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126 results • Page
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Herald:
The Biostar Herald for Monday, April 03, 2023
herald
13 months ago by
Biostar
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Biostar
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The Biostar Herald for Wednesday, January 31, 2024
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3 months ago by
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The Biostar Herald for Monday, February 14, 2022
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2.3 years ago by
Biostar
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The Biostar Herald for Monday, January 31, 2022
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2.3 years ago by
Biostar
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540
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Herald:
The Biostar Herald for Tuesday, July 20, 2021
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2.8 years ago by
Biostar
2.8k
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536
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The Biostar Herald for Monday, July 11, 2022
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22 months ago by
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163
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The Biostar Herald for Monday, April 29, 2024
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20 days ago by
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The Biostar Herald for Monday, May 16, 2022
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23 months ago by
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Herald:
The Biostar Herald for Tuesday, June 15, 2021
herald
updated 2.9 years ago by
natay
20 • written 2.9 years ago by
Biostar
2.8k
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612
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Herald:
The Biostar Herald for Monday, January 23, 2023
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16 months ago by
Biostar
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651
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The Biostar Herald for Monday, June 06, 2022
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810
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The Biostar Herald for Wednesday, August 02, 2023
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9 months ago by
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623
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The Biostar Herald for Monday, October 10, 2022
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19 months ago by
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2.8k
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566
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The Biostar Herald for Monday, May 09, 2022
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2.0 years ago by
Biostar
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758
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Herald:
The Biostar Herald for Monday, April 10, 2023
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13 months ago by
Biostar
2.8k
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597
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The Biostar Herald for Monday, October 03, 2022
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19 months ago by
Biostar
2.8k
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632
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Herald:
The Biostar Herald for Friday, July 02, 2021
herald
updated 2.9 years ago by
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20 • written 2.9 years ago by
Biostar
2.8k
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591
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Herald:
The Biostar Herald for Tuesday, March 15, 2022
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2.2 years ago by
Biostar
2.8k
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199
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The Biostar Herald for Tuesday, April 09, 2024
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712
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The Biostar Herald for Monday, January 02, 2023
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16 months ago by
Biostar
2.8k
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552
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The Biostar Herald for Monday, November 21, 2022
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18 months ago by
Biostar
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668
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The Biostar Herald for Monday, November 15, 2021
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2.5 years ago by
Biostar
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613
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23 months ago by
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577
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The Biostar Herald for Monday, September 19, 2022
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20 months ago by
Biostar
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323
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The Biostar Herald for Monday, February 26, 2024
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11 weeks ago by
Biostar
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591
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The Biostar Herald for Monday, December 06, 2021
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2.5 years ago by
Biostar
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385
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The Biostar Herald for Monday, December 11, 2023
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5 months ago by
Biostar
2.8k
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573
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The Biostar Herald for Monday, January 10, 2022
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2.4 years ago by
Biostar
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600
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Herald:
The Biostar Herald for Tuesday, August 03, 2021
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2.8 years ago by
Biostar
2.8k
1
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614
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Herald:
The Biostar Herald for Monday, November 08, 2021
herald
2.5 years ago by
Biostar
2.8k
2
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1.1k
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The Biostar Herald for Thursday, June 15, 2023
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11 months ago by
Biostar
2.8k
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721
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Herald:
The Biostar Herald for Monday, April 17, 2023
herald
13 months ago by
Biostar
2.8k
3
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578
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Herald:
The Biostar Herald for Monday, November 07, 2022
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18 months ago by
Biostar
2.8k
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389
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The Biostar Herald for Monday, December 04, 2023
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5 months ago by
Biostar
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623
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The Biostar Herald for Monday, May 30, 2022
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24 months ago by
Biostar
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633
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Herald:
The Biostar Herald for Monday, October 17, 2022
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19 months ago by
Biostar
2.8k
2
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468
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Herald:
The Biostar Herald for Monday, October 30, 2023
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6 months ago by
Biostar
2.8k
2
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667
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Herald:
The Biostar Herald for Monday, May 23, 2022
herald
updated 24 months ago by
Rob
6.6k • written 24 months ago by
Biostar
2.8k
3
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646
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Herald:
The Biostar Herald for Friday, September 03, 2021
herald
2.7 years ago by
Biostar
2.8k
3
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419
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Herald:
The Biostar Herald for Monday, November 13, 2023
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6 months ago by
Biostar
2.8k
2
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658
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Herald:
The Biostar Herald for Monday, January 09, 2023
herald
16 months ago by
Biostar
2.8k
0
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664
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Herald:
The Biostar Herald for Friday, August 27, 2021
herald
2.7 years ago by
Biostar
2.8k
2
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675
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Herald:
The Biostar Herald for Tuesday, February 28, 2023
herald
14 months ago by
Biostar
2.8k
2
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712
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Herald:
The Biostar Herald for Monday, March 13, 2023
herald
14 months ago by
Biostar
2.8k
2
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574
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Herald:
The Biostar Herald for Monday, August 08, 2022
herald
21 months ago by
Biostar
2.8k
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551
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The Biostar Herald for Monday, April 11, 2022
herald
2.1 years ago by
Biostar
2.8k
126 results • Page
2 of 3
Recent Votes
Comment: Add stats to the plot
Post-doctoral Position in Alzheimer’s Disease Genetics, ‘Omics, and Biomarkers
The Biostar Handbook. A bioinformatics e-book for beginners.
