Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: scrna-seq • reset
or   Classic search
<prev • 25 results • page 1 of 1 • next >
4
votes
1
answer
965
views
6 follow
1
answer
Normalization of single cell RNA-seq data with different read depths
scrna-seq rna-seq written 11 months ago by mariah • 10 • updated 18 days ago by wt215 • 0
0
votes
0
answers
96
views
0
answers
scRNA-seq, filter low expressed genes based on RPKM value
scrna-seq rpkm expression filtering written 19 days ago by g.e.novakovsky • 20
1
vote
1
answer
107
views
1
answer
Fit GLM using part of the data
scrna-seq glm edger written 4 weeks ago by rasmus.agren • 0 • updated 4 weeks ago by Kevin Blighe ♦ 30k
4
votes
1
answer
152
views
1
answer
Faster UMI extraction from scRNA-Seq data
scrna-seq umi umi_tools rna-seq written 5 weeks ago by paulranum11 • 10 • updated 5 weeks ago by benformatics • 290
1
vote
0
answers
233
views
0
answers
What are the difference between Seurat and Cell Ranger pipeline in processing single cell RNA-seq data
scrna-seq sequence leukemia rna-seq written 7 weeks ago by bwang258 • 10 • updated 6 weeks ago by Biostar ♦♦ 20
0
votes
1
answer
112
views
1
answer
how to do TSNEPlot which differentiate the sample and cluster at the same time in scRNA-seq data?
scrna-seq written 6 weeks ago by biologo • 10 • updated 6 weeks ago by ApoorvaB • 140
0
votes
2
answers
151
views
2
answers
Differential expression with MAST using scran-normalized data
scrna-seq mast scran written 7 weeks ago by smt8n • 0
28
votes
5
answers
1.6k
views
15 follow
5
answers
why PCA for RNA-Seq but tSNE for scRNA-seq?
scrna-seq pca tsne rna-seq written 5 months ago by CY • 200 • updated 7 weeks ago by Charles Warden ♦ 5.5k
0
votes
1
answer
209
views
1
answer
single cell RNA-seq pipeline
scrna-seq written 3 months ago by Bogdan • 660 • updated 3 months ago by Mike • 1.0k
1
vote
1
answer
245
views
1
answer
How to assess extent of cell-type admixtures from bulk RNA-seq data for a single tissue?
deconvolution scrna-seq cellmix rna-seq written 4 months ago by nancy • 60 • updated 4 months ago by YaGalbi • 1.3k
6
votes
1
answer
472
views
1
answer
lack of replicates in single-cell RNA-seq
scrna-seq single-cell rna-seq written 5 months ago by igor ♦ 6.8k • updated 5 months ago by Friederike • 2.3k
0
votes
1
answer
205
views
1
answer
For Mean Expression/FC Calculations in scRNA-seq, should I use All cells or only Expressed Cells?
scrna-seq next-gen monocle written 5 months ago by achits • 20 • updated 5 months ago by Charles Warden ♦ 5.5k
2
votes
1
answer
2.0k
views
7 follow
1
answer
Finding Variable Genes in Seurat, scRNA-seq
scrna-seq rna-seq seurat written 14 months ago by asyndeton17 • 10 • updated 5 months ago by PaulG • 0
1
vote
0
answers
493
views
0
answers
Using marker genes to identify cell cluster
scrna-seq findallmarkers rna-seq seurat tsne plot written 5 months ago by Behram Radmanesh • 0
0
votes
0
answers
121
views
0
answers
Number of genes/transcript detected in scRNA seq
scrna-seq gene rna-seq written 6 months ago by naman.sep • 0
7
votes
2
answers
654
views
2
answers
scRNA-seq data processing from 10X device
scrna-seq rna-seq 10x genomics written 6 months ago by nikitavlassenko • 10 • updated 6 months ago by genomax ♦ 57k
0
votes
0
answers
430
views
0
answers
Differential Gene Expression Analysis using two distinct scRNA-seq datasets
scrna-seq differential gene expression rna-seq written 11 months ago by Eskimo • 90
2
votes
2
answers
2.5k
views
5 follow
2
answers
Making a 3d tSNE Plot in Seurat for scRNA-seq
scrna-seq tsne rna-seq seurat written 14 months ago by asyndeton17 • 10 • updated 12 months ago by garyhokawai • 30
1
vote
0
answers
724
views
0
answers
Tool: DASC -- detecting hidden batch effects in gene expression datasets (Array/RNA-Seq/scRNA-Seq)
scrna-seq R batcheffects tool rna-seq written 16 months ago by Ar • 790
0
votes
0
answers
893
views
0
answers
Analyzing MARS-seq (single-cell RNA seq) fastq files
single-cell scrna-seq alignment rna-seq written 14 months ago by Eldad Shulman • 0
1
vote
1
answer
804
views
1
answer
Combining Conditions in scRNA-seq (Drop-seq) for Analysis
scrna-seq drop-seq rna-seq written 14 months ago by asyndeton17 • 10 • updated 14 months ago by Devon Ryan ♦ 85k
0
votes
1
answer
491
views
1
answer
Demultiplexing Conceptual Issue
scrna-seq barcode rna-seq index written 14 months ago by asyndeton17 • 10
0
votes
0
answers
526
views
0
answers
RNA-Seq simulator with umi barcoding capabilty
scrna-seq unique molecular identifier rna-seq written 17 months ago by pyKey • 30
2
votes
1
answer
2.2k
views
1
answer
Single cell RNA-seq with ERCC spike-ins: appropriate normalization methods for cell types investigation
scrna-seq normalization written 2.4 years ago by madk00k • 330 • updated 2.4 years ago by Shicheng Guo • 6.9k
1
vote
0
answers
1.7k
views
0
answers
Best way to present the single cell RNA-seq data and bulk RNA-seq expression data together
scrna-seq rna-seq heatmap written 2.5 years ago by Naresh D J • 50
<prev • 25 results • page 1 of 1 • next >
Recent Votes
Recent Locations • All »
  • Duarte, CA, just now
  • United States, 2 minutes ago
  • San Diego, CA, 5 minutes ago
  • Brazil, 6 minutes ago
  • USA, 7 minutes ago
  • United Kingdom, 7 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1120 users visited in the last hour