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4
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1
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194
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7 follow
1
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Retrieve many FASTA of the same gene from NCBI..
gene fasta sequence written 2 days ago by uwardgma • 0 • updated 3 hours ago by genomax ♦ 63k
0
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0
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57
views
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list to one fasta file
fasta R biomar written 7 days ago by c.chakraborty • 110
2
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0
answers
162
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5 follow
0
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multiple FASTA sequnces in to one full sequnce according to their chromosome number
fasta .bam ngs written 14 days ago by Anu • 0 • updated 10 days ago by pltbiotech_tkarthi • 100
5
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2
answers
89
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2
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How to rename duplicate fasta headers after the first underscore '_'?
fasta duplicate header sed awk written 10 days ago by MB • 20 • updated 10 days ago by Carambakaracho • 930
9
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0
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110
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7 follow
0
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Tutorial: Generating consensus sequence from bam file
fasta consensus tutorial bam written 11 days ago by finswimmer ♦ 11k • updated 11 days ago by WouterDeCoster ♦ 37k
2
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2
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84
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How to add header name to all annotation lines
fasta sequencing written 11 days ago by bioteksampath • 0 • updated 11 days ago by JC ♦ 7.6k
7
votes
2
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107
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6 follow
2
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Simple FASTQ/A manipulation... how to add a single adapter sequence to 5' of all reads?
fasta fastq written 12 days ago by quickquark • 0
2
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1
answer
137
views
1
answer
Generating consensus sequence from bam file
genome fasta samtools bwa written 12 days ago by chparada • 0
0
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0
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106
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0
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Replace FASTA header and create tab-delimited file
perl fasta written 12 days ago by Mimmi Ahlmén • 10
1
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0
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109
views
0
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GTF from consensus sequence
gtf fasta gff written 13 days ago by lfiedlerc • 10
1
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0
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223
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How to submit a Pilon fasta output to the RAST annotation service using Shell or Python code?Are there any clear code examples on how to submit the input and to retrieve the RAST annotations?
fasta python shell rast written 8 weeks ago by bioinf_ukraine • 0
7
votes
1
answer
126
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5 follow
1
answer
Separate lines based on some character?
fasta R linux written 18 days ago by star • 130 • updated 17 days ago by zx8754 ♦ 6.7k
1
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0
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108
views
0
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Extract several parts from fasta header
fasta grep sed unix bash written 19 days ago by rah • 20
1
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0
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104
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0
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Error with makeblastdb from UniProt fasta file: no sequences were found
makeblastdb fasta uniprot blast error written 19 days ago by mafernandez • 0
6
votes
1
answer
153
views
1
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How to extract organisms name from the headers in a multi-fasta file?
fasta header sed regex written 20 days ago by MB • 20 • updated 20 days ago by finswimmer ♦ 11k
1
vote
1
answer
110
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1
answer
Multigene-Phylogeny: How to merge several Multiple-Sequence-Alignments?
fasta alignment raxml msa mafft written 25 days ago by Tom.Ma • 0 • updated 22 days ago by Brice Sarver • 2.5k
0
votes
1
answer
376
views
1
answer
Obiconvert produces empty EcoPCR database...why?
fasta obiconvert ecopcr obitools written 8 months ago by mingala • 0 • updated 26 days ago by patrick_freeman • 0
0
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2
answers
150
views
2
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Convert Fasta format to MEME-motif format
meme-suite fimo format conversion motif fasta written 29 days ago by kashifalikhan007 • 50
10
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2
answers
232
views
2
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How to get proteins from GFF file resulted from MAKER annotation
genome assembly maker gff3 fasta written 4 weeks ago by imda • 0 • updated 4 weeks ago by jean.elbers • 720
8
votes
2
answers
265
views
7 follow
2
answers
Linearize fasta files
fasta code golf written 4 weeks ago by finswimmer ♦ 11k • updated 4 weeks ago by genomax ♦ 63k
1
vote
1
answer
132
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1
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Any script or program to change aln file into fasta?
fasta aln format written 4 weeks ago by hektor102 • 0 • updated 4 weeks ago by Jean-Karim Heriche ♦ 18k
4
votes
2
answers
1.5k
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5 follow
2
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fastq to fasta conversion
fasta fastq go written 12 months ago by monicasteffi • 10 • updated 5 weeks ago by swbarnes2 ♦ 4.9k
0
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0
answers
127
views
0
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Population Genetics and Allele Richness
genome R population genetics fasta written 6 weeks ago by Myo Naung • 10 • updated 6 weeks ago by zx8754 ♦ 6.7k
2
votes
0
answers
167
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5 follow
0
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How to get a FASTA file where you filter by length to exclude sortest and longest 10%
fasta alignment sequence linux awk written 6 weeks ago by namarino • 0 • updated 6 weeks ago by RamRS ♦ 20k
1
vote
2
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130
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2
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Append number to the fasta sequence header with the times sequence has been repeated
perl python fasta written 6 weeks ago by Gene-ticks • 0 • updated 6 weeks ago by Pierre Lindenbaum ♦ 117k
0
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1
answer
125
views
1
answer
too many characters in strings containing long protein sequence ?
fasta protein biopython sequencing written 6 weeks ago by gaiboyan23 • 0 • updated 6 weeks ago by jrj.healey ♦ 11k
8
votes
0
answers
231
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7 follow
0
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What is the best way to merge multiple fasta files containing contigs?
anvi’o assembly fasta written 7 weeks ago by anastasia.gs17 • 0 • updated 6 weeks ago by zx8754 ♦ 6.7k
0
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0
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169
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Get positions from FASTA alignment in bed format
fasta bed alignment bam written 7 weeks ago by kalahari • 0
4
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2
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245
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5 follow
2
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Remove/Delete unique reads from a DNA fasta file
fasta unique reads remove dna written 7 weeks ago by saanasum • 10 • updated 7 weeks ago by genomax ♦ 63k
0
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0
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125
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0
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Parsing RepeatMasker Output Files
fasta repeatmasker written 8 weeks ago by gtasource • 20
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