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3
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1
answer
1.4k
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1
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Applications/Methods For Whole Genome Shotgun Assembly?
fasta assembly fastq written 6.6 years ago by isa29 • 10 • updated 1 day ago by Biostar ♦♦ 20
3
votes
1
answer
113
views
1
answer
FASTA FILE to TABLE R/python
fasta R written 5 days ago by fagambaro3 • 0 • updated 2 days ago by gayachit • 20
1
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0
answers
44
views
0
answers
Promals is not taking the accurate name of FASTA sequence
fasta promals written 2 days ago by shalinikaushik1293 • 0
2
votes
0
answers
73
views
0
answers
Data randomization for apply some statistics
fasta sequence proteins written 4 days ago by psschlogl • 30
2
votes
2
answers
1.1k
views
2
answers
Biojava FastaReaderHelper read only 2814 ProteinSequence
fasta biojava reader sequence written 4.3 years ago by Roberto Tellez Ibarra • 0 • updated 4 days ago by Biostar ♦♦ 20
1
vote
2
answers
127
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2
answers
Trimming of fasta file headers
fasta rna rna-seq transcriptome written 9 days ago by 2822462298 • 30 • updated 8 days ago by tshtatland • 60
6
votes
3
answers
89
views
5 follow
3
answers
How to download from ncbi not a whole FASTA file, but only a certain interval?
fasta R biopython genbank written 12 days ago by hazirliver • 10 • updated 11 days ago by genomax ♦ 78k
1
vote
1
answer
90
views
1
answer
Fasta file not matching VCF
fasta bcftools samtools written 12 days ago by c.o.guldvog • 0 • updated 12 days ago by JC ♦ 9.4k
2
votes
1
answer
88
views
1
answer
How to specify codon based multiple sequence alignment in clustalw command line?
fasta sequence alignment clustalw gene written 17 days ago by Dineshkumar K • 30 • updated 15 days ago by lieven.sterck ♦ 6.9k
7
votes
1
answer
121
views
5 follow
1
answer
How to concatenate clustalw aligned fasta sequence?
fasta alignment sequence clustalw written 15 days ago by Dineshkumar K • 30 • updated 15 days ago by shenwei356 ♦ 5.0k
5
votes
2
answers
92
views
2
answers
Script to download fasta seqeuences for FGF1 to FGF12
fasta human written 19 days ago by Shicheng Guo • 8.0k • updated 18 days ago by genomax ♦ 78k
0
votes
0
answers
82
views
0
answers
Problems with using Phobius
genome software error sequence fasta phobius written 20 days ago by logleg92029 • 0 • updated 20 days ago by h.mon ♦ 29k
1
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0
answers
81
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0
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Remove sequence by coordinates with Biopython
fasta biopython written 20 days ago by Darill • 40
7
votes
2
answers
366
views
6 follow
2
answers
How do concatenate different fasta file
fasta concatenate written 15 months ago by lkianmehr • 30 • updated 22 days ago by nadiawerksfoon • 0
2
votes
1
answer
117
views
1
answer
Append only sequence itself to list, no metadata
fasta python biopython written 9 weeks ago by sam.vanbergen8 • 0 • updated 23 days ago by Biostar ♦♦ 20
3
votes
2
answers
128
views
2
answers
Determine NCBI Nucleotide source of .fasta amino acid file
fasta ncbi nucleotide written 4 weeks ago by LRStar • 190 • updated 27 days ago by genomax ♦ 78k
5
votes
2
answers
2.2k
views
2
answers
FASTA file to Karyotype file
fasta karyotype circos written 3.6 years ago by The Last Word • 180 • updated 28 days ago by eennadi • 0
2
votes
1
answer
110
views
1
answer
how to find the conserved region in two or more genomes
genome fasta written 4 weeks ago by zhangdengwei • 50 • updated 4 weeks ago by onestop_data • 160
3
votes
6
answers
2.0k
views
9 follow
6
answers
Generating consensus sequence from bam file
genome fasta samtools bwa written 11 months ago by chparada • 0 • updated 4 weeks ago by vsingh • 0
2
votes
1
answer
191
views
1
answer
Problem succesfully running freebayes
vcf fasta freebayes written 5 weeks ago by ja4123 • 0
3
votes
1
answer
85
views
1
answer
File not suitable for fasta index generation.
fasta freebayes index written 5 weeks ago by ja4123 • 0 • updated 5 weeks ago by Pierre Lindenbaum ♦ 126k
4
votes
1
answer
156
views
1
answer
Unable to find FASTA index entry for '1'
fasta vcf bam freebayes written 9 weeks ago by ja4123 • 0
10
votes
4
answers
162
views
7 follow
4
answers
How to remove just sequence ID's from a fasta file with multiple sequences
fasta grep sequence awk written 5 weeks ago by subrahmanya • 0 • updated 5 weeks ago by Joe ♦ 16k
1
vote
1
answer
95
views
1
answer
python function to kmer with windown size
fasta python kmer biopython written 5 weeks ago by flogin • 150 • updated 5 weeks ago by genomax ♦ 78k
0
votes
1
answer
136
views
1
answer
How to combine and convert fastq PE files into fasta files as batch?
fasta fastq denovoassembly written 7 weeks ago by sunnykevin97 • 30 • updated 7 weeks ago by ashish • 300
3
votes
2
answers
2.5k
views
2
answers
Bioperl Retrieve Fasta Sequence With Colon In Header
perl fasta bioperl written 7.2 years ago by jason.r.gallant • 10 • updated 7 weeks ago by Biostar ♦♦ 20
2
votes
4
answers
236
views
5 follow
4
answers
Process to remove terminal Ns from fasta?
fasta written 9 weeks ago by stacy734 • 40
0
votes
0
answers
156
views
0
answers
How to get a FASTA file from BAM, SAM, or VCF files
fasta fastq repeatmodeler conversion sequencing written 9 weeks ago by as2779 • 0
0
votes
2
answers
127
views
2
answers
Find overlapping sequences between pairs of protein fasta files
fasta overlap protein written 9 weeks ago by suzuBell • 40 • updated 9 weeks ago by Mensur Dlakic • 3.3k
4
votes
1
answer
254
views
1
answer
Convert nucleotide fasta of contigs to protein sequence genbank
fasta nucleotide protein genbank prokka written 10 weeks ago by claping • 0
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