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124 results • Page
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Herald:
The Biostar Herald for Monday, January 17, 2022
herald
2.3 years ago by
Biostar
2.7k
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0
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570
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Herald:
The Biostar Herald for Monday, January 10, 2022
herald
2.3 years ago by
Biostar
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Herald:
The Biostar Herald for Monday, January 03, 2022
herald
updated 2.3 years ago by
Jeremy Leipzig
22k • written 2.3 years ago by
Biostar
2.7k
2
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0
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589
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Herald:
The Biostar Herald for Monday, December 06, 2021
herald
2.4 years ago by
Biostar
2.7k
3
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827
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Herald:
The Biostar Herald for Tuesday, November 23, 2021
herald
2.4 years ago by
Biostar
2.7k
1
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662
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Herald:
The Biostar Herald for Monday, November 15, 2021
herald
2.5 years ago by
Biostar
2.7k
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607
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Herald:
The Biostar Herald for Monday, November 08, 2021
herald
2.5 years ago by
Biostar
2.7k
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636
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Herald:
The Biostar Herald for Monday, November 01, 2021
herald
2.5 years ago by
Biostar
2.7k
3
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697
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Herald:
The Biostar Herald for Tuesday, October 26, 2021
herald
updated 2.5 years ago by
Istvan Albert
100k • written 2.5 years ago by
Biostar
2.7k
2
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620
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Herald:
The Biostar Herald for Wednesday, October 13, 2021
herald
2.5 years ago by
Biostar
2.7k
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The Biostar Herald for Tuesday, October 05, 2021
herald
2.6 years ago by
Biostar
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The Biostar Herald for Tuesday, September 21, 2021
herald
2.6 years ago by
Biostar
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The Biostar Herald for Tuesday, September 14, 2021
herald
2.6 years ago by
Biostar
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The Biostar Herald for Friday, September 03, 2021
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2.7 years ago by
Biostar
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657
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The Biostar Herald for Friday, August 27, 2021
herald
2.7 years ago by
Biostar
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625
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Herald:
The Biostar Herald for Tuesday, August 17, 2021
herald
2.7 years ago by
Biostar
2.7k
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591
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Herald:
The Biostar Herald for Tuesday, August 03, 2021
herald
2.7 years ago by
Biostar
2.7k
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622
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Herald:
The Biostar Herald for Monday, July 26, 2021
herald
2.8 years ago by
Biostar
2.7k
2
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531
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Herald:
The Biostar Herald for Tuesday, July 20, 2021
herald
2.8 years ago by
Biostar
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563
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Herald:
The Biostar Herald for Monday, July 12, 2021
herald
2.8 years ago by
Biostar
2.7k
4
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629
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Herald:
The Biostar Herald for Friday, July 02, 2021
herald
updated 2.8 years ago by
natay
20 • written 2.8 years ago by
Biostar
2.7k
2
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0
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594
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Herald:
The Biostar Herald for Tuesday, June 15, 2021
herald
updated 2.9 years ago by
natay
20 • written 2.9 years ago by
Biostar
2.7k
5
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0
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696
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Herald:
The Biostar Herald for Tuesday, June 08, 2021
herald
updated 2.9 years ago by
Istvan Albert
100k • written 2.9 years ago by
Biostar
2.7k
7
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1
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1.0k
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Herald:
The Biostar Herald for Wednesday, June 02, 2021
herald
updated 2.9 years ago by
Istvan Albert
100k • written 2.9 years ago by
Biostar
2.7k
124 results • Page
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Recent Votes
Answer: High Malat-1 expression in single cell data
Answer: High Malat-1 expression in single cell data
The Biostar Herald for Monday, April 29, 2024
A: Bam And Indexed Bam Files
High Malat-1 expression in single cell data
Segmentation fault using gemma
Produce PCA bi-plot for 1000 Genomes Phase III - Version 2
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Recent Replies
Comment: High Malat-1 expression in single cell data
by
dsull
★ 5.9k
Malat1 is a lncRNA abundant in the nucleus. I guess if Malat1 is abundant and stable, makes sense it could be detect in high amounts in scR…
Comment: CWl and toil singularity image e.g busybox? Thank you
by
Fadi
• 0
Where can I ask this question? Apparently this the place where you can help for toil?
Comment: Limma Analysis Agilent Microarray Data (GPL1708)
by
hagl
▴ 10
Dear Gordon, excuse me for not being specific regarding your advice. What would be the best way if I wanted to add new annotations to the …
Comment: Programmatically retrieving positions of protein active site residues
by
GenoMax
141k
While you wait to get answers, consider asking ChatGPT for a solution. You may be pleasantly surprised with pointers/code you will get.
Comment: High Malat-1 expression in single cell data
by
Kazo
▴ 10
When I perform differential analysis, the genes that could be considered as markers in this malat1 high cluster tend to be nuclear genes. D…
Comment: How to update R on ubuntu
by
GenoMax
141k
You can check where the application was installed using: https://unix.stackexchange.com/questions/39590/apt-get-install-where-does-it-go T…
Comment: What does it mean single base resolution in sequencing?
by
dsull
★ 5.9k
"using RNA-seq for allele imbalanced gene expression" -> Not sure what you mean by that; thousands of studies (including some ongoing studi…
Comment: High Malat-1 expression in single cell data
by
Kazo
▴ 10
I have noticed in articles that people define low-quality clusters and remove them from the data, but they don't exactly explain what makes…
Answer: High Malat-1 expression in single cell data
by
dsull
★ 5.9k
I'm assuming you read https://kb.10xgenomics.com/hc/en-us/articles/360004729092-Why-do-I-see-high-levels-of-Malat1-in-my-gene-expression-da…
Comment: Limma Analysis Agilent Microarray Data (GPL1708)
by
Gordon Smyth
★ 7.0k
I actually advised you not to remove duplicate probes, especially as you seem to be use probe annotation that is very old and possibly out …
Comment: Segmentation fault using gemma
by
dimpleadiwal050896
• 0
Hello, were you able to rectify this. If yes, do tell. I am getting a similar error. Thank you
Comment: Can I merge Hi-C fastq files from different lanes?
by
GenoMax
141k
If the data is a technical sequencing replicate i.e. the same pool of samples has run on two lanes then you can indeed merge the two lanes …
Comment: What should I consider as FASTA for dataset?
by
GenoMax
141k
> Should I use the shortened FASTA from pdb or should I use the full FASTA for my dataset? What analysis are you trying to use the data fo…
Comment: Is it possible to bulk download files from GEO repository?
by
GenoMax
141k
Galaxy specific requests are best posted on their help forum: https://help.galaxyproject.org/
Answer: Two references 1. genome 2. plasmid for bowtie2
by
GenoMax
141k
You can simply `cat` all reference sequences together. Create an index file with `bowtie2` and then align as usual.
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