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Forum: Popularity of workflow systems
workflow forum nextflow snakemake written 9 weeks ago by WouterDeCoster ♦ 36k
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152
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PubSub or workflows or both?
pubsub python workflow events written 11 weeks ago by syntax • 30
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1.9k
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38 follow
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Tutorial: Creating workflows with snakemake and conda
conda workflow tutorial snakemake written 5 months ago by finswimmer ♦ 9.9k • updated 11 weeks ago by syntax • 30
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7.0k
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16 follow
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Tool: Snakemake--Python-Based Workflow Management
python workflow tool written 5.2 years ago by Sean Davis ♦ 25k • updated 3 months ago by carlopecoraro2 • 840
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1
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308
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Forum: I'm currently in my second year of my phd, I'm intrested to develop somthing for galaxy server
workflow galaxy forum written 4 months ago by dego999 • 0 • updated 4 months ago by Medhat ♦ 8.1k
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Different results with manual MACS tool vs. workflow automated MACS tool for ChIP analysis
macs lambda workflow chip-seq forum written 4.2 years ago by christopher.paran • 0 • updated 4 months ago by zx8754 ♦ 6.5k
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1.5k
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1
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Anyone Using Jboss Drools ?
workflow written 8.6 years ago by Pierre Lindenbaum ♦ 116k • updated 5 months ago by RamRS ♦ 20k
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250
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CWL Error Empty Scatter
cwl workflow pipeline scatter written 5 months ago by HL • 0
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1
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331
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1
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Grail: reflow on AWS vs others (snakemake/cfncluster, etc)
aws workflow snakemake reflow cfncluster written 6 months ago by isaacyho • 0 • updated 6 months ago by btsui • 290
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329
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Recent metatranscriptomics workflow
metatranscriptomics workflow kallisto written 7 months ago by dark.lord • 0
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1
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3.1k
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1
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Gatk Pipeline: Markduplicates At The End ?
workflow next-gen pipeline gatk markduplicates duplicates bam written 6.3 years ago by Pierre Lindenbaum ♦ 116k • updated 16 months ago by Biostar ♦♦ 20
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4
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6.5k
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9 follow
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Free Alternatives To Pipeline Pilot
workflow open pipeline written 8.2 years ago by Flow • 1.5k • updated 18 months ago by Biostar ♦♦ 20
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2.3k
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Pegasus Vs Taverna
workflow written 6.9 years ago by Jeremy Leipzig ♦ 18k • updated 20 months ago by Biostar ♦♦ 20
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1
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581
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1
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Filter by multiple columns above count threshold in R
workflow rna-seq written 22 months ago by datascientist28 • 360 • updated 22 months ago by Michael Dondrup ♦ 45k
104
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10
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14k
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30 follow
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Why Should I Use Galaxy ?
workflow galaxy written 6.6 years ago by Pierre Lindenbaum ♦ 116k
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CWL: How to parse output of steps in workflow
workflow cwl written 22 months ago by jeltje.van.baren • 80
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2
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10 follow
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Tips to build a protein network
network workflow proteomic written 23 months ago by benoahb • 40 • updated 22 months ago by YaGalbi • 1.4k
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527
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From GEO Illumina array to annotated expression table
geo annotation workflow gene expression written 23 months ago by jiab • 20
91
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7
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47 follow
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Workflow management software for pipeline development in NGS
workflow pipeline workflows pipe written 4.3 years ago by michaelberinski • 280 • updated 2.0 years ago by egafni • 30
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631
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Query processing Illumina Expression Microarray
workflow microarray llumina written 2.1 years ago by macmath • 130
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1
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889
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1
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Metagenomic shotgun sequence analysis- optimal approach
metagenomics workflow shotgun written 2.2 years ago by deni.ribicic • 0 • updated 2.2 years ago by dago • 2.5k
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756
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Join, Subtract and Group: Compare using dataset lists
dataset list workflow compare written 2.5 years ago by khaynes • 40 • updated 2.5 years ago by geek_y ♦ 9.1k
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4
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2.6k
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7 follow
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Suggest Pirna Ngs Small Rna Analysis Pipelines/Workflows
workflow written 5.3 years ago by Rm ♦ 7.8k • updated 2.7 years ago by opplatek • 30
15
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9
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2.7k
views
13 follow
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Front End, Workflow, Or Web Interface For Bioconductor
bioconductor workflow written 7.7 years ago by Jack Pincus • 50 • updated 2.9 years ago by Celton McGrath • 0
4
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1
answer
829
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1
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Can anyone suggest some good research papers to understand the complete NGS workflow?
ngs pipeline workflow written 3.0 years ago by biokoala ♦ 3.6k • updated 3.0 years ago by mbio.kyle • 300
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1.3k
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1
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Tool: NextflowWorkbench: An integrated development environment for workflows
lwt tools workflow nextflow workbench written 3.4 years ago by fac2003 • 170 • updated 3.4 years ago by Istvan Albert ♦♦ 79k
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Job: Scientific Programmer - Ensembl Hive (Hinxton, UK)
ensembl workflow ehive job pipeline written 3.9 years ago by Matthieu - Ensembl Compara • 100 • updated 3.9 years ago by elfy.ua • 0
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Python workflow/pipeline repository?
python workflow pipeline repository written 4.6 years ago by racuna • 20 • updated 4.6 years ago by Sean Davis ♦ 25k
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3
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3.8k
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3
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Best Workflow For Differential Expression Analysis Using De Novo Transcriptomes And Illumina Reads In 2014
differential-expression workflow alignment written 4.9 years ago by Birdman • 20 • updated 4.9 years ago by seidel ♦ 6.7k
1
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Is It Possible To Manually Reorder Steps In A Galaxy Workflow Summary?
workflow galaxy written 5.9 years ago by Ian ♦ 5.3k • updated 5.1 years ago by Biostar ♦♦ 20
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