Showing: mutectreset
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Log-odds based filtering and pairHMM alignment during local realignment
gatk mutect bayes written 3 months ago by CY130 • updated 6 weeks ago by Biostar ♦♦ 20
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Mutect2 filtering log-odds (LOD) threshold
gatk mutect written 3 months ago by CY130
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identifying TP53 germline mutations which are also in tumor cells.
somatic germline tp53 mutect varscan written 4 months ago by lait80 • updated 4 months ago by Noushin N520
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Mutect 2 on WGS data takes too long to run
wgs mutect written 10 months ago by DVA450 • updated 10 months ago by donfreed1.2k
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Converting MuTect v1 text outputs to VCF
vcf snp mutect written 12 months ago by MMa240
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Gold Standard for Human cancer exome sequencing
somatic wes varscan mutect cancer written 19 months ago by Jerome Lin20 • updated 19 months ago by harold.smith.tarheel4.1k
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HG19 Cosmic VCF
vcf cosmic cga mutect written 3.3 years ago by M. Khan0
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Error with MuTect: SAM/BAM file SAMFileReader is malformed
software error samfilereader mutect written 3.4 years ago by eem03060 • updated 3.4 years ago by Devon Ryan81k
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muTect analysis, error
exome software error mutect written 3.7 years ago by Chirag Nepal2.1k • updated 3.5 years ago by Ram15k
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hg19_cosmic_v54_120711.vcf for mutect analysis
exome mutect written 3.7 years ago by Chirag Nepal2.1k • updated 3.7 years ago by arno.guille390
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calling somatic mutations on ion proton data
ion proton mutect somatic mutation written 3.9 years ago by CHANG40 • updated 3.8 years ago by Bontus80
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