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<prev • 908 results • page 1 of 31 • next >
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Fishing nucleotide sequences from genome files given aligned protein FASTA files using biopython
gene assembly fasta written 11 hours ago by mirali1025 • 0 • updated 9 hours ago by genomax ♦ 52k
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1
answer
77
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1
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Obiconvert produces empty EcoPCR database...why?
fasta obiconvert ecopcr obitools written 2 days ago by mingala • 0
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1
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99
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6 follow
1
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Can we find SNP from fasta sequences ?
fasta snp written 1 day ago by greyman • 30
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1
answer
1.0k
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1
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determining length of fasta cds and protein sequences
software cds protein fasta written 3.4 years ago by vigneshprbh37 • 20 • updated 4 days ago by lieven.sterck • 1.9k
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47
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samtools mpileup `error uninitialized value $l in numeric lt` during BAM to FASTA conversion
fasta samtolls mpileup bam written 5 days ago by marongiu.luigi • 210
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99
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Find adapter sequences
fasta adapter sequencing fastq fastqc written 7 days ago by science_lizard • 0
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2
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2.8k
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2
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Why Is Blast Creating Duplicates In My Output Files?!
fasta written 4.5 years ago by JayB • 30 • updated 9 days ago by ryleehackley • 0
4
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2
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134
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2
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Split ordered fasta file by alphabetical group using awk
fasta one-liner awk written 12 days ago by Josh Herr ♦ 5.6k • updated 12 days ago by cpad0112 • 7.7k
4
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2
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385
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2
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How to extract all promoter regions in multi-fasta format from genome using GFF?
genome fasta gff promoter written 5 months ago by rimgubaev • 40
6
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1
answer
121
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1
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Remove hypothetical proteins
fasta grep script written 16 days ago by biodano.geo • 0 • updated 13 days ago by Ram ♦ 16k
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1
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102
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1
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CDS sequence from mRNA and protein sequence
fasta cds protein code mrna written 15 days ago by Macspider • 2.4k • updated 15 days ago by lieven.sterck • 1.9k
19
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5
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15k
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10 follow
5
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Efficiently Iterating Over Fastq Records From Python
fasta fastq next-gen biopython python sequencing written 6.6 years ago by User 9996 • 770 • updated 18 days ago by hurfdurf • 460
21
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5
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15k
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13 follow
5
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How Do I Convert Fa Files To Bed Format?
fasta bed written 6.6 years ago by Keziah • 70 • updated 20 days ago by noahaus • 10
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1
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252
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7 follow
1
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Python script to remove sequences from a fasta file
fasta python written 26 days ago by T_18 • 10
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1
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136
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1
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Can't find chr1 in a large fasta file using samtools/htsjdk
fasta assembly reference samtools written 27 days ago by ljw1001 • 0 • updated 27 days ago by Eric Lim • 770
5
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4
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947
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6 follow
4
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Calculate length of sequences from fasta file
fasta written 7 months ago by KVC_bioinfo • 310 • updated 4 weeks ago by Kevin Blighe ♦ 24k
4
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2
answers
129
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2
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Remove extra sequences without unique names from fasta
fasta duplicates sequence uniq bash written 4 weeks ago by nmkn • 0 • updated 4 weeks ago by Pierre Lindenbaum ♦ 110k
49
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6
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39k
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19 follow
6
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How To Split One Big Sequence File Into Multiple Files With Less Than 1000 Sequences In A Single File
fasta next-gen sequencing perl R rna written 6.8 years ago by Hamilton • 260 • updated 4 weeks ago by har-wradim • 20
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222
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5 follow
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grep/awk issue: can't extract sequences from a fasta file
fasta extraction sequence grep shell written 5 weeks ago by benoit.kunath • 10
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1
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809
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5 follow
1
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Variant Effect Predictor parameters for custom gff and fasta
fasta gff vep snp written 18 months ago by R.Blues • 80 • updated 5 weeks ago by nicolas.dussex • 30
3
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1
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120
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1
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GFF3 to fasta (error)
gff3 fasta extract file written 5 weeks ago by wocana • 0
20
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3
answers
10k
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8 follow
3
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Fasta File To Sam Conversion
fasta format sam conversion written 7.2 years ago by Rallapalli Sukeerthi Teja • 10 • updated 5 weeks ago by harishchander.a • 0
1
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0
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167
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0
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get size information from an OTU table into a fastafile for use in USEARCH/VSEARCH
fasta header otu table written 12 weeks ago by EBP91 • 0
5
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4
answers
176
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8 follow
4
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Extract fasta sequences from a file using a list in another file.
fasta grep header extract awk written 6 weeks ago by EBP91 • 0 • updated 6 weeks ago by cpad0112 • 7.7k
2
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1
answer
310
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1
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How to convert bam into fasta with chromosome name in fasta file having consensus sequences in fasta file
fasta bam written 4 months ago by Kritika • 250 • updated 6 weeks ago by Biostar ♦♦ 20
3
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1
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202
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1
answer
Plot sequences using matplotlib
fasta sequencing matplotlib plot written 6 weeks ago by N Mukherjee • 0
0
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3
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391
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3
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Changing names of Fasta headers
fasta sequence sed unix bash loop written 4 months ago by tpaisie • 70 • updated 7 weeks ago by h.mon ♦ 16k
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94
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How to download FASTA file from psRNAtarget
fasta sequence script download batch written 7 weeks ago by ebrahimi.re67 • 0
4
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1
answer
167
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1
answer
Difference in chromosome numbering
bedtools R next-gen fasta written 7 weeks ago by banerjeeshayantan • 50 • updated 7 weeks ago by zx8754 ♦ 4.7k
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138
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Error when running PfamScan: Fasta file contains two sequences with same ID
genome proteome sequence pfamscan fasta written 7 weeks ago by philmster90 • 0
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