Showing: mutectreset
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Running time in different callers
varscan snv mutect wgs written 7 months ago by A3.6k
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Gold Standard for Human cancer exome sequencing
somatic wes varscan mutect cancer written 3.1 years ago by Jerome Lin20 • updated 8 months ago by Biostar ♦♦ 20
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GATK 4 Mutect2 gives too much low depth variants
mutect written 11 months ago by Zhizhong270 • updated 11 months ago by Charles Warden7.5k
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Log-odds based filtering and pairHMM alignment during local realignment
gatk mutect bayes written 20 months ago by CY460 • updated 19 months ago by Biostar ♦♦ 20
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Mutect2 filtering log-odds (LOD) threshold
gatk mutect written 20 months ago by CY460
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identifying TP53 germline mutations which are also in tumor cells.
somatic germline tp53 mutect varscan written 22 months ago by lait140 • updated 22 months ago by Noushin N560
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Mutect 2 on WGS data takes too long to run
wgs mutect written 2.3 years ago by DVA530 • updated 2.3 years ago by donfreed1.5k
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Converting MuTect v1 text outputs to VCF
vcf snp mutect written 2.5 years ago by MMa280
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HG19 Cosmic VCF
vcf cosmic cga mutect written 4.7 years ago by M. Khan0
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Error with MuTect: SAM/BAM file SAMFileReader is malformed
software error samfilereader mutect written 4.9 years ago by eem03060 • updated 4.9 years ago by Devon Ryan93k
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muTect analysis, error
exome software error mutect written 5.1 years ago by Chirag Nepal2.2k • updated 4.9 years ago by RamRS25k
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hg19_cosmic_v54_120711.vcf for mutect analysis
exome mutect written 5.1 years ago by Chirag Nepal2.2k • updated 5.1 years ago by arno.guille400
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calling somatic mutations on ion proton data
ion proton mutect somatic mutation written 5.4 years ago by CHANG40 • updated 5.2 years ago by Bontus80
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