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<prev • 1,066 results • page 1 of 36 • next >
2
votes
1
answer
63
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1
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Retrieve multiple FASTA from UniProt using R
fasta R uniprot written 1 day ago by akansha.gitanjali • 0 • updated 9 hours ago by h.mon ♦ 28k
9
votes
2
answers
156
views
2
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Extract sequences consecutively from a large fasta files and save in new fasta files
perl python R shell fasta written 9 days ago by Dineshkumar K • 30 • updated 7 days ago by Chirag Parsania • 1.7k
1
vote
1
answer
55
views
1
answer
How to download Grch38p7 database associated DBSNP151
vcf fasta hg38 snp dbsnp written 9 days ago by clear.choi • 30 • updated 9 days ago by Ahill • 1.6k
3
votes
1
answer
90
views
1
answer
Extract specific sequence from FASTA file
fasta written 13 days ago by YusukeSasaki • 0 • updated 13 days ago by h.mon ♦ 28k
2
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0
answers
72
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0
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Entries Per File FASTA Splitter, not quite working
gene fasta bioinformatics software error python written 20 days ago by damonlbp • 20
2
votes
1
answer
78
views
1
answer
bedtools not working properly
bedtools fasta alignment written 20 days ago by wstla27 • 0 • updated 20 days ago by Amar • 480
1
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0
answers
81
views
0
answers
Concatenate FASTA seqs accroding to species
fasta sequence concatenate bash written 20 days ago by c_gomez • 0
5
votes
4
answers
300
views
9 follow
4
answers
Python FASTA scripting
fasta python bioinformatics written 7 weeks ago by damonlbp • 20 • updated 20 days ago by Alex Reynolds ♦ 29k
0
votes
1
answer
191
views
1
answer
Bedtools problem : It looks as though you have less than 3 columns at line: 1. Are you sure your files are tab-delimited
bedtools bioinformatics fasta written 25 days ago by Tomm • 0 • updated 24 days ago by genomax ♦ 74k
25
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5
answers
19k
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14 follow
5
answers
How Do I Convert Fa Files To Bed Format?
fasta bed written 7.9 years ago by Keziah • 70 • updated 26 days ago by john.major • 0
1
vote
2
answers
245
views
2
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select longest isoform from RefSeq proteome fasta
fasta proteome refseq isoform written 4 months ago by wd • 0 • updated 28 days ago by vkkodali • 1.4k
4
votes
1
answer
143
views
6 follow
1
answer
Chunk That Fasta?
fasta python dna sequence chunk written 29 days ago by damonlbp • 20 • updated 29 days ago by massa.kassa.sc3na • 160
0
votes
2
answers
87
views
2
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Recover from protein ID the corresponding nucleotide ID .
fasta python ncbi written 29 days ago by Darill • 30 • updated 29 days ago by massa.kassa.sc3na • 160
0
votes
1
answer
178
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1
answer
How to count and compare k-mer count vectors (and print the top ten highest contributions)?
fasta kmers sequence rna-seq count vectors written 4 weeks ago by nihaldm169 • 0 • updated 29 days ago by Joe ♦ 15k
8
votes
2
answers
125
views
7 follow
2
answers
Removing the last part of fasta header in many alignmnet files
fasta loop sed bash written 4 weeks ago by Badh2 • 0 • updated 4 weeks ago by JC ♦ 9.1k
2
votes
1
answer
151
views
1
answer
How do you extract longest transcript from fasta file using length and header IDs?
fasta awk written 4 weeks ago by DNAngel • 40 • updated 4 weeks ago by JC ♦ 9.1k
3
votes
1
answer
130
views
1
answer
concat fasta sequences based on some common header string
fasta sequence dna written 4 weeks ago by mforthman • 30 • updated 4 weeks ago by Pierre Lindenbaum ♦ 124k
3
votes
1
answer
553
views
1
answer
command-line tool to split genome FASTA into equal chunks?
software fasta conversion written 14 months ago by gtrwst9 • 0 • updated 5 weeks ago by Biostar ♦♦ 20
3
votes
1
answer
113
views
1
answer
Remove and Substitute Fasta Header
fasta alignment written 5 weeks ago by nalexandre • 10
0
votes
0
answers
144
views
0
answers
Rename fasta headers using a variable already present in the header?
fasta written 5 weeks ago by FreshBio • 0
6
votes
1
answer
107
views
1
answer
Remove part of headers in FASTA file
fasta header counter unix written 6 weeks ago by peterlageweg603 • 10 • updated 6 weeks ago by Macspider • 3.0k
3
votes
1
answer
156
views
1
answer
How to compute the AT/GC ratio for an e.coli sequence in a fasta file?
fasta sequencing written 6 weeks ago by botinky • 0 • updated 6 weeks ago by Mensur Dlakic • 2.2k
7
votes
2
answers
246
views
5 follow
2
answers
How do I download mm10 major release genomic fasta and gtf file?
gtf assembly genomic fasta ftp written 7 weeks ago by sg197 • 10 • updated 7 weeks ago by 27atcggcta27 • 150
21
votes
0
answers
938
views
21 follow
0
answers
Tutorial: Generating consensus sequence from bam file
fasta consensus tutorial bam written 8 months ago by finswimmer ♦ 12k
0
votes
0
answers
829
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0
answers
Simple way to extract or mask specific sites only from multi-FASTA alignments
bedtools fasta snp seqtk written 2.2 years ago by Kame • 20 • updated 8 weeks ago by Biostar ♦♦ 20
81
votes
12
answers
56k
views
41 follow
12
answers
How To Extract A Sequence From A Big (6Gb) Multifasta File ?
fasta written 7.3 years ago by Mchimich • 260 • updated 8 weeks ago by romain.lannes • 80
2
votes
1
answer
178
views
1
answer
Re-mapping contigs or predicted genes?
genome alignment fastq sequence fasta written 9 weeks ago by Hansen_869 • 10 • updated 9 weeks ago by Joe ♦ 15k
0
votes
0
answers
152
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0
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Seqkit concat removing few species
gene fasta seqkit sequence concat written 3 months ago by lokdeep17 • 0 • updated 9 weeks ago by Biostar ♦♦ 20
4
votes
3
answers
3.2k
views
7 follow
3
answers
How to extract fasta sequences from assembled transcripts generated by Stringtie
fasta gtf file stringtie sequences written 2.5 years ago by seta • 1.2k • updated 10 weeks ago by Juke-34 • 2.9k
39
votes
5
answers
4.6k
views
10 follow
5
answers
Why Don'T We Use Binary Format?
fasta written 6.4 years ago by sutkss • 40 • updated 11 weeks ago by jflopezfernandez • 30
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