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comments
0
votes
0
replies
169
views
Your suggestion how to annotate cell type from visium data
spatial-transcriptomics
6 weeks ago by
Chris
▴ 340
0
votes
0
replies
3.7k
views
Comment:
Comment: Clustering in single cell
7 weeks ago by
Chris
▴ 340
0
votes
0
replies
647
views
Comment:
Comment: Help with subset seurat object by a column in metadata
9 weeks ago by
Chris
▴ 340
0
votes
0
replies
647
views
Comment:
Comment: Help with subset seurat object by a column in metadata
10 weeks ago by
Chris
▴ 340
1
vote
4
replies
647
views
Help with subset seurat object by a column in metadata
seurat
9 weeks ago by
Chris
▴ 340
0
votes
0
replies
250
views
Gene-pathway network with FDR or p value
clusterprofiler
4 months ago by
Chris
▴ 340
1
vote
0
replies
868
views
Comment:
Comment: Can't increase font size for x axis
5 months ago by
Chris
▴ 340
1
vote
2
replies
868
views
Comment:
Comment: Can't increase font size for x axis
5 months ago by
Chris
▴ 340
0
votes
0
replies
868
views
Comment:
Comment: Can't increase font size for x axis
5 months ago by
Chris
▴ 340
0
votes
1
reply
868
views
Comment:
Comment: Can't increase font size for x axi
5 months ago by
Chris
▴ 340
0
votes
1
reply
868
views
Comment:
Comment: Can't increase font size for x axi
5 months ago by
Chris
▴ 340
11
votes
11
replies
868
views
Can't increase font size for x axis
R
ggplot2
5 months ago by
Chris
▴ 340
0
votes
0
replies
429
views
Comment:
Comment: Help with cnet plot for customize pathway from MSigDb
5 months ago by
Chris
▴ 340
0
votes
2
replies
429
views
Help with cnet plot for customize pathway from MSigDb
cnet
5 months ago by
Chris
▴ 340
1
vote
1
reply
804
views
Comment:
Comment: Help with running egsea()
7 months ago by
Chris
▴ 340
1
vote
1
reply
804
views
Comment:
Comment: Help with running egsea()
7 months ago by
Chris
▴ 340
5
votes
5
replies
804
views
Error in dimnames(x) <- dn : length of 'dimnames' [2] not equal to array extent
EGSEA
7 months ago by
Chris
▴ 340
0
votes
0
replies
268
views
Empty table plot using plotGseaTable()
FGSEA
7 months ago by
Chris
▴ 340
0
votes
0
replies
250
views
Filter low express genes in microarray data
microarray
7 months ago by
Chris
▴ 340
1
vote
1
reply
603
views
Difference when using difference number of pathways score to compare between 3 groups
GSVA
Limma
updated 7 months ago by
Gordon Smyth
★ 7.7k • written 8 months ago by
Chris
▴ 340
0
votes
0
replies
240
views
How to annotate pairwise p value from limma (3 groups) in a combine multiple boxplot?
limma
boxplot
8 months ago by
Chris
▴ 340
0
votes
1
reply
571
views
Comment:
Comment: Visualize pathways from MSigDB
8 months ago by
Chris
▴ 340
3
votes
3
replies
571
views
Visualize pathways from MSigDB
MSigdb
8 months ago by
Chris
▴ 340
0
votes
0
replies
215
views
How to check if a few pathways have relationship?
MSigdb
REACTOME
KEGG
8 months ago by
Chris
▴ 340
0
votes
0
replies
602
views
Comment:
Comment: Limma compare between 3 conditions vs 2 conditions
8 months ago by
Chris
▴ 340
0
votes
0
replies
218
views
Number of pathway result from GSVA
GSVA
8 months ago by
Chris
▴ 340
1
vote
3
replies
602
views
Limma compare between 3 conditions vs 2 conditions
Limma
updated 8 months ago by
Gordon Smyth
★ 7.7k • written 8 months ago by
Chris
▴ 340
1
vote
1
reply
738
views
Help with SCENIC+
scenic-plus
updated 8 months ago by
corbettberry
▴ 10 • written 13 months ago by
Chris
▴ 340
0
votes
0
replies
807
views
Comment:
Comment: Differential express genes in imbalance groups
8 months ago by
Chris
▴ 340
0
votes
0
replies
807
views
Comment:
Comment: Differential express genes in imbalance groups
9 months ago by
Chris
▴ 340
4
votes
5
replies
807
views
Differential express genes in imbalance groups
Limma
8 months ago by
Chris
▴ 340
0
votes
0
replies
409
views
Comment:
Comment: Upset plot
9 months ago by
Chris
▴ 340
1
vote
2
replies
409
views
Upset plot
upsetplot
9 months ago by
Chris
▴ 340
0
votes
0
replies
416
views
Comment:
Comment: How to get genes in a gene set in msigdb?
9 months ago by
Chris
▴ 340
0
votes
2
replies
416
views
How to get genes in a gene set in msigdb?
msigdb
8 months ago by
Chris
▴ 340
0
votes
0
replies
239
views
Function normalize raw microarray data for GSVA
gsva
9 months ago by
Chris
▴ 340
0
votes
0
replies
532
views
Error in validObject(.Object) : invalid class “ExpressionSet” object: sampleNames differ between assayData and phenoData
GSVA
9 months ago by
Chris
▴ 340
0
votes
1
reply
662
views
Comment:
Comment: Differential expression at pathway level
9 months ago by
Chris
▴ 340
1
vote
0
replies
662
views
Comment:
Comment: Differential expression at pathway level
10 months ago by
Chris
▴ 340
5
votes
4
replies
662
views
Differential expression at pathway level
GSVA
updated 9 months ago by
AquaDeath
▴ 80 • written 10 months ago by
Chris
▴ 340
0
votes
1
reply
1.2k
views
Comment:
Comment: Remove X in row name with only number
10 months ago by
Chris
▴ 340
0
votes
1
reply
1.2k
views
Comment:
Comment: Remove X in row name with only number
10 months ago by
Chris
▴ 340
0
votes
1
reply
1.2k
views
Comment:
Comment: Remove X in row name with only number
10 months ago by
Chris
▴ 340
7
votes
12
replies
2.5k
views
Integrated genes from bulk RNA seq and ATAC seq
ATAC-seq
bulk-RNA
updated 10 months ago by
Ram
44k • written 19 months ago by
Chris
▴ 340
0
votes
1
reply
1.2k
views
Comment:
Comment: Remove X in row name with only number
10 months ago by
Chris
▴ 340
0
votes
1
reply
1.2k
views
Comment:
Comment: Remove X in row name with only number
10 months ago by
Chris
▴ 340
4
votes
11
replies
1.2k
views
Remove X in row name with only number
GSVA
updated 10 months ago by
Ram
44k • written 10 months ago by
Chris
▴ 340
0
votes
1
reply
2.0k
views
Comment:
Comment: Help with gatk BaseRecalibrator
12 months ago by
Chris
▴ 340
0
votes
1
reply
2.0k
views
Comment:
Comment: Help with gatk BaseRecalibrator
12 months ago by
Chris
▴ 340
0
votes
1
reply
2.0k
views
Comment:
Comment: Help with gatk BaseRecalibrator
12 months ago by
Chris
▴ 340
511 results • Page
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