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<prev • 19 results • page 1 of 1 • next >
0
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single cell RNA-seq pipeline
scrna-seq written 4 weeks ago by Bogdan • 550 • updated 4 weeks ago by Mike • 1.0k
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151
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How to assess extent of cell-type admixtures from bulk RNA-seq data for a single tissue?
deconvolution scrna-seq cellmix rna-seq written 11 weeks ago by nancy • 60 • updated 11 weeks ago by YaGalbi • 1.3k
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271
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lack of replicates in single-cell RNA-seq
scrna-seq single-cell rna-seq written 3 months ago by igor ♦ 6.5k • updated 3 months ago by Friederike • 2.0k
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3
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655
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9 follow
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why PCA for RNA-Seq but tSNE for scRNA-seq?
scrna-seq pca tsne rna-seq written 3 months ago by CY • 140 • updated 3 months ago by harold.smith.tarheel • 4.2k
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For Mean Expression/FC Calculations in scRNA-seq, should I use All cells or only Expressed Cells?
scrna-seq next-gen monocle written 3 months ago by achits • 20 • updated 3 months ago by Charles Warden ♦ 5.1k
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6 follow
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Finding Variable Genes in Seurat, scRNA-seq
scrna-seq rna-seq seurat written 12 months ago by asyndeton17 • 10 • updated 3 months ago by PaulG • 0
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Using marker genes to identify cell cluster
scrna-seq findallmarkers rna-seq seurat tsne plot written 3 months ago by Behram Radmanesh • 0
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Number of genes/transcript detected in scRNA seq
scrna-seq gene rna-seq written 4 months ago by naman.sep • 0
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scRNA-seq data processing from 10X device
scrna-seq rna-seq 10x genomics written 4 months ago by nikitavlassenko • 0 • updated 4 months ago by genomax ♦ 54k
3
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693
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Normalization of single cell RNA-seq data with different read depths
scrna-seq rna-seq written 9 months ago by mariah • 0
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Differential Gene Expression Analysis using two distinct scRNA-seq datasets
scrna-seq differential gene expression rna-seq written 9 months ago by Eskimo • 60
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5 follow
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Making a 3d tSNE Plot in Seurat for scRNA-seq
scrna-seq tsne rna-seq seurat written 11 months ago by asyndeton17 • 10 • updated 9 months ago by garyhokawai • 30
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Tool: DASC -- detecting hidden batch effects in gene expression datasets (Array/RNA-Seq/scRNA-Seq)
scrna-seq R batcheffects tool rna-seq written 14 months ago by Ar • 770
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Analyzing MARS-seq (single-cell RNA seq) fastq files
single-cell scrna-seq alignment rna-seq written 11 months ago by Eldad Shulman • 0
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Combining Conditions in scRNA-seq (Drop-seq) for Analysis
scrna-seq drop-seq rna-seq written 12 months ago by asyndeton17 • 10 • updated 12 months ago by Devon Ryan ♦ 82k
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Demultiplexing Conceptual Issue
scrna-seq barcode rna-seq index written 12 months ago by asyndeton17 • 10
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482
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RNA-Seq simulator with umi barcoding capabilty
scrna-seq unique molecular identifier rna-seq written 14 months ago by pyKey • 30
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Single cell RNA-seq with ERCC spike-ins: appropriate normalization methods for cell types investigation
scrna-seq normalization written 2.3 years ago by madk00k • 330 • updated 2.3 years ago by Shicheng Guo • 6.1k
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Best way to present the single cell RNA-seq data and bulk RNA-seq expression data together
scrna-seq rna-seq heatmap written 2.3 years ago by Naresh D J • 50
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