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Showing :
questions
8
votes
22
replies
14k
views
Creating reference Index using Bowtie2
genome
alignment
next-gen
Assembly
updated 2.5 years ago by
Ram
43k • written 9.9 years ago by
cvu
▴ 180
1
vote
3
replies
13k
views
bowtie2-align died with signal 11 (SEGV) (core dumped)
bowtie2
updated 5.2 years ago by
sushuaikun
▴ 10 • written 7.5 years ago by
cvu
▴ 180
0
votes
1
reply
1.3k
views
Remove Sequences from existing Bowtie2 index
bowtie2
index
ngs
genome
5.6 years ago by
cvu
▴ 180
26
votes
13
replies
29k
views
8 follow
Bowtie2 parameters for best alignment
alignment
Assembly
genome
SNP
updated 14 months ago by
Medhat
9.7k • written 9.9 years ago by
cvu
▴ 180
0
votes
1
reply
2.0k
views
RAD-seq Downstream analysis
rad-seq
ipyrad
downstream
updated 6.2 years ago by
pbpearman
• 0 • written 6.9 years ago by
cvu
▴ 180
0
votes
0
replies
1.8k
views
RRBS: import Bismark output to RnBeads
bismark
bsseq
sequencing
bisulfite
methylation
updated 6.3 years ago by
Biostar
20 • written 6.4 years ago by
cvu
▴ 180
0
votes
1
reply
1.3k
views
bsseq fisherTest result
sequencing
methylation
bsseq
bisulfite
6.4 years ago by
cvu
▴ 180
0
votes
6
replies
1.9k
views
standalone BLAST parametes
genome
gene
blast
updated 6.7 years ago by
Matteo Schiavinato
★ 3.6k • written 6.7 years ago by
cvu
▴ 180
3
votes
2
replies
2.5k
views
Predict Prion like Proteins (PLAAC)
gene
Prion
Protein
updated 6.8 years ago by
Biostar
20 • written 6.8 years ago by
cvu
▴ 180
1
vote
1
reply
1.8k
views
Intronic Variant Filtering
variant-calling
snp
updated 7 weeks ago by
Ram
43k • written 6.8 years ago by
cvu
▴ 180
3
votes
3
replies
2.9k
views
joining paired end illumina data for metagenomic analysis
metagenome
16s
QIIME
paired end
illumina
7.0 years ago by
cvu
▴ 180
4
votes
5
replies
3.0k
views
htseq read count zero ?
RNA-Seq
htseq
trinity
updated 7.0 years ago by
Carlo Yague
8.7k • written 7.0 years ago by
cvu
▴ 180
1
vote
1
reply
1.4k
views
Metagenome Next Generation Sequencing
metagenome
metatranscriptome
genome
sequencing
7.4 years ago by
cvu
▴ 180
1
vote
2
replies
3.3k
views
how to map greengene ids to ncbi taxon ids ?
NGS
sequencing
qiime
metagenomics
genome
updated 22 months ago by
Ram
43k • written 8.2 years ago by
cvu
▴ 180
2
votes
2
replies
3.2k
views
Samtools mpileup refrence fasta file input
alignment
SNP
Assembly
next-gen
updated 8.4 years ago by
Biostar
20 • written 9.9 years ago by
cvu
▴ 180
0
votes
1
reply
4.3k
views
NameError: global name 'xticks' is not defined in graphlan_lib.py while running GraPhlAn
GraPhlAn
Python
metagenomics
taxonomy
updated 20 months ago by
Ram
43k • written 8.7 years ago by
cvu
▴ 180
5
votes
3
replies
1.9k
views
GATK creating hs_err_pid.log file
SNP
next-gen-sequencing
updated 16 months ago by
Ram
43k • written 9.0 years ago by
cvu
▴ 180
3
votes
5
replies
4.1k
views
VariantRecalibrator Error message
genome
alignment
snp
Assembly
next-gen
updated 2.3 years ago by
Ram
43k • written 9.9 years ago by
cvu
▴ 180
16
votes
11
replies
13k
views
Perl script running slow with big files
perl
SNP
snp
alignment
Assembly
updated 2.5 years ago by
Ram
43k • written 9.8 years ago by
cvu
▴ 180
1
vote
0
replies
3.1k
views
VCF quality filtering
genome
alignment
SNP
Assembly
updated 2.5 years ago by
Ram
43k • written 9.9 years ago by
cvu
▴ 180
1
vote
1
reply
2.3k
views
Which Reference Index to use for Clinical Variants (SNPs and INDELs) Detection ?
Assembly
SNP
next-gen
alignment
genome
updated 9.9 years ago by
vlaufer
▴ 290 • written 9.9 years ago by
cvu
▴ 180
6
votes
6
replies
6.4k
views
Comparing vcf with dbSNP
snp
alignment
Assembly
next-gen
updated 9.9 years ago by
cristianrohr768
▴ 30 • written 9.9 years ago by
cvu
▴ 180
1
vote
1
reply
3.5k
views
VariantAnnotator GATK Error
sequence
snp
Assembly
alignment
updated 2.6 years ago by
Ram
43k • written 9.9 years ago by
cvu
▴ 180
4
votes
9
replies
5.5k
views
INFO interpretation in VCF File
alignment
Assembly
SNP
next-gen
updated 15 months ago by
Ram
43k • written 9.9 years ago by
cvu
▴ 180
24 results • Page
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