Showing: varscan2reset
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fpfilter - All variants fail
varscan2 fpfilter written 5 months ago by ar.satkhol180 • updated 5 months ago by ATpoint26k
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Annotating varscan2 output
annotation varscan2 written 6 months ago by ar.satkhol180 • updated 6 months ago by bernatgel2.2k
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Downstream analysis of VCF files obtained from VarScan2
vcf wes snpeff varscan2 somatic variations written 11 months ago by Raheleh110 • updated 7 months ago by bari.ballew190
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How to convert VarScan TAB format to VCF?
genome varscan2 written 3.5 years ago by SmallChess500 • updated 8 months ago by marcofraca10
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Varscan2 copynumber 'Parsing Exception' error
varscan2 copynumber samtools bam whole exome written 3.3 years ago by Vanish00710 • updated 13 months ago by jgarces10
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germline calling of tumor-normal paired sample germline by varscan2
tumor-normal varscan2 germline written 18 months ago by oghzzang40 • updated 18 months ago by ATpoint26k
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varscan not taking opstions
mpileup2snp varscan2 setting written 18 months ago by fabbri.marco0 • updated 18 months ago by Pierre Lindenbaum124k
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varscan2 somatic sip
somatic varscan2 snp written 21 months ago by fabbri.marco0
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Copynumber calculation problem
varscan2 cnv written 21 months ago by jinxinhao198860 • updated 21 months ago by Kevin Blighe51k
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Galaxy workflow queue
galaxy varscan2 written 2.4 years ago by louis.gil0070
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SomaticSniper VS Varscan2
varscan2 somaticsniper variant_calling written 2.8 years ago by user230613280 • updated 2.8 years ago by Chris Miller21k
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only chrM in the varscan2 copynumber output
copynumber varscan2 chrm written 2.9 years ago by lhaiyan330 • updated 2.9 years ago by WouterDeCoster42k
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How to summarize variant data in multiple VCF files?
vcf varscan2 summary comut visualization written 3.1 years ago by Jokhe110 • updated 3.1 years ago by Jorge Amigo11k
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about computer memory and mpileup files
varscan2 memory snp written 3.2 years ago by Bogdan880 • updated 3.1 years ago by karl.stamm3.5k
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Visualize VarScan2 Copy Number Aberrations in IGV
alignment sequence varscan2 tool igv written 3.6 years ago by plumgwodehouse0 • updated 3.6 years ago by genomax74k
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Varscan2 warning : resetting normal
alignment varscan2 written 4.4 years ago by bharata1803430 • updated 4.4 years ago by russhh4.8k
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Is there any falsepositive filter script for INDELS like the fpfilter.pl?
indels sequence varscan2 snp written 4.7 years ago by ivivek_ngs4.8k • updated 4.6 years ago by Biostar ♦♦ 20
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