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7
votes
0
replies
3.9k
views
Comment: C: Upgrade Ubuntu 16.04 to Bio Linux 8
7.1 years ago by fhsantanna ▴ 610
0
votes
0
replies
3.0k
views
Answer: A: How to remove contigs below 201 nuclotide from a genome assembly?
7.2 years ago by fhsantanna ▴ 610
0
votes
1
reply
4.8k
views
Answer: A: All vs. all pairwise sequence aligment
7.2 years ago by fhsantanna ▴ 610
0
votes
1
reply
1.6k
views
Functional interpretation of a bacterial transcriptome
transcriptomics bacteria functional annotation
7.2 years ago by fhsantanna ▴ 610
0
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0
replies
1.6k
views
Answer: A: Functional interpretation of a bacterial transcriptome
7.2 years ago by fhsantanna ▴ 610
6
votes
8
replies
2.6k
views
Metrics to evaluate tree congruence
phylogeny congruence software
updated 7.3 years ago by ★ 3.0k • written 7.3 years ago by ▴ 610
0
votes
0
replies
6.4k
views
Comment: C: Compute a identity matrix from an alignment - command line approach for batch pr
7.3 years ago by fhsantanna ▴ 610
0
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1
reply
6.4k
views
Comment: C: Compute a identity matrix from an alignment - command line approach for batch pr
7.3 years ago by fhsantanna ▴ 610
0
votes
0
replies
2.6k
views
Comment: C: Metrics to evaluate tree congruence
7.3 years ago by fhsantanna ▴ 610
0
votes
1
reply
2.6k
views
Comment: C: Metrics to evaluate tree congruence
7.3 years ago by fhsantanna ▴ 610
0
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0
replies
2.6k
views
Comment: C: Metrics to evaluate tree congruence
7.3 years ago by fhsantanna ▴ 610
1
vote
5
replies
3.7k
views
De novo genome assembly using Ion Proton data: which assembler do you recommend?
ion-proton Assembly iontorrent
updated 24 months ago by 43k • written 9.2 years ago by ▴ 610
2
votes
2
replies
2.6k
views
Reapr perfectmap issue
verification perfectmap reapr
updated 2.2 years ago by 43k • written 9.4 years ago by ▴ 610
1
vote
0
replies
7.8k
views
Comment: C: Bash loop using Edirect (esearch|efetch)
7.5 years ago by fhsantanna ▴ 610
0
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1
reply
7.8k
views
Comment: C: Bash loop using Edirect (esearch|efetch)
7.5 years ago by fhsantanna ▴ 610
2
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1
reply
7.8k
views
Comment: C: Bash loop using Edirect (esearch|efetch)
7.5 years ago by fhsantanna ▴ 610
0
votes
1
reply
7.8k
views
Comment: C: Bash loop using Edirect (esearch|efetch)
7.5 years ago by fhsantanna ▴ 610
0
votes
2
replies
1.9k
views
Metagenomic Iontorrent reads: filtering and denoising
metagenome reads filtering denoise
updated 7.6 years ago by ★ 2.4k • written 7.6 years ago by ▴ 610
0
votes
1
reply
3.3k
views
Comment: C: Blast in metagenomics: should I download all NR database for this purpose?
7.6 years ago by fhsantanna ▴ 610
0
votes
1
reply
3.3k
views
Comment: C: Blast in metagenomics: should I download all NR database for this purpose?
7.6 years ago by fhsantanna ▴ 610
0
votes
0
replies
3.1k
views
Comment: C: DOOR2 (operon predictor) does not load my fna file, do you know an alternative s
7.9 years ago by fhsantanna ▴ 610
0
votes
0
replies
3.1k
views
Comment: C: DOOR2 (operon predictor) does not load my fna file, do you know an alternative s
7.9 years ago by fhsantanna ▴ 610
0
votes
1
reply
3.1k
views
Comment: C: DOOR2 (operon predictor) does not load my fna file, do you know an alternative s
7.9 years ago by fhsantanna ▴ 610
0
votes
1
reply
3.1k
views
Comment: C: DOOR2 (operon predictor) does not load my fna file, do you know an alternative s
7.9 years ago by fhsantanna ▴ 610
0
votes
1
reply
3.1k
views
Comment: C: DOOR2 (operon predictor) does not load my fna file, do you know an alternative s
7.9 years ago by fhsantanna ▴ 610
0
votes
0
replies
3.1k
views
Comment: C: DOOR2 (operon predictor) does not load my fna file, do you know an alternative s
7.9 years ago by fhsantanna ▴ 610
2
votes
13
replies
3.1k
views
DOOR2 (operon predictor) does not load my fna file, do you know an alternative software?
