration docker job written 19 months ago by mwendl • 0
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Page: Bioinformatics Docker Images Project (https://pegi3s.github.io/dockerfiles/)
page bioinformatics docker containers written 20 months ago by pegi3sdocker • 20
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777
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How to install CRISPRdisco
docker written 23 months ago by saadleeshehreen • 70 • updated 23 months ago by Michael Dondrup ♦ 47k
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590
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How to run SPAdes inside docker?
container cwl docker written 23 months ago by jeetsahu • 10 • updated 23 months ago by Michael R. Crusoe • 1.8k
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453
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furious-luke/lizards-are-awesome package for ubuntu
gwas python docker linux written 2.1 years ago by bulbul • 10
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475
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Jitterbug, mobile element tool, docker container
jitterbug docker mobile elements written 2.4 years ago by filippo.martignano • 20
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1.5k
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samtools and docker
software docker written 2.4 years ago by genya35 • 30 • updated 2.4 years ago by Eric Lim • 1.7k
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780
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Workflow for Releasing HPC Pipeline via Docker
deployment ngs pipeline docker hpc written 2.5 years ago by aostern • 30
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1.5k
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1
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CWL: build docker image with DockerRequirements: dockerFile?
cwl docker written 2.7 years ago by ninsch3000 • 10 • updated 2.6 years ago by sshinya • 10
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I'm putting a pipeline into docker, where do I store the tar files for my dependencies, on GitHub or within the Docker image?
pipeline docker written 2.8 years ago by SaltedPork • 110 • updated 2.8 years ago by Eric Lim • 1.7k
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