Showing: picardreset
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3
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Dictionary size problem in Picard CalculateHsMetrics
software error picard written 18 days ago by nicola.licheri0 • updated 18 days ago by Devon Ryan79k
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90
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picard tools HsMetrics not using duplicate reads to calculate coverage
duplicates picard hsmetrics written 2.1 years ago by nbhardwaj100 • updated 5 weeks ago by Biostar ♦♦ 20
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175
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Picard Mark Duplicates
picard markduplicates written 5 weeks ago by Varun Gupta1000
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4
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Mystery: What is going on with this Insert Size Metrics Histogram
insert size picard alignment written 17 months ago by dansapozhnikov0 • updated 6 weeks ago by Biostar ♦♦ 20
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picard markduplicates got stuck
alignment picard written 8 weeks ago by spz1st20
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1
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198
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Picard MarkDuplicates fatal error
picard markduplicates written 9 weeks ago by fwuffy50 • updated 9 weeks ago by h.mon15k
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1
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115
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Running Picard as an Executable Program
picard written 10 weeks ago by oars110 • updated 9 weeks ago by h.mon15k
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138
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1
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Adding Read Groups to Merged Bams
rg picard read group written 11 weeks ago by miles.thorburn10 • updated 11 weeks ago by Pierre Lindenbaum107k
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172
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2
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224
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Picard Installation problem - older version
picard written 3 months ago by genomics Newbie0 • updated 3 months ago by Pierre Lindenbaum107k
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1
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179
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1
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Picard ValidateSamFile error
picard bam written 4 months ago by boyu930 • updated 4 months ago by Pierre Lindenbaum107k
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166
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1
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PICARD tools param database
picard written 4 months ago by win740 • updated 4 months ago by Raony GuimarĂ£es820
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218
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0
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1
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0
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270
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Picard CollectHsMetrics malfunctioning
picard ngs wes collecthsmetrics written 5 months ago by erarroji0 • updated 5 months ago by Pierre Lindenbaum107k
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338
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11
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5 follow
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Piping Markduplicates
exome ngs picard written 4.6 years ago by Sam2.1k • updated 6 months ago by rmf270
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337
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2
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0
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0
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433
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Issues running RNAseqc on my bam file
picard qc bam rnaseqc rna written 7 months ago by vineelagangalapudi0 • updated 7 months ago by Pierre Lindenbaum107k
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6 follow
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Estimating Insert Size From Paired End Data.
picard paired-end alignment written 4.2 years ago by geek_y8.5k • updated 7 months ago by jmodlis0
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3
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7 follow
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picard installation failure
software error picard written 8 months ago by sanariyaz2110 • updated 7 months ago by simon.vanheeringen150
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estimated library size in Picard
picard estimated library size written 7 months ago by dattatreya.m0 • updated 7 months ago by Brian Bushnell15k
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1
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Picard alignment statistics error
software error last picard samtools alignment written 2.2 years ago by mia70 • updated 7 months ago by Dan D6.4k
3
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398
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1
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bam to fastq conversion, number of reads do not match
picard sam bam rna-seq written 8 months ago by Anushka20 • updated 8 months ago by Pierre Lindenbaum107k
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261
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1
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rna seq genome coverage
gatk picard coverage rna-seq written 9 months ago by ea140210 • updated 9 months ago by geek_y8.5k
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2
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710
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Duplicates in ATAC-seq data
duplicates picard atac-seq samtools rmdup written 10 months ago by rbronste160 • updated 10 months ago by James Ashmore2.3k
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1
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302
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Picard CollectAlignmentMetrics Output
picard collectalignmentmetrics written 10 months ago by fiona.newberry70 • updated 10 months ago by Pierre Lindenbaum107k
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428
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1
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User-defined coverage in CollectHsMetrics [Picard]
next-gen broadinstitute picard coverage written 10 months ago by anu014140 • updated 10 months ago by Pierre Lindenbaum107k
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