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<prev • 19 results • page 1 of 1 • next >
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How to perform relatedness across multiple trio cohort ?
trio relatedness vcftools written 5 weeks ago by dare_devil • 1.4k
9
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1
answer
111
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9 follow
1
answer
Calling triovariants using varscan from a compressed mileup file ?
trio varscan samtools mpileup pipe written 7 weeks ago by dare_devil • 1.4k • updated 6 weeks ago by svp • 420
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131
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6 follow
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CalculateGenotypePosteriors: A USER ERROR has occurred: Invalid argument ' '.
trio gatk calculategenotypeposteriors ped written 6 weeks ago by dare_devil • 1.4k
8
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1
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179
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7 follow
1
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Expected a file with 2 fields per line. GenomicsDBImport from GATK ?
trio gatk genomicsdbimport cohort written 7 weeks ago by dare_devil • 1.4k
2
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1
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102
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1
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How to call denovo variants from multiple trios cohort?
trio gatk denovo germline written 8 weeks ago by dare_devil • 1.4k • updated 8 weeks ago by Pierre Lindenbaum ♦ 134k
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357
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10 follow
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How to call denovo and rare variants from a trios cohort?
trio gatk gvcf denovo variants written 3 months ago by dare_devil • 1.4k • updated 3 months ago by Jeremy Leipzig ♦ 19k
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503
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Parent of Origin analysis in trio dataset
trio parent of origin vcftoos phasing premim written 20 months ago by a.zore2 • 10 • updated 19 months ago by Biostar ♦♦ 20
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350
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Genotype phasing with lack of parental information - compound heterozygous
trio genotype phasing sequencing written 20 months ago by vntt2407 • 10
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2
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808
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5 follow
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Denovo variant detection in trios using only 3 gVCF files
trio mutation denovo written 2.1 years ago by sriniparth • 10 • updated 2.1 years ago by Pierre Lindenbaum ♦ 134k
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571
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Trio SNP data to test script (preferably from Infinium Global Screening Array)
trio array microarray snp illumina written 2.2 years ago by kurt.cagri • 0
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2
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1.2k
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6 follow
2
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Paternity Testing from WGS Trio
trio wgs dna-seq paternity test written 2.5 years ago by ClkElf • 30 • updated 2.5 years ago by Ram ♦ 32k
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518
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Simulating Trio Data
trio genome simulation written 2.6 years ago by Ritu • 0 • updated 2.6 years ago by Len Trigg • 1.5k
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1
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an alternative "join" option for annotated-vcf handling in trios
trio vcf written 3.1 years ago by emmanouil.a • 30 • updated 3.1 years ago by Pierre Lindenbaum ♦ 134k
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best practices in trio snp and cnv analysis
trio gwas snp cnv omni5 written 3.2 years ago by mcdm • 0
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3
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1.2k
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3
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What kind of filtering can be applied to reduce my exonic variants?
exomeseq dnaseq trio snp variants written 3.9 years ago by bioinforesearchquestions • 280 • updated 3.2 years ago by Biostar ♦♦ 20
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does varscan2 trio mode perform joint genotyoing?
trio varscan joint genotyping variant germline written 3.3 years ago by lait • 160
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6 follow
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retrospective trio analysis from WGS SNPs
trio lineage pedigree variant snp written 3.5 years ago by harold.smith.tarheel • 4.6k • updated 3.5 years ago by andrew.j.skelton73 ♦ 6.1k
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922
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Trios from 1kG
trio next-gen sequencing written 4.9 years ago by nayshool • 20
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4.4k
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Why the CEU trio's parents NA12891 and NA12892 are not in 1000 Genomes phase 3
genome 1000 genomes trio sequencing written 5.5 years ago by flow.genet • 20
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