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homology • reset12
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written 7.9 years ago by
Anima Mundi • 2.4k
• updated
10 weeks ago by
Biostar ♦♦ 20
46
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6
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6.3k
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6
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written 8.5 years ago by
Mike Dewar • 1.5k
• updated
3 months ago by
RamRS ♦ 19k
8
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1
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424
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1
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written 3 months ago by
utsafar • 10
• updated
3 months ago by
Bharat Iyengar • 250
1
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1
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167
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1
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4
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1
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279
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written 6 months ago by
michael • 0
• updated
6 months ago by
Michael Dondrup ♦ 45k
1
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1
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225
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1
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0
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1
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462
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1
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written 14 months ago by
l.souza • 60
• updated
14 months ago by
jrj.healey ♦ 9.1k
2
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1
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578
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written 14 months ago by
skim • 20
• updated
14 months ago by
jrj.healey ♦ 9.1k
1
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575
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1
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written 15 months ago by
skim • 20
• updated
15 months ago by
jrj.healey ♦ 9.1k
6
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1
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642
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1
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1
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1
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486
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written 19 months ago by
ruhi.jamali • 0
• updated
19 months ago by
fishgolden • 280
24
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4
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4.0k
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4
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written 8.6 years ago by
Mike Dewar • 1.5k
• updated
22 months ago by
Biostar ♦♦ 20
2
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2
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566
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2
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written 22 months ago by
moranr • 250
• updated
22 months ago by
Michael Dondrup ♦ 45k
0
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0
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506
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0
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1
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0
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2.4k
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0
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2
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2
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1.9k
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2
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29
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3
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2.4k
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6 follow
3
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written 6.3 years ago by
Whetting • 1.5k
• updated
2.4 years ago by
natasha.sernova • 3.1k
2
votes
0
answers
1.4k
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0
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3
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1
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741
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1
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written 2.5 years ago by
ana16 • 0
• updated
2.5 years ago by
Jean-Karim Heriche ♦ 17k
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A: GATK DP filter for multiple samples by
Flávia Rogério • 0
I have exactly the same question about DP filter. Did you find some way to filter it?
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I think this is a point where access to your data/analysis may be needed to figure out what is go...
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C: How to export rld (rlog) or vsd values from DESeq2? by
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I tried, but happens that error: rld <- rlog(dds, blind=FALSE) write.csv(rld, file="r...
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Python has some XML (and JSON) libraries that can be imported, which you might find helpful: htt...
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ishmahe16 • 0
So i had 6 files 3 control and 3 primed files and had to find the most differentially expressed g...
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C: High no feature counts in ht-seq counts by
eozcan • 0
I tried another annotation file and a fasta file from Ensemle, the previous one from ncbi. In ord...
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C: How to export rld (rlog) or vsd values from DESeq2? by
WouterDeCoster ♦ 35k
And what about something like rld <- rlog(dds, blind=FALSE) write.csv(rld, file="rld....
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C: umi_tools extract error: IndexError: string index out of range by
genomax ♦ 59k
Please start a new thread if you have a new question.
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C: How to export rld (rlog) or vsd values from DESeq2? by
LuisNagano • 10
Thank you, WouterDeCoster, but i don't want to apply the functions "rlog" or "vst", I just did th...
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C: High no feature counts in ht-seq counts by
genomax ♦ 59k
Only thing I can think of is the annotation file you downloaded is either not in the correct form...
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C: High no feature counts in ht-seq counts by
eozcan • 0
I tried that it does not change/improve my reads.
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A: umi_tools extract error: IndexError: string index out of range by
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Hi again, If I followed UMI extraction first and then adapter trimming later, there is a weird l...
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