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is there a web-based tool to cross-species compare multiple nucleotide or protein sequences for identity and homology in batches
alignment homology written 4 months ago by CrazyB • 210 • updated 4 months ago by jared.andrews07 ♦ 5.3k
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1
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207
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1
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Best homology group in eggnog-mapper 2.0.1
eggnog homology annotation written 4 months ago by Asaf ♦ 7.3k
2
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1
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443
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1
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Understanding hhblits output
hhsuite homology hhblits hmm written 9 months ago by mnsp088 • 40 • updated 8 months ago by Biostar ♦♦ 20
1
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1
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180
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how to use blastpt between isoforms of the same genes?
homology blast written 8 months ago by star • 230 • updated 8 months ago by Mensur Dlakic • 4.3k
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230
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1
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Homology in EMBL Biomart
biomart homology written 8 months ago by The Last Word • 190 • updated 8 months ago by Ben_Ensembl • 1.3k
6
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2
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613
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2
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Erorr running HHblits
hmm homology protein written 10 months ago by max_19 • 130 • updated 8 months ago by sofimukhtar1 • 0
4
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2
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357
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6 follow
2
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Tool for visualisation of blast results
alignment homology rna-seq evolutionary genomics written 9 months ago by s.m.frampton • 10 • updated 9 months ago by Joe ♦ 16k
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2
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3.1k
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6 follow
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Homology Modelling And Energy Minimization
homology written 6.6 years ago by tithiroy33 • 0 • updated 10 months ago by manishagurnani10 • 0
2
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1
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163
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custom database in HH-suite
domain hh-suite orthogroup homology hmm written 10 months ago by yp19 • 50 • updated 10 months ago by Joe ♦ 16k
1
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336
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Forum: Homologous sequences problematic in RNA-seq
genome forum homology rna-seq written 12 months ago by chengye • 10 • updated 12 months ago by h.mon ♦ 29k
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365
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Finding a suitable Independent Variable for a Protein sequence homology analysis
homology sequences blast sequence homology written 13 months ago by minasmayth • 0 • updated 13 months ago by Biostar ♦♦ 20
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0
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310
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What kind of protein matrix substitution use for blastX divergent sequences
matrix homology diamond blast written 14 months ago by Darill • 40
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2
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How To Find Human Homologs For Proteins From Candida Albicans
homology protein human written 6.6 years ago by nepalis • 10 • updated 15 months ago by Biostar ♦♦ 20
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539
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Job: Job: Ensembl Bioinformatician - comparative genomics
alignments ensembl homology job gene tree written 17 months ago by Emily_Ensembl ♦ 20k
12
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5
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3.2k
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5 follow
5
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How To Find Conserved Regulatory Elements Among Different Genomes?
homology comparative written 9.2 years ago by Anima Mundi • 2.6k • updated 18 months ago by Biostar ♦♦ 20
46
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6
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9 follow
6
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Levels Of Gene Homologous-Ness?
gene homology orthologues written 9.8 years ago by Mike Dewar • 1.6k • updated 19 months ago by RamRS ♦ 26k
8
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1
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843
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8 follow
1
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Are these two proteins homolog?
homology written 19 months ago by utsafar • 40 • updated 19 months ago by Bharat Iyengar • 270
1
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1
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387
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1
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Protists homology analysis
protists homology written 20 months ago by agata88 • 790 • updated 20 months ago by h.mon ♦ 29k
4
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1
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697
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1
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Strategies for identifying as many homologs as possible
homology phylogenetics est msa blast written 22 months ago by michael • 0 • updated 22 months ago by Michael Dondrup ♦ 47k
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0
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627
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Best way to identify proteins within a family?
domain orthologs oma homology hmmer written 22 months ago by Solowars • 50
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0
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553
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Protein isoforms and paralog sequences
isoforms sequence homology enzyme written 22 months ago by Maverick • 20
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459
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UBERON. A way to retrieve relationships?
gene expression homology uberon go ontology written 23 months ago by Solowars • 50
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497
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Locus_tag mapping between organisms based on homology
homology locus_tag written 24 months ago by Benni • 30 • updated 24 months ago by h.mon ♦ 29k
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464
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convert amino acids between species
gene amino acid homology variants written 24 months ago by igor ♦ 9.9k
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646
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Finding homologous genes in different bacteria serovars from reference locus
gene alignment bacteria homology written 2.2 years ago by alejoaguirrea • 0
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1
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Deleting constant site columns OK?
phylogeny alignment homology written 2.3 years ago by dieter • 0
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0
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990
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Confusion between PyRosetta and Rosetta and how to operate PyRosetta
homology rosetta pyrosetta protein assembly written 2.4 years ago by skim • 30
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1
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759
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1
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RSMD in homology modelling protein
protien rsmd homology written 2.5 years ago by l.souza • 70 • updated 2.5 years ago by Joe ♦ 16k
2
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1
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871
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1
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Efficient way to check pdb enzyme protein models with certain mutations if the active site still works?
pdb model homology enzyme written 2.5 years ago by skim • 30 • updated 2.5 years ago by Joe ♦ 16k
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How do I do protein structure homology-modelling similar to SWISS-MODEL without using a web api for computing and only use online databases for searching templates?
homology swiss-model modelling protein written 2.6 years ago by skim • 30 • updated 2.6 years ago by Joe ♦ 16k
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