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LiftoverVcf no output
genome assembly picard liftover sequencing written 7 months ago by brismiller40 • updated 7 weeks ago by Biostar ♦♦ 20
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Error while merging multiple vcf files using Picard MergeVcfs
genome gatk picard tool snp written 3 months ago by nitinra10 • updated 9 weeks ago by haizi.zh10
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Picard's AddOrReplaceReadGroups gives invalid argument error
picard addreplacereadgroups written 11 weeks ago by MAPK1.7k • updated 11 weeks ago by a.alnawfal.1992110
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merging multiple vcfs by column in Picard
vcf genome picard snp written 3 months ago by nitinra10 • updated 3 months ago by Pierre Lindenbaum133k
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Trouble running vcf2bam jvarkit tool
vcf jvarkit vcf2bam picard written 4 months ago by amitfinkelstein0 • updated 4 months ago by Pierre Lindenbaum133k
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No space left on device error with deeptools bamCompare
software error deeptools picard terminal bash written 6 months ago by jennxyzhang0 • updated 5 months ago by Biostar ♦♦ 20
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from unmapped bam file picard samtofastq produced no output
bedtools picard rna-seq written 10 months ago by Rashedul Islam390 • updated 8 months ago by kunleisaac820
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read group, fastq files, and multiple run ids
picard gatk fastq next-gen readgroups written 11 months ago by Cricket10 • updated 9 months ago by Biostar ♦♦ 20
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Picard HsMetrics on Whole Genome (no bedfile) need "HS_Penalty_20X & HS_LIBRARY_SIZE"
gatk picard written 3.4 years ago by Jon1720 • updated 9 months ago by Biostar ♦♦ 20
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Failed to liftover from hg38 to hg19
crossmap picard written 2.1 years ago by BAGeno170 • updated 9 months ago by Biostar ♦♦ 20
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Picard Base Distribution by Cycle and adapter contamination
picard atac-seq written 10 months ago by ElCascador20 • updated 10 months ago by h.mon32k
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PCR duplicate reads - samtools
flagstats duplicated picard samtools written 11 months ago by dina91n0 • updated 11 months ago by swbarnes29.4k
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