Answer: How to add Ensembl id to cluster.markers in Seurat
How to add Ensembl id to cluster.markers in Seurat
Comment: Duplicated sequence samtools
Answer: Duplicated sequence samtools
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Pierre Lindenbaum
161k
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▴ 30
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★ 2.5k
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Recent Replies
Answer: Add stats to the plot
by
Ghada
• 0
I think this is what caused the error. we do not have group 1 and 2 in the statistical test results???? ![enter image description here][…
Answer: scRNA-seq data trained model can be used for predictions on bulk RNA-seq data?
by
Bibi
• 0
@atpoint thanks you for your timely response. Can someone else shed light if we can compare the trend of DEGs using the scRNA and Bulk RNA…
Comment: Add stats to the plot
by
GenoMax
142k
Please use `101010` to format `code` so it is represented in monospace font. I have done this for you now.
Answer: is there a tool to recover corrupted fastq files
by
Tommaso
• 0
You may also want to give a try to **FastqWiper** (https://github.com/mazzalab/fastqwiper)
Comment: Add stats to the plot
by
Ghada
• 0
Thanks. That helpful. I am getting this error data4_test <- data4.ts%>% ungroup() %>% t.test(data =.,value ~ Condition)%>% + …
Comment: scRNA-seq data trained model can be used for predictions on bulk RNA-seq data?
by
ATpoint
82k
I cannot comment here. You are asking why results between two experiments are different. I do not know without seeing the data.
Comment: scRNA-seq data trained model can be used for predictions on bulk RNA-seq data?
by
Bibi
• 0
Thank you so much for this insight. I just want to clarify another point here. I have used scRNA seq data from mice mammary epithelial cell…
Comment: Is it Possible to "Merge" data from Replicates within a VCF SNP File
by
Pierre Lindenbaum
161k
> Cannot read non-existent file: file:///local/home/User/VCF_Filtering/biostar.code your file doesn't exist, is at the wrong place etc.
Comment: Is it Possible to "Merge" data from Replicates within a VCF SNP File
by
ajbarrett98
• 0
Hi Pierre, I am attempting to run this code and am running into this error: (jvar) $ jvarkit vcffilterjdk -f biostar.code Dart_VCF2_Or…
Comment: scRNA-seq data trained model can be used for predictions on bulk RNA-seq data?
by
ATpoint
82k
I cannot give a precise answer, as ML is not my field, but generally, why don't you apply the method to pseudobulks of the exact single-cel…
Answer: geom_bar issue in ggplot2 with xlim()
by
ATpoint
82k
https://stackoverflow.com/questions/10365167/geom-bar-bars-not-displaying-when-specifying-ylim
Comment: What marks a De-Novo Genome assembly as FAILED?
by
Umer
▴ 50
Yes. We are sequencing 45 different samples with illumina. 12 of these are also going to be sequenced with Nanopore (for hybrid assembly). …
Comment: HGVS Nomenclature of Multiple Indels found in Cis
by
LauferVA
4.2k
how has this code progressed? is it publically available? would you want to work together?
Comment: Design for complex RNA-Seq experiment using Deseq2
by
Ezequiel
• 0
I completely agree with most points. The PCA shows that the biggest driver of difference is the patients themselves, with PRE and POST time…
Comment: Add stats to the plot
by
marco.barr
▴ 130
Hi, you can add statistical annotations using `ggpubr` function `stat_pvalue_manual `. You need to make sure you calculate the p-values fir…
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