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7
votes
0
replies
4.4k
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Comment: C: Upgrade Ubuntu 16.04 to Bio Linux 8
8.5 years ago by fhsantanna ▴ 620
0
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0
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3.5k
views
Answer: A: How to remove contigs below 201 nuclotide from a genome assembly?
8.6 years ago by fhsantanna ▴ 620
0
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1
reply
6.0k
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Answer: A: All vs. all pairwise sequence aligment
8.6 years ago by fhsantanna ▴ 620
0
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0
replies
1.8k
views
Answer: A: Functional interpretation of a bacterial transcriptome
8.6 years ago by fhsantanna ▴ 620
0
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1
reply
1.8k
views
Functional interpretation of a bacterial transcriptome
transcriptomics bacteria functional annotation
8.6 years ago by fhsantanna ▴ 620
6
votes
8
replies
3.6k
views
Metrics to evaluate tree congruence
phylogeny congruence software
updated 8.7 years ago by ★ 3.0k • written 8.7 years ago by ▴ 620
0
votes
0
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7.6k
views
Comment: C: Compute a identity matrix from an alignment - command line approach for batch pr
8.7 years ago by fhsantanna ▴ 620
0
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1
reply
7.6k
views
Comment: C: Compute a identity matrix from an alignment - command line approach for batch pr
8.7 years ago by fhsantanna ▴ 620
0
votes
0
replies
3.6k
views
Comment: C: Metrics to evaluate tree congruence
8.7 years ago by fhsantanna ▴ 620
0
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1
reply
3.6k
views
Comment: C: Metrics to evaluate tree congruence
8.7 years ago by fhsantanna ▴ 620
0
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0
replies
3.6k
views
Comment: C: Metrics to evaluate tree congruence
8.7 years ago by fhsantanna ▴ 620
1
vote
5
replies
4.3k
views
De novo genome assembly using Ion Proton data: which assembler do you recommend?
ion-proton Assembly iontorrent
updated 3.4 years ago by 45k • written 10.5 years ago by ▴ 620
2
votes
2
replies
3.0k
views
Reapr perfectmap issue
verification perfectmap reapr
updated 3.5 years ago by 45k • written 10.8 years ago by ▴ 620
1
vote
0
replies
9.3k
views
Comment: C: Bash loop using Edirect (esearch|efetch)
8.9 years ago by fhsantanna ▴ 620
0
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1
reply
9.3k
views
Comment: C: Bash loop using Edirect (esearch|efetch)
8.9 years ago by fhsantanna ▴ 620
2
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1
reply
9.3k
views
Comment: C: Bash loop using Edirect (esearch|efetch)
8.9 years ago by fhsantanna ▴ 620
0
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1
reply
9.3k
views
Comment: C: Bash loop using Edirect (esearch|efetch)
8.9 years ago by fhsantanna ▴ 620
0
votes
2
replies
2.2k
views
Metagenomic Iontorrent reads: filtering and denoising
metagenome reads filtering denoise
updated 8.9 years ago by ★ 2.4k • written 9.0 years ago by ▴ 620
0
votes
1
reply
4.1k
views
Comment: C: Blast in metagenomics: should I download all NR database for this purpose?
9.0 years ago by fhsantanna ▴ 620
0
votes
1
reply
4.1k
views
Comment: C: Blast in metagenomics: should I download all NR database for this purpose?
9.0 years ago by fhsantanna ▴ 620
0
votes
0
replies
4.1k
views
Comment: C: DOOR2 (operon predictor) does not load my fna file, do you know an alternative s
9.3 years ago by fhsantanna ▴ 620
0
votes
0
replies
4.1k
views
Comment: C: DOOR2 (operon predictor) does not load my fna file, do you know an alternative s
9.3 years ago by fhsantanna ▴ 620
0
votes
1
reply
4.1k
views
Comment: C: DOOR2 (operon predictor) does not load my fna file, do you know an alternative s
9.3 years ago by fhsantanna ▴ 620
0
votes
1
reply
4.1k
views
Comment: C: DOOR2 (operon predictor) does not load my fna file, do you know an alternative s
9.3 years ago by fhsantanna ▴ 620
0
votes
1
reply
4.1k
views
Comment: C: DOOR2 (operon predictor) does not load my fna file, do you know an alternative s
9.3 years ago by fhsantanna ▴ 620
0
votes
0
replies
4.1k
views
Comment: C: DOOR2 (operon predictor) does not load my fna file, do you know an alternative s
9.3 years ago by fhsantanna ▴ 620
2
votes
13
replies
4.1k
views
DOOR2 (operon predictor) does not load my fna file, do you know an alternative software?
