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Job: Senior Bioinformatician-Malaria Genomics, The Sanger Institute, Cambridge, UK
perl python java next-gen job written 3 days ago by Recruit • 190 • updated 3 days ago by genomax ♦ 30k
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vote
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answer
162
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1
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running a perl script multiple times; input and output files are required
perl parallelization written 5 days ago by Ana • 10 • updated 5 days ago by Pierre Lindenbaum ♦ 96k
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3
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136
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3
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Problem in extraction of values from a list
perl grep vlookup written 12 days ago by Vinay Singh • 30
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3
answers
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How To Programmatically Retrieve A Batch Of Fasta Sequences From For A List Of Uniprot Accession Ids?
perl webservice uniprot written 3.5 years ago by Superbest • 110 • updated 15 days ago by deepamahm.iisc • 0
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GFF-Ex Issues in extracting intergenic regions
perl bioinformatics gff-ex unix R written 6 weeks ago by Diesel • 0 • updated 21 days ago by achyR • 0
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2
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How to filter mutant allele frequency in Variant Effect Predictor (VEP)?
perl vcf vep ensembl written 5 weeks ago by kin182 • 0 • updated 5 weeks ago by EnsemblWill • 540
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2
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181
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9 follow
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Compare two matrix
perl matrix written 5 weeks ago by Amy • 0 • updated 5 weeks ago by Paul • 620
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Replace Sequence IDs in many text files (newick format) - Change script
perl replace tree newick written 4 months ago by ibasan • 30 • updated 7 weeks ago by Biostar ♦♦ 20
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1
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141
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1
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Extract Intergenic Sequences from GenBank File with Perl
perl bioinfomratics written 7 weeks ago by Diesel • 0 • updated 7 weeks ago by Pierre Lindenbaum ♦ 96k
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Pattren counter in fasta file
perl fasta regular expression counter awk written 7 weeks ago by adityagt15 • 0 • updated 7 weeks ago by cpad0112 • 1.1k
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restructure rows and columns in perl or python (Interleaving columns by row pairs)
perl python rows columns dataframe written 7 weeks ago by Ana • 10 • updated 7 weeks ago by WouterDeCoster ♦ 20k
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Converting a big SNP genotype table to plink (.ped) file for ADMIXTURE
perl snp admixture plink ped format written 8 weeks ago by Santiago Montero-Mendieta • 70 • updated 7 weeks ago by Philipp Bayer ♦ 4.5k
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Match And Merge Information By Id In Two Files
perl id written 3.5 years ago by liupfskygre • 180 • updated 8 weeks ago by Rashedul Islam • 160
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Job: Data Scientist (Jones Group), Wellcome Trust Sanger Institute , Cambridge, UK
perl R python job linux written 8 weeks ago by Recruit • 190 • updated 8 weeks ago by genomax ♦ 30k
12
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4
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9 follow
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Compare pairs of key/value of perl hash tables
perl snps hashes written 9 weeks ago by Amy • 0 • updated 8 weeks ago by EagleEye • 4.3k
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213
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Job: Senior Bioinformatician-Malaria Genomics
perl phyton java job written 9 weeks ago by Recruit • 190
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Tool: Computational Suite For Bioinformaticians and Biologists -- CSBB [Version 2.1]
perl R tool rna-seq downstreamanalysis written 10 weeks ago by praneet007 • 30
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How To Extract Just The Coordinate Values From A Pdb File, Using Perl Only?
pdb perl coordinates protein parsing written 6.3 years ago by Sakshi • 20 • updated 10 weeks ago by Biostar ♦♦ 20
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Job: Senior Bioinformatician - Mutographs of Cancer
perl julia java job phyton written 10 weeks ago by Recruit • 190
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2
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193
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Compare fasta header with id fasta sequence
perl rna-seq written 11 weeks ago by Amy • 0 • updated 11 weeks ago by shenwei356 • 3.1k
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11 follow
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How to extract the longest isoform from multi fasta file
fasta perl extract isoform python written 3.0 years ago by jon.brate • 130 • updated 11 weeks ago by Biostar ♦♦ 20
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217
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5 follow
1
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How to cut/extract/splice different region from a single fasta sequence.
perl command programming shell bioinformatics written 11 weeks ago by sanjeet00001992 • 0 • updated 11 weeks ago by Istvan Albert ♦♦ 73k
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188
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Perl programming sequence
perl sequence galaxy chip-seq written 11 weeks ago by titoo • 0 • updated 11 weeks ago by Pierre Lindenbaum ♦ 96k
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1
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168
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1
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Reduce time execution
perl sequence rna-seq written 12 weeks ago by Amy • 0 • updated 12 weeks ago by Michael Dondrup ♦ 42k
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181
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Problem with printing continuous minimum and maximum polypurine stretches using sliding window
perl sequence written 3 months ago by vasubio.mathi • 0
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192
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Get Get GC Content from UCSC with perl script (mysql)
perl gc content myql ucsc written 3 months ago by Shicheng Guo • 4.4k
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206
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How to convert a Map file to BED using perl?
perl written 3 months ago by lexauex • 0 • updated 3 months ago by Petr Ponomarenko • 2.4k
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5 follow
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extract sample DP values from VCF
vcf perl vcf tools vcf filtering written 3 months ago by Ana • 10 • updated 3 months ago by noeD • 50
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Tool: CSBB-v2.0 [Computational Suite for Bioinformaticians and Biologists version 2]
tool python perl R differentialexpression rna-seq written 3 months ago by praneet007 • 30
2
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5 follow
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How To Write Sequences To Fasta Format With No Linebreaks (Wide Format) Using Bioperl
perl fasta bioperl written 4.4 years ago by angel.roey • 0 • updated 3 months ago by Biostar ♦♦ 20
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