Showing: fastareset
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4
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0
answers
389
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5 follow
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grep/awk issue: can't extract sequences from a fasta file
fasta extraction sequence grep shell written 5 months ago by benoit.kunath10 • updated 1 day ago by Biostar ♦♦ 20
57
votes
12
answers
8.4k
views
17 follow
12
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Choosing Random Set Of Seqs From Larger Set
fasta random written 6.7 years ago by razor160 • updated 2 days ago by mdtoney0
24
votes
7
answers
8.3k
views
10 follow
7
answers
Remove duplicates in fasta file based on ID
fasta sed sort written 3.5 years ago by oliver.bayfield110 • updated 4 days ago by michau10
167
votes
21
answers
46k
views
70 follow
21
answers
How To Remove The Same Sequences In The Fasta Files?
fasta duplicates sequence written 8.1 years ago by Zhangleisdau270 • updated 4 days ago by michau10
13
votes
3
answers
234
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7 follow
3
answers
Tool to fix reference allele nucleotide in vcf
vcf fasta pony written 14 days ago by WouterDeCoster34k • updated 4 days ago by finswimmer6.9k
1
vote
1
answer
5.7k
views
1
answer
Psiblast Fasta Formatted Output
fasta blast+ written 5.0 years ago by Reyhaneh480 • updated 13 days ago by Biostar ♦♦ 20
0
votes
1
answer
133
views
1
answer
How download a sequence fasta from PDB using biopython / python?
fasta written 13 days ago by thayana.vt0 • updated 13 days ago by Pierre Lindenbaum114k
6
votes
2
answers
94
views
2
answers
How do concatenate different fasta file
fasta concatenate written 14 days ago by lkianmehr30 • updated 14 days ago by Nicolas Rosewick6.9k
3
votes
1
answer
279
views
1
answer
how to add the sample name to the end read headers
fasta header relablel written 11 weeks ago by juan.galarza0 • updated 14 days ago by Biostar ♦♦ 20
3
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1
answer
143
views
1
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Separate fasta file for each locus
fasta radseq awk written 15 days ago by NM0
0
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90
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0
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3
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1
answer
126
views
1
answer
3
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4
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2.3k
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4
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Extract sequence from fasta using primer
fasta extract primer pcr written 2.1 years ago by sacha1.6k • updated 21 days ago by m.schmitt0
2
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0
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108
views
0
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5
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4
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169
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5 follow
4
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0
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1
answer
162
views
7 follow
1
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5
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2
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145
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7 follow
2
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Faster way to get sequences from large fasta files?
fasta grep paired-ends written 4 weeks ago by emilywynn60 • updated 4 weeks ago by mike-zx110
6
votes
2
answers
137
views
2
answers
Extract sequence ID from Fasta for a given sequence
fasta written 4 weeks ago by MAPK1.3k • updated 4 weeks ago by michael.ante2.7k
47
votes
6
answers
21k
views
12 follow
6
answers
Sequence length from Fasta
fasta written 4.0 years ago by bongbang70 • updated 4 weeks ago by mg20
1
vote
1
answer
97
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1
answer
Fasta length does not match Ensembl info
fasta annotation written 5 weeks ago by rmf440 • updated 5 weeks ago by Nicolas Rosewick6.9k
1
vote
1
answer
123
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1
answer
Trouble installing and creating database for blast
fasta ubuntu blast written 5 weeks ago by asidhu0 • updated 5 weeks ago by Vijay Lakhujani3.2k
17
votes
1
answer
2.6k
views
1
answer
Tool: SeqKit: a cross-platform and ultrafast toolkit for FASTA/Q file manipulation in Golang
fasta fastq seqkit tool written 2.1 years ago by shenwei3564.2k • updated 5 weeks ago by bio_d0
282
votes
27
answers
11k
views
30 follow
27
answers
Mean Length Of Fasta Sequences
fasta codegolf sequence code written 8.3 years ago by Eric Normandeau10.0k • updated 6 weeks ago by Jeremy Leipzig18k
105
votes
15
answers
7.8k
views
22 follow
15
answers
Digesting Fasta Sequences Into A Set Of Smaller Sequences
fasta codegolf sequence code written 8.3 years ago by Eric Normandeau10.0k • updated 6 weeks ago by zx87545.7k
2
votes
2
answers
199
views
6 follow
2
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Extract a subset of fasta file based on header in python
fasta python written 6 weeks ago by xupbuy0 • updated 6 weeks ago by Siya Diya0
3
votes
1
answer
139
views
1
answer
5
votes
1
answer
128
views
1
answer
should FASTA files be sorted before indexed with SAMtools?
fasta sort samtools index written 7 weeks ago by Timze W20 • updated 7 weeks ago by finswimmer6.9k
4
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2
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211
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5 follow
2
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Orthomcl clusters to fasta
ortho mcl alignment cluster fasta written 8 weeks ago by wocana10 • updated 8 weeks ago by RamRS19k
5
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1
answer
1.1k
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1
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How to rename chromosome names in GTF file?
gtf fasta annotation genome written 14 months ago by cristian180 • updated 8 weeks ago by Biostar ♦♦ 20
2
votes
1
answer
171
views
1
answer
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