door2
7.9 years ago by fhsantanna ▴ 610
3
votes
5
replies
3.2k
views
How do I compile Quake (error correction of Miseq reads) in Ubuntu?
ubuntu quake error_correction compile
updated 2.2 years ago by 43k • written 9.4 years ago by ▴ 610
0
votes
0
replies
3.5k
views
Comment: C: All reads with mapq value <= 1, htseq does not attribute counts to any feature
8.1 years ago by fhsantanna ▴ 610
0
votes
0
replies
3.5k
views
Comment: C: All reads with mapq value <= 1, htseq does not attribute counts to any feature
8.1 years ago by fhsantanna ▴ 610
0
votes
2
replies
3.5k
views
Answer: A: All reads with mapq value <= 1, htseq does not attribute counts to any feature
8.1 years ago by fhsantanna ▴ 610
0
votes
0
replies
3.5k
views
Comment: C: All reads with mapq value <= 1, htseq does not attribute counts to any feature
8.1 years ago by fhsantanna ▴ 610
5
votes
11
replies
3.5k
views
All reads with mapq value <= 1, htseq does not attribute counts to any feature
rnaseq mapq
8.1 years ago by fhsantanna ▴ 610
0
votes
1
reply
3.5k
views
Comment: C: All reads with mapq value <= 1, htseq does not attribute counts to any feature
8.1 years ago by fhsantanna ▴ 610
9
votes
2
replies
2.4k
views
Incompatibility between bbmap and htseq?
bbmap htseq
updated 8.1 years ago by 142k • written 8.1 years ago by ▴ 610
0
votes
0
replies
3.2k
views
Comment: C: gbk2faa: why is it not working for refseq gbk?
8.3 years ago by fhsantanna ▴ 610
1
vote
0
replies
3.2k
views
Comment: C: gbk2faa: why is it not working for refseq gbk?
8.3 years ago by fhsantanna ▴ 610
3
votes
5
replies
3.2k
views
gbk2faa: why is it not working for refseq gbk?
biopython
updated 21 months ago by 43k • written 8.3 years ago by ▴ 610
1
vote
3
replies
2.3k
views
Reduce redundancy of alignment based on taxonomy and identity
CD-HIT alignment redundancy
8.3 years ago by fhsantanna ▴ 610
0
votes
0
replies
3.7k
views
Comment: C: De novo genome assembly using Ion Proton data: which assembler do you recommend?
8.6 years ago by fhsantanna ▴ 610
0
votes
1
reply
1.6k
views
Comment: C: Why some genomes are not available in genbank ftp?
8.9 years ago by fhsantanna ▴ 610
2
votes
3
replies
1.6k
views
Why some genomes are not available in genbank ftp?
genbank ftp
updated 8.9 years ago by 35k • written 8.9 years ago by ▴ 610
0
votes
1
reply
1.5k
views
Strategies to pare down alignment data
redundancy alignment phylogeny
updated 16 months ago by 43k • written 8.9 years ago by ▴ 610
0
votes
0
replies
8.6k
views
Comment: C: ANI calculation: alternatives to Jspecies
8.9 years ago by fhsantanna ▴ 610
0
votes
1
reply
8.6k
views
Comment: C: ANI calculation: alternatives to Jspecies
9.0 years ago by fhsantanna ▴ 610
0
votes
1
reply
8.6k
views
Comment: C: ANI calculation: alternatives to Jspecies
9.0 years ago by fhsantanna ▴ 610
0
votes
1
reply
18k
views
Comment: Comment: Extract fasta sequences from a large file using a list of names
updated 15 months ago by 43k • written 9.0 years ago by ▴ 610
0
votes
1
reply
18k
views
Comment: Comment: Extract fasta sequences from a large file using a list of names
updated 15 months ago by 43k • written 9.0 years ago by ▴ 610
0
votes
0
replies
18k
views
Comment: Comment: Extract fasta sequences from a large file using a list of names
updated 15 months ago by 43k • written 9.0 years ago by ▴ 610
0
votes
1
reply
18k
views
Comment: C: Extract fasta sequences from a large file using a list of names
9.0 years ago by fhsantanna ▴ 610
161 results • Page 2 of 4
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