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<prev • 926 results • page 1 of 31 • next >
165
votes
19
answers
45k
views
65 follow
19
answers
How To Remove The Same Sequences In The Fasta Files?
fasta duplicates sequence written 7.9 years ago by Zhangleisdau • 270 • updated 3 hours ago by ferroao • 0
5
votes
1
answer
898
views
1
answer
How to rename chromosome names in GTF file?
gtf fasta annotation genome written 12 months ago by cristian • 120 • updated 17 hours ago by Biostar ♦♦ 20
1
vote
1
answer
76
views
5 follow
1
answer
Orthomcl clusters to fasta
ortho mcl alignment cluster fasta written 23 hours ago by wocana • 0 • updated 21 hours ago by lieven.sterck • 2.3k
2
votes
1
answer
94
views
1
answer
Count the number of sequences in fasta file using perl
perl bioinformatics bioperl fasta written 3 days ago by koushikayaluri • 10 • updated 3 days ago by ivan.antonov • 50
105
votes
15
answers
7.6k
views
22 follow
15
answers
Code Golf: Digesting Fasta Sequences Into A Set Of Smaller Sequences
fasta sequence code written 8.2 years ago by Eric Normandeau ♦ 9.9k • updated 6 days ago by Ram ♦ 17k
2
votes
2
answers
1.7k
views
2
answers
Can You Improve This Erlang Code ? (Was "Average Length Of The Sequences In A Fasta File")
fasta sequence functional code written 8.2 years ago by Pierre Lindenbaum ♦ 112k • updated 6 days ago by Ram ♦ 17k
280
votes
26
answers
11k
views
29 follow
26
answers
Code Golf: Mean Length Of Fasta Sequences
fasta sequence code written 8.2 years ago by Eric Normandeau ♦ 9.9k • updated 6 days ago by Ram ♦ 17k
1
vote
0
answers
562
views
0
answers
How to download tsa sequences from BioProject ID and saving it in fasta format?
fasta nucleotide tsa written 17 months ago by AsoInfo • 220 • updated 9 days ago by Biostar ♦♦ 20
8
votes
1
answer
98
views
1
answer
How to (and where) download Zebrafish Reference Genome (other than Ensembl or USCS)?
genome fasta zebrafish reference daniorerio written 10 days ago by realnewbie • 10 • updated 10 days ago by WouterDeCoster ♦ 32k
4
votes
2
answers
358
views
6 follow
2
answers
How to convert fasta file format to phylip file format
fasta R phylogenetic tree phylip ggtree written 4 weeks ago by Mike • 1.0k • updated 11 days ago by Guangchuang Yu • 1.9k
40
votes
4
answers
27k
views
11 follow
4
answers
How To Parse Fasta Files In Perl
fasta perl written 8.3 years ago by nikulina • 280 • updated 11 days ago by Ram ♦ 17k
6
votes
2
answers
2.5k
views
6 follow
2
answers
Problems Importing Sequences Using Seqinr In R
fasta R sequence written 8.3 years ago by Emma • 20 • updated 11 days ago by Ram ♦ 17k
2
votes
1
answer
1.3k
views
1
answer
Assembly With Phrap With Some Missing Quality Files.
fasta assembly quality written 8.3 years ago by Joseph Hughes • 2.6k • updated 11 days ago by Ram ♦ 17k
0
votes
1
answer
150
views
5 follow
1
answer
Parsing header of FASTA File
fasta sequence header parse written 12 days ago by Shelle • 0 • updated 12 days ago by ATpoint ♦ 7.5k
3
votes
1
answer
143
views
1
answer
command-line tool to split genome FASTA into equal chunks?
software fasta conversion written 13 days ago by gtrwst9 • 0 • updated 12 days ago by genomax ♦ 55k
19
votes
4
answers
2.7k
views
8 follow
4
answers
Simple Fasta Parsing Is Not Simple.
fasta python biopython file written 8.4 years ago by Vlinxify • 90 • updated 13 days ago by Ram ♦ 17k
2
votes
1
answer
127
views
1
answer
How to download Refseq of bacteria as a COMPLETE genome format
genome fasta refseq sequencing written 14 days ago by Shelle • 0 • updated 13 days ago by genomax ♦ 55k
95
votes
7
answers
70k
views
26 follow
7
answers
Correct Way To Parse A Fasta File In Python
fasta python parsing written 8.4 years ago by Eric Normandeau ♦ 9.9k • updated 14 days ago by Ram ♦ 17k
6
votes
2
answers
3.9k
views
2
answers
Iterating Through Fasta Sequences With Pyfasta Python Module
fasta python written 8.4 years ago by Eric Normandeau ♦ 9.9k • updated 14 days ago by Ram ♦ 17k
9
votes
1
answer
236
views
5 follow
1
answer
Editing fasta headers with bash
fasta script fasta headers bash written 17 days ago by James • 10 • updated 16 days ago by jrj.healey ♦ 6.8k
13
votes
4
answers
180
views
7 follow
4
answers
Splitting a fasta file based on the number of headers.
fasta python bash written 18 days ago by sicat.paolo20 • 20 • updated 17 days ago by Alex Reynolds ♦ 25k
3
votes
1
answer
265
views
1
answer
How to extract Refseq of downloaded files from NCBI
fasta assembly sequence written 19 days ago by Shelle • 0 • updated 19 days ago by jrj.healey ♦ 6.8k
3
votes
0
answers
189
views
0
answers
how to add the sample name to the end read headers
fasta header relablel written 20 days ago by juan.galarza • 0 • updated 20 days ago by genomax ♦ 55k
3
votes
1
answer
201
views
6 follow
1
answer
Fastest way to process fasta file?
fasta sequence written 21 days ago by gewa • 0 • updated 21 days ago by sacha • 1.5k
0
votes
1
answer
129
views
1
answer
Converting fasta to gtf using reference genome
fasta gtf conversion written 24 days ago by KI • 0 • updated 24 days ago by h.mon ♦ 19k
2
votes
1
answer
242
views
1
answer
download refseq of thousand of assembly file from NCBI
wget fasta refseq bash written 24 days ago by Shelle • 0
3
votes
2
answers
205
views
2
answers
Merge fasta files
fasta python biopython written 29 days ago by js8226 • 0 • updated 25 days ago by finswimmer ♦ 5.3k
1
vote
1
answer
168
views
1
answer
How to generate Protein Table file ( .ptt ) and RNA table file ( .rnt ) from a nucleotide fasta file?
fasta assembly ngs ptt rnt written 4 weeks ago by Optimist • 40
9
votes
0
answers
220
views
7 follow
0
answers
covert SAM to full length fasta
fasta sam file conversion written 5 weeks ago by marongiu.luigi • 300
1
vote
1
answer
760
views
1
answer
MAF to Fasta or XMFA - how does it work?
maf fasta xmfa mugsy written 16 months ago by jrj.healey ♦ 6.8k • updated 5 weeks ago by steven.davis • 10
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