Showing: snvreset
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a realiable algorithm that calls INDELS of length 50bp-300bp in cancer genomes
indel sv snv cnv written 3 months ago by Bogdan510 • updated 3 months ago by Eric T.2.2k
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Tool to identify recurrent mutations directly from VCF
vcf recurrent mutation mutation snv written 9 months ago by ATpoint4.4k • updated 5 months ago by Biostar ♦♦ 20
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Hard time trying to calculate Allele Frequency and DP from Platypus
snv rna-seq written 6 months ago by simplitia20 • updated 6 months ago by genomax49k
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Dataset preparation for driver/passenger gene discovery
gene tcga snv snp cancer written 9 months ago by mhasa00630 • updated 9 months ago by Kevin Blighe21k
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determine loss- or gain-of-function of specific mutation
mutation variant snv written 10 months ago by igor6.2k • updated 10 months ago by mforde841.1k
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Transcriptional strand bias on SNV from exome data
exome strand-bias snv written 10 months ago by Chirag Nepal2.1k • updated 10 months ago by Biostar ♦♦ 20
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Will random hexamer priming introduce SNP / SNV detection bias?
next-gen snv snp written 11 months ago by CY130 • updated 11 months ago by Pierre Lindenbaum108k
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WES or WGS analysis of cancer samples with no matched germline
wgs wes snv cnv written 11 months ago by Bogdan510 • updated 11 months ago by markus.riester260
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Defining LoF mutations with Annovar
annovar snv written 16 months ago by QVINTVS_FABIVS_MAXIMVS2.1k • updated 16 months ago by mforde841.1k
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Software to identify SNV and report mutation type
assembly sequence snv snp alignment written 20 months ago by Zar0 • updated 17 months ago by Biostar ♦♦ 20
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local de novo assembly and split-read alignment at known sites and output bams?
indel snv written 19 months ago by lyz10302012270 • updated 19 months ago by Devon Ryan81k
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TCGA Broad Institute curated variants
broad institute tcga snv rna-seq written 2.2 years ago by umn_bist310 • updated 2.1 years ago by Istvan Albert ♦♦ 77k
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Broad Institute TCGA MAF procedure
maf tcga snv rna-seq written 2.2 years ago by umn_bist310
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Allele specific reads
allele specific reads snv atac-seq written 2.2 years ago by prasoon.agarwal10 • updated 2.2 years ago by geek_y8.6k
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How to make column for the number of TCGA cases when doing SNV analysis?
gene tcga ccle snv cases written 2.5 years ago by agicict120 • updated 2.4 years ago by Biostar ♦♦ 20
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Cosmic mutation signature
cosmic mutation signature snv written 2.4 years ago by agicict120 • updated 2.4 years ago by trausch1.0k
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About Dream Challenge Somatic Mutation Calling Algorithms
dream somatic mutations snv written 2.4 years ago by morovatunc360 • updated 2.4 years ago by TriS3.4k
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Is it correct to merge TCGA mutation data from multiple centers
tcga snv written 2.4 years ago by vakul.mohanty230 • updated 2.4 years ago by Chris Miller19k
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