Showing: picardreset
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Picard Installation problem - older version
picard written 27 days ago by genomics Newbie0 • updated 27 days ago by Pierre Lindenbaum104k
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Picard ValidateSamFile error
picard bam written 6 weeks ago by boyu930 • updated 6 weeks ago by Pierre Lindenbaum104k
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PICARD tools param database
picard written 7 weeks ago by win720 • updated 7 weeks ago by Raony GuimarĂ£es780
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Picard CollectHsMetrics malfunctioning
picard ngs wes collecthsmetrics written 11 weeks ago by erarroji0 • updated 11 weeks ago by Pierre Lindenbaum104k
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5 follow
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Piping Markduplicates
exome ngs picard written 4.4 years ago by Sam2.1k • updated 3 months ago by rmf170
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Issues running RNAseqc on my bam file
picard qc bam rnaseqc rna written 4 months ago by vineelagangalapudi0 • updated 4 months ago by Pierre Lindenbaum104k
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6 follow
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Estimating Insert Size From Paired End Data.
picard paired-end alignment written 4.0 years ago by geek_y8.2k • updated 4 months ago by jmodlis0
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7 follow
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picard installation failure
software error picard written 5 months ago by sanariyaz2110 • updated 4 months ago by simon.vanheeringen110
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estimated library size in Picard
picard estimated library size written 4 months ago by dattatreya.m0 • updated 4 months ago by Brian Bushnell15k
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Picard alignment statistics error
software error last picard samtools alignment written 24 months ago by mia70 • updated 4 months ago by Dan D6.3k
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bam to fastq conversion, number of reads do not match
picard sam bam rna-seq written 5 months ago by Anushka20 • updated 5 months ago by Pierre Lindenbaum104k
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rna seq genome coverage
gatk picard coverage rna-seq written 6 months ago by ea140210 • updated 6 months ago by geek_y8.2k
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Duplicates in ATAC-seq data
duplicates picard atac-seq samtools rmdup written 7 months ago by rbronste160 • updated 7 months ago by James Ashmore2.3k
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Picard CollectAlignmentMetrics Output
picard collectalignmentmetrics written 7 months ago by fiona.newberry70 • updated 7 months ago by Pierre Lindenbaum104k
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User-defined coverage in CollectHsMetrics [Picard]
next-gen broadinstitute picard coverage written 7 months ago by anu014140 • updated 7 months ago by Pierre Lindenbaum104k
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Compute inner mate distance for paired-end reads in a bam file
paired picard bam written 8 months ago by bioinfo890 • updated 8 months ago by Devon Ryan76k
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Efficient And Fastest Way To Sort Large (>100Gb) Bam Files?
picard samtools bam sort written 5.9 years ago by Rm7.6k • updated 8 months ago by cmdcolin700
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Does Markduplicates Work If Mate Pair Information Is Not 'Fixed'?
duplicates picard markduplicates bam written 5.4 years ago by ian.streeter10 • updated 8 months ago by Biostar ♦♦ 20
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some problem about VCF produced by PICARD VARSCAN SOMATIC command
vcf somatic picard written 18 months ago by yanghao0 • updated 8 months ago by jessieyuan6660
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7 follow
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Getting error in running GATK (GenomeAnalysisTK-3.7)?
gatk picard mutation rna-seq written 11 months ago by Mask170 • updated 8 months ago by LLinging000
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CollectAlignmentSummaryMetrics from Picard
picard collectalignmentsummarymetrics written 9 months ago by David_emir230 • updated 9 months ago by Pierre Lindenbaum104k
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