door2
9.3 years ago by fhsantanna ▴ 620
3
votes
5
replies
3.8k
views
How do I compile Quake (error correction of Miseq reads) in Ubuntu?
ubuntu quake error_correction compile
updated 3.6 years ago by 45k • written 10.8 years ago by ▴ 620
0
votes
0
replies
4.5k
views
Comment: C: All reads with mapq value <= 1, htseq does not attribute counts to any feature
9.5 years ago by fhsantanna ▴ 620
0
votes
0
replies
4.5k
views
Comment: C: All reads with mapq value <= 1, htseq does not attribute counts to any feature
9.5 years ago by fhsantanna ▴ 620
0
votes
2
replies
4.5k
views
Answer: A: All reads with mapq value <= 1, htseq does not attribute counts to any feature
9.5 years ago by fhsantanna ▴ 620
0
votes
0
replies
4.5k
views
Comment: C: All reads with mapq value <= 1, htseq does not attribute counts to any feature
9.5 years ago by fhsantanna ▴ 620
5
votes
11
replies
4.5k
views
All reads with mapq value <= 1, htseq does not attribute counts to any feature
rnaseq mapq
9.5 years ago by fhsantanna ▴ 620
0
votes
1
reply
4.5k
views
Comment: C: All reads with mapq value <= 1, htseq does not attribute counts to any feature
9.5 years ago by fhsantanna ▴ 620
9
votes
2
replies
2.7k
views
Incompatibility between bbmap and htseq?
bbmap htseq
updated 9.5 years ago by 153k • written 9.5 years ago by ▴ 620
0
votes
0
replies
3.8k
views
Comment: C: gbk2faa: why is it not working for refseq gbk?
9.7 years ago by fhsantanna ▴ 620
1
vote
0
replies
3.8k
views
Comment: C: gbk2faa: why is it not working for refseq gbk?
9.7 years ago by fhsantanna ▴ 620
3
votes
5
replies
3.8k
views
gbk2faa: why is it not working for refseq gbk?
biopython
updated 3.2 years ago by 45k • written 9.7 years ago by ▴ 620
1
vote
3
replies
2.7k
views
Reduce redundancy of alignment based on taxonomy and identity
CD-HIT alignment redundancy
9.7 years ago by fhsantanna ▴ 620
0
votes
0
replies
4.3k
views
Comment: C: De novo genome assembly using Ion Proton data: which assembler do you recommend?
10.0 years ago by fhsantanna ▴ 620
0
votes
1
reply
1.9k
views
Comment: C: Why some genomes are not available in genbank ftp?
10.3 years ago by fhsantanna ▴ 620
2
votes
3
replies
1.9k
views
Why some genomes are not available in genbank ftp?
genbank ftp
updated 10.3 years ago by 35k • written 10.3 years ago by ▴ 620
0
votes
1
reply
1.8k
views
Strategies to pare down alignment data
redundancy alignment phylogeny
updated 2.7 years ago by 45k • written 10.3 years ago by ▴ 620
0
votes
0
replies
10k
views
Comment: C: ANI calculation: alternatives to Jspecies
10.3 years ago by fhsantanna ▴ 620
0
votes
1
reply
10k
views
Comment: C: ANI calculation: alternatives to Jspecies
10.4 years ago by fhsantanna ▴ 620
0
votes
1
reply
10k
views
Comment: C: ANI calculation: alternatives to Jspecies
10.4 years ago by fhsantanna ▴ 620
0
votes
1
reply
21k
views
Comment: Comment: Extract fasta sequences from a large file using a list of names
updated 2.6 years ago by 45k • written 10.4 years ago by ▴ 620
0
votes
1
reply
21k
views
Comment: Comment: Extract fasta sequences from a large file using a list of names
updated 2.6 years ago by 45k • written 10.4 years ago by ▴ 620
0
votes
0
replies
21k
views
Comment: Comment: Extract fasta sequences from a large file using a list of names
updated 2.6 years ago by 45k • written 10.4 years ago by ▴ 620
0
votes
1
reply
21k
views
Comment: C: Extract fasta sequences from a large file using a list of names
10.4 years ago by fhsantanna ▴ 620
161 results • Page 2 of 4
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