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Ion Torrent vs 454, Illumina and Pacbio reads

ion torrent illumina 454 ion pacbio written 6 weeks ago by gustavojorge080 • 0 • updated 6 weeks ago by h.mon ♦ 26k

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151

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Mira assembler with IonTorrent

assembly mira ion written 8 weeks ago by gustavojorge080 • 0 • updated 8 weeks ago by Kevin • 630

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1.8k

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Strange variant call it show a indel but looks like a SNP

indel snp variant ion caller written 4.9 years ago by cristianrohr768 • 30 • updated 4 months ago by Biostar ♦♦ 20

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469

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Read simulators for Ion Torrent platform specific for WES

torrent simulation wes ion amliseq written 15 months ago by world_genesis • 0

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980

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ion ampliseq comprehensive cancer panel

sequencing sequence ion cnv exon written 3.4 years ago by mittu1602 • 170

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1.9k

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Ion Torrent sample data

torrent alignment tool sample ion written 3.5 years ago by Milan Domazet • 10 • updated 3.5 years ago by Keith Callenberg • 890

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2.3k

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Ion semiconductor sequencing - hydrogen ion? water?

next-gen semiconductor ion sequencing written 4.6 years ago by Salut • 0 • updated 4.6 years ago by Devon Ryan ♦ 91k

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2.0k

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What does Read Depth mean in Torrent Browser Analysis Report? Why it is shown as blank after complete sequencing?

ngs chip-seq ion rna-seq written 4.8 years ago by Abdul Rafay Khan • 1.0k • updated 4.7 years ago by Biostar ♦♦ 20

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Recent Replies

C: Trascription factor binding sites prediction using FIMO by Eisuan • 0
It is funny because all the time I try to apply some tools that search matches in a database usin...
C: Assembling of 22 reads from D-LOOP failed by netsam • 10
There was no scaffold and no contigs. I used Spades embedded in Galaxy. Last rows of error log f...
C: Problem with font size in a tree by RamRS ♦ 23k
Please see https://www.biostars.org/p/309884/ to add your images properly. You need **the direct ...
A: selection soft Power in WGCNA by andres.firrincieli • 40
I think you are working with transcripts and not genes; 60000 seems a little to much. By the way,...
C: Error during parsing PDB using Biopython. by jrj.healey ♦ 13k
Can you provide an example of a file that works and one that doesn’t?
C: Why does my TOM network heatmap for WGCNA display red background and golden modu by Kevin Blighe ♦ 46k
Please Accept an answer (and up-vote it) if it has helped to solve the issue.
C: Why does my TOM network heatmap for WGCNA display red background and golden modu by kingwind333 • 0
Yes u r right. Then I won't bother either. Thank you!
A: Installing and importing viennaRNA to python in windows by ofek.schnitzer • 10
If anyone else encounters this problem I found a workaround: after downloading and installing the...
C: Why does my TOM network heatmap for WGCNA display red background and golden modu by andres.firrincieli • 40
I could be wrong but If you followed every step of the tutorial, I would not bother too much abou...
A: High CDS Count in my assembled Genome using Nanopore reads (ONT) data by h.mon ♦ 26k
As this is a Nanopore-only assembly, there are many errors (mainly indels) which negatively affec...
C: Assembling of 22 reads from D-LOOP failed by h.mon ♦ 26k
What do you mean by "failed"? What was the result? Two contigs? Three contigs? No contigs at all?...
C: Empty y-axis when plotting deeptools computeMatrix mat file. by RamRS ♦ 23k
To mark your question as Solved, please accept an answer that solves it. You can accept multiple ...

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