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Suggestion for workflow to predict pathogenicity of SNV and INDELs
python svm pathogenicity workflow machine learning written 17 days ago by luffy • 0
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84
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Galaxy workflow concatenate
workflow galaxy multiqc fastqc written 27 days ago by avelarbio46 • 0
42
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5
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4.9k
views
11 follow
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Makefile-Driven Workflows And Bioconductor Objects
R bioconductor pipeline workflow file written 7.7 years ago by gbayon • 160 • updated 5 months ago by Biostar ♦♦ 20
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150
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How to set AWS_BATCH_JOB_ATTEMPT value when using curl to submit cromwell jobs to batch?
aws-batch workflow wdl cromwell written 5 months ago by alexandriapinto1 • 0
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1
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185
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1
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How do you get input files to a cromwell server
workflow cromwell widdle wdl written 5 months ago by Irsan • 7.2k • updated 5 months ago by vdauwera • 970
6
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2
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258
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5 follow
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Snakemake flow variantion
python workflow snakemake automatization written 6 months ago by effidotpy • 10 • updated 6 months ago by russhh ♦ 5.5k
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1
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1.3k
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1
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Snakemake wildcards: Not all output, log and benchmark files of rule sortBAM_bbb contain the same wildcards.
wildcards workflow sortbam snakemake rna-seq written 9 months ago by whelenakanya • 0 • updated 9 months ago by ale_abd • 30
2
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162
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News: 2-day Nextflow training course in Berlin
workflow news nextflow written 9 months ago by carlopecoraro2 • 1.8k
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270
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0
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Small demo bioinformatics workflows which don't require reference data?
bioinformatics workflow pipeline written 13 months ago by steve • 2.6k • updated 12 months ago by Biostar ♦♦ 20
3
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370
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0
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News: Nextflow Training Course
workflow pipeline news nextflow written 12 months ago by carlopecoraro2 • 1.8k • updated 12 months ago by ATpoint ♦ 40k
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1
answer
384
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1
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CWL: Does cwltool support to download both input file and its secondaryFiles remotely?
workflow cwl written 13 months ago by Linda • 0 • updated 13 months ago by Michael R. Crusoe • 1.8k
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2
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2.7k
views
10 follow
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Tips to build a protein network
network workflow proteomic written 3.6 years ago by benoahb • 40 • updated 14 months ago by Biostar ♦♦ 20
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2
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2.6k
views
2
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Pegasus Vs Taverna
workflow written 8.6 years ago by Jeremy Leipzig ♦ 19k • updated 14 months ago by Biostar ♦♦ 20
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1
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11k
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60 follow
1
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Tutorial: Creating workflows with snakemake and conda
conda workflow tutorial snakemake written 2.2 years ago by finswimmer ♦ 14k
7
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1
answer
414
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1
answer
Perform one basecommand fot multiple files and get output for each file in CWL
cwl workflow pipeline written 16 months ago by mariafirulevabio • 40 • updated 16 months ago by Tom • 530
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1
answer
684
views
1
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CWL join two dimensional file array output
workflow cwl scatter written 17 months ago by silverspanch • 20 • updated 17 months ago by Tom • 530
4
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1
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476
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1
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ExpressionTool failing after a scatter: How do I debug the Javascript?
workflow cwl javascript expressiontool written 19 months ago by alanh • 80
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756
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Forum: Popularity of workflow systems
workflow forum nextflow snakemake written 23 months ago by WouterDeCoster ♦ 44k
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469
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0
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PubSub or workflows or both?
pubsub python workflow events written 23 months ago by syntax • 60
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8.4k
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18 follow
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Tool: Snakemake--Python-Based Workflow Management
python workflow tool written 6.9 years ago by Sean Davis ♦ 26k • updated 24 months ago by carlopecoraro2 • 1.8k
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1
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Forum: I'm currently in my second year of my phd, I'm intrested to develop somthing for galaxy server
workflow galaxy forum written 2.1 years ago by dego999 • 0 • updated 2.1 years ago by Medhat ♦ 8.8k
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2.8k
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1
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Different results with manual MACS tool vs. workflow automated MACS tool for ChIP analysis
macs lambda workflow chip-seq forum written 5.9 years ago by christopher.paran • 0 • updated 2.1 years ago by zx8754 ♦ 9.7k
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1
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1.8k
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1
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Anyone Using Jboss Drools ?
workflow written 10.3 years ago by Pierre Lindenbaum ♦ 131k • updated 2.1 years ago by RamRS ♦ 30k
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649
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CWL Error Empty Scatter
cwl workflow pipeline scatter written 2.2 years ago by HL • 0
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1
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971
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1
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Grail: reflow on AWS vs others (snakemake/cfncluster, etc)
aws workflow snakemake reflow cfncluster written 2.2 years ago by isaacyho • 0 • updated 2.2 years ago by btsui • 290
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931
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Recent metatranscriptomics workflow
metatranscriptomics workflow kallisto written 2.3 years ago by dark.lord • 30
5
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1
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3.7k
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1
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Gatk Pipeline: Markduplicates At The End ?
workflow next-gen pipeline gatk markduplicates duplicates bam written 8.0 years ago by Pierre Lindenbaum ♦ 131k • updated 3.0 years ago by Biostar ♦♦ 20
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4
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7.5k
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9 follow
4
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Free Alternatives To Pipeline Pilot
workflow open pipeline written 9.9 years ago by Flow • 1.5k • updated 3.2 years ago by Biostar ♦♦ 20
3
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1
answer
1.2k
views
1
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Filter by multiple columns above count threshold in R
workflow rna-seq written 3.5 years ago by datascientist28 • 470 • updated 3.5 years ago by Michael Dondrup ♦ 47k
104
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10
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16k
views
30 follow
10
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Why Should I Use Galaxy ?
workflow galaxy written 8.3 years ago by Pierre Lindenbaum ♦ 131k
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