Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: scrna-seq • reset
or   Classic search
<prev • 92 results • page 1 of 4 • next >
0
votes
1
answer
65
views
1
answer
single cell RNA-seq
single-cell scrna-seq rna-seq written 1 day ago by nancy • 70 • updated 15 hours ago by jared.andrews07 • 3.9k
0
votes
0
answers
59
views
0
answers
Data mining to generate a scRNA-seq coexpression network analysis for selected genes
scrna-seq rna-seq coexpression written 7 days ago by sissypants :) • 0
3
votes
2
answers
67
views
2
answers
Seurat sctransform return.only.var.genes = FALSE
scrna-seq sctransform seurat written 12 days ago by Lucy • 40 • updated 12 days ago by jared.andrews07 • 3.9k
1
vote
1
answer
102
views
1
answer
Confusion about FindMarkers(), FindVariableFeatures(), RunTSNE(), and RunUMAP() in seurat package
scrna-seq kallisto|bustools seurat written 14 days ago by F. Golestan • 20 • updated 14 days ago by jared.andrews07 • 3.9k
4
votes
1
answer
177
views
1
answer
RNA velocity on 5' 10x data?
scrna-seq rna velocity rna-seq written 15 days ago by Lucy • 40 • updated 15 days ago by jared.andrews07 • 3.9k
1
vote
1
answer
92
views
1
answer
Differential-expression analysis using logistic regression in Seurat - glm.fit warning message
scrna-seq differential-expression analysis seurat written 26 days ago by Lucy • 40 • updated 26 days ago by jared.andrews07 • 3.9k
2
votes
0
answers
427
views
5 follow
0
answers
What to think about when treating scRNA-Seq data as bulk RNA-Seq data
scrna-seq bulk rna-seq written 7 months ago by chilifan • 70 • updated 29 days ago by danvoronov • 10
0
votes
2
answers
126
views
2
answers
Does Harmony batch correction for scRNA-seq require the same populations to be present in all samples?
scrna-seq single-cell batch correction harmony written 4 weeks ago by Lucy • 40
2
votes
1
answer
130
views
1
answer
Clustering resolution single-cell RNA-seq
scrna-seq single-cell rna-seq clustering written 5 weeks ago by Lucy • 40 • updated 5 weeks ago by jared.andrews07 • 3.9k
6
votes
1
answer
231
views
1
answer
the analysis of multiple samples of 10X scRNA-seq
scrna-seq scrnaseq written 5 weeks ago by Bogdan • 880 • updated 5 weeks ago by geek_y ♦ 10.0k
2
votes
1
answer
192
views
5 follow
1
answer
Bonferroni multiple corrections question
scrna-seq rna-seq gsea statistics written 5 weeks ago by jevanveen • 20 • updated 5 weeks ago by dsull • 450
1
vote
0
answers
215
views
0
answers
Understanding kallisto qc metrics in run_info.json
scrna-seq alignment kallisto rna-seq written 6 weeks ago by MutationalMeltdown • 30
0
votes
0
answers
121
views
0
answers
Downsampling reads vs. Seurat normalisation
scrna-seq dropletutils single-cell rna-seq written 5 weeks ago by Lucy • 40
0
votes
0
answers
133
views
0
answers
Job: Research Scientist Bioinformatics working on scRNA-Seq at Evotec SE (Goettingen, DE)
scrna-seq R job rna-seq written 5 weeks ago by Manuel Landesfeind • 1.2k
2
votes
1
answer
121
views
1
answer
Harmony batch correction vs. regressing out donor effect in Seurat
scrna-seq harmony seurat rna-seq batch correction written 5 weeks ago by Lucy • 40 • updated 5 weeks ago by jared.andrews07 • 3.9k
0
votes
0
answers
53
views
0
answers
Dual Y-axis in Seurat
scrna-seq written 6 weeks ago by vchandr7 • 0
2
votes
2
answers
138
views
2
answers
Using FPKM and TPM values for batch correction for Single Cell RNA-Seq
scrna-seq batch correction fpkm tpm rna-seq written 6 weeks ago by hkarakurt • 80 • updated 6 weeks ago by shoujun.gu • 250
0
votes
0
answers
253
views
0
answers
[Seurat] Looking into differential gene expression between specific groups of two different clusters
scrna-seq R seurat written 6 weeks ago by niklas.k.bruse • 0
1
vote
0
answers
183
views
0
answers
Kallisto | bustools workflow for fastq with R1 and R2 (forward and reverse)?
scrna-seq kallisto lior pachter kallisto|bustools written 7 weeks ago by F. Golestan • 20 • updated 7 weeks ago by h.mon ♦ 28k
5
votes
3
answers
274
views
3
answers
Is feature selection necessary before dimensional reduction in single-cell analysis?
scrna-seq feature seleciton single cell written 8 weeks ago by Phoe • 20
1
vote
0
answers
203
views
0
answers
Job: Postgraduate student in Bioinformatics and Cancer Genomics
single-cell seq liver cancer job scrna-seq ngs rna-seq written 8 weeks ago by waihungh • 20
0
votes
0
answers
166
views
0
answers
Is there any particular R package for Gene Set Enrichment Analysis (GSEA) of scRNA-seq datasets?
scrna-seq gsea written 8 weeks ago by Paragon • 0
2
votes
0
answers
142
views
0
answers
scRNA-seq: Kallisto processing of bioproject data (fastq-dump)
scrna-seq bioproject fastq-dump kallisto rna-seq written 8 weeks ago by bsmith030465 • 150
1
vote
1
answer
179
views
1
answer
read a scRNA-seq matirx with Seurat
scrna-seq written 12 weeks ago by hubenxia123 • 0 • updated 9 weeks ago by danvoronov • 10
6
votes
5
answers
1.4k
views
10 follow
5
answers
single cell RNA-seq pipeline
scrna-seq written 16 months ago by Bogdan • 880 • updated 9 weeks ago by shoujun.gu • 250
2
votes
1
answer
365
views
1
answer
Single cell clutering after regressing out cell cycle effect using seurat
scrna-seq seurat clustering written 10 weeks ago by piyushjo • 170 • updated 10 weeks ago by Haci • 170
4
votes
1
answer
408
views
1
answer
Single-nucleus RNA-seq processing (10x) with Pseudoaligners (Kallisto)
scrna-seq kallisto rna-seq written 10 weeks ago by achamess • 50 • updated 10 weeks ago by Lior Pachter • 460
3
votes
1
answer
154
views
1
answer
Expression plots of some genes of interest from scRNA data for each library
scrna-seq seurat written 10 weeks ago by entropy • 30
4
votes
1
answer
245
views
1
answer
scRNA-seq analysis of two data-sets
scrna-seq seurat written 10 weeks ago by piyushjo • 170 • updated 10 weeks ago by jared.andrews07 • 3.9k
1
vote
0
answers
143
views
0
answers
How single cells are sorted in an scRNA-Seq protocol by FACS?
scrna-seq facs flow cytomertry cell sorting written 12 weeks ago by mor.chalabi • 10
<prev • 92 results • page 1 of 4 • next >
Recent Votes
Recent Locations • All »
  • Manipal School of Life Science, 4 minutes ago
  • Iran, Islamic Republic Of, 5 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1389 users visited in the last hour