Showing: mutectreset
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Gold Standard for Human cancer exome sequencing
somatic wes varscan mutect cancer written 2.5 years ago by Jerome Lin20 • updated 17 days ago by Biostar ♦♦ 20
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GATK 4 Mutect2 gives too much low depth variants
mutect written 4 months ago by Zhizhong240 • updated 4 months ago by Charles Warden6.6k
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Log-odds based filtering and pairHMM alignment during local realignment
gatk mutect bayes written 13 months ago by CY310 • updated 11 months ago by Biostar ♦♦ 20
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Mutect2 filtering log-odds (LOD) threshold
gatk mutect written 13 months ago by CY310
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identifying TP53 germline mutations which are also in tumor cells.
somatic germline tp53 mutect varscan written 14 months ago by lait130 • updated 14 months ago by Noushin N550
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Mutect 2 on WGS data takes too long to run
wgs mutect written 20 months ago by DVA510 • updated 20 months ago by donfreed1.4k
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Converting MuTect v1 text outputs to VCF
vcf snp mutect written 22 months ago by MMa260
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40 follow
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HG19 Cosmic VCF
vcf cosmic cga mutect written 4.1 years ago by M. Khan0
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Error with MuTect: SAM/BAM file SAMFileReader is malformed
software error samfilereader mutect written 4.2 years ago by eem03060 • updated 4.2 years ago by Devon Ryan89k
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muTect analysis, error
exome software error mutect written 4.5 years ago by Chirag Nepal2.2k • updated 4.3 years ago by RamRS21k
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hg19_cosmic_v54_120711.vcf for mutect analysis
exome mutect written 4.5 years ago by Chirag Nepal2.2k • updated 4.5 years ago by arno.guille400
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calling somatic mutations on ion proton data
ion proton mutect somatic mutation written 4.7 years ago by CHANG40 • updated 4.6 years ago by Bontus80
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