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<prev • 1,238 results • page 1 of 42 • next >
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109
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How to count frequency of kmers for different values of k from fasta file
fasta kmers frequency count genome written 5 days ago by Ashi • 10 • updated 5 days ago by GenoMax ♦ 95k
0
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0
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171
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0
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Mutual Information for a collection of FASTA files
fasta python bash sequence mutualinformation written 12 weeks ago by nameuser • 30
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2
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3.2k
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2
answers
Error using BLAST+
fasta protein uniprot blast written 5.1 years ago by onspotproductions • 140 • updated 6 days ago by Yanpeng Chen • 0
4
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1
answer
90
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1
answer
Adding gene names to fasta file
fasta motif-search written 8 days ago by mm2568 • 0 • updated 7 days ago by Joe ♦ 18k
2
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1
answer
102
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1
answer
trimming of fasta file
fasta trimming written 10 days ago by harry • 10 • updated 10 days ago by Pierre Lindenbaum ♦ 133k
0
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0
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286
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0
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Choosing random set of 500 fasta files from a folder containing large amount of fasta files in python or jupyter notebook
fasta files list sequences random written 14 days ago by Fadhalsh441 • 0
2
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0
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138
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0
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Extracting amino acid positions from a fasta sequence
fasta python written 15 days ago by akang • 90 • updated 15 days ago by rpolicastro ♦ 3.3k
1
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0
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91
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0
answers
How to create a merged human host viral RefSeq?
fasta fastq viral genome refseq rna-seq written 16 days ago by MatStat • 130
15
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4
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232
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7 follow
4
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How to extract a sequence below a fasta header (">") from a fasta file ?
fasta bash written 17 days ago by v.berriosfarias • 10 • updated 16 days ago by ATpoint ♦ 44k
1
vote
1
answer
138
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1
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Script for making exon file
fasta exon written 17 days ago by harry • 10 • updated 17 days ago by Pierre Lindenbaum ♦ 133k
1
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0
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72
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0
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Contigs in Embls
fasta embl written 18 days ago by estoakes91 • 10
0
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0
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78
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0
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how to incorporate abi 310 genetic analyzer output with next generation sequencing data
fasta capillary next-gen sequencing written 18 days ago by jennahamlin • 0
4
votes
4
answers
168
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6 follow
4
answers
How to parse a .fasta file in python ?
fasta python sequence written 22 days ago by 2001linana • 20 • updated 22 days ago by trausch • 1.6k
1
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2
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115
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2
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how to filter sequence database with bash?
fasta database sequencing grep bash written 22 days ago by Lisa Prudnikow • 0 • updated 22 days ago by Jorge Amigo ♦ 12k
19
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5
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19k
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14 follow
5
answers
Extract fasta sequences from a file using a list in another file.
fasta grep header extract awk written 2.6 years ago by EBP91 • 10 • updated 25 days ago by Rashedul Islam • 390
7
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2
answers
146
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6 follow
2
answers
How to distinguish nucleic acid and amino acid representation in FASTA files?
fasta data formats file formats written 27 days ago by Johannes W. Dietrich • 0 • updated 27 days ago by ATpoint ♦ 44k
0
votes
1
answer
114
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1
answer
Searching a DNA sequence for eukaryotic genes
fasta ensembl dna human chromosome 13 written 4 weeks ago by mohammad.shoumik.saad.aarman • 0 • updated 4 weeks ago by GenoMax ♦ 95k
0
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0
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164
views
0
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Find the first ORF of multiple fasta sequences using biopython
fasta python translate written 5 weeks ago by NewtoBioinfo • 0
11
votes
5
answers
8.8k
views
6 follow
5
answers
Convert Fas/Qual Into Fastq?
fasta fastq quality conversion written 9.0 years ago by Ahdf-Lell-Kocks • 1.6k • updated 5 weeks ago by anicet.ebou • 160
2
votes
2
answers
798
views
2
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Reduce FASTA file name
fasta genome perl awk written 5.0 years ago by akhilvbioinfo • 160 • updated 5 weeks ago by Biostar ♦♦ 20
1
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0
answers
181
views
0
answers
Gene Prediction by using Python
fasta codon dna written 5 weeks ago by anasjamshed1994 • 60
0
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0
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220
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0
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get error in kmer counting in python 3
fasta python kmer dna written 6 weeks ago by anasjamshed1994 • 60 • updated 6 weeks ago by _r_am ♦ 32k
2
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1
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1.8k
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1
answer
about Grep the complete sequences containing a specific motif in a fasta file
fasta grep sequence linux written 3.3 years ago by taojincs • 50 • updated 6 weeks ago by Biostar ♦♦ 20
0
votes
1
answer
107
views
1
answer
Problem with htseq-count: counts of 0?
genome fasta htseq-count transcriptomics written 6 weeks ago by sbitterw • 0 • updated 6 weeks ago by lieven.sterck ♦ 9.5k
4
votes
2
answers
228
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2
answers
Manipulating a fasta file to only have specific characters
fasta sed written 7 weeks ago by A • 3.9k • updated 6 weeks ago by Carlo Yague ♦ 5.5k
1
vote
1
answer
131
views
1
answer
Extracting only reads mapped to specific genomic region
fasta bam mapping written 7 weeks ago by agata • 10 • updated 7 weeks ago by JC ♦ 12k
0
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0
answers
127
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0
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How to determine what allele a sample has from FASTQ data?
fasta alleles fastq rna-seq sequencing written 7 weeks ago by psyc_biostars • 0 • updated 7 weeks ago by _r_am ♦ 32k
0
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0
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97
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0
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Listing fasta MSAs with certain taxa/header counts
gene genome next-gen alignment fasta written 7 weeks ago by herber4 • 20
4
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4
answers
6.5k
views
10 follow
4
answers
Faster way to get GC content and Coverage from .fasta
genome fasta next-gen sequencing bash written 2.9 years ago by Shred • 230 • updated 8 weeks ago by mendozamejian • 0
0
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0
answers
135
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0
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Calculating mutual information from FASTA files in Python
fasta python pandas dataframe nucleotide written 8 weeks ago by nameuser • 30
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