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273
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Comment: Comment: Downsampling fastq file
4 days ago by eesiribloom ▴ 80
1
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181
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Do I need to go back and filter my long-reads?
alignment nanopore filtering QC ONT
updated 11 days ago by 141k • written 11 days ago by ▴ 80
1
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0
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158
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phasing tumor long-reads
nanopore ONT haplotag phasing tumor
15 days ago by eesiribloom ▴ 80
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1
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251
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Comment: Comment: Downsampling long-read BAM files
16 days ago by eesiribloom ▴ 80
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4
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251
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Downsampling long-read BAM files
nanopore BAM QC ONT downsampling
updated 16 days ago by 141k • written 16 days ago by ▴ 80
1
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1
reply
235
views
read length in structural variant calling
nanopore SV QC ONT variant
updated 25 days ago by ★ 1.9k • written 27 days ago by ▴ 80
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0
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276
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Comment: Comment: comparing VCF files
4 weeks ago by eesiribloom ▴ 80
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2
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276
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comparing VCF files
long-reads VCF variants ONT nanopore
4 weeks ago by eesiribloom ▴ 80
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0
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663
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Comment: Comment: somatic variant calling without matched normal in long-reads
4 weeks ago by eesiribloom ▴ 80
3
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5
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663
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somatic variant calling without matched normal in long-reads
variants cancer illumina ONT nanopore
4 weeks ago by eesiribloom ▴ 80
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0
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663
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Comment: Comment: somatic variant calling without matched normal in long-reads
3 months ago by eesiribloom ▴ 80
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0
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574
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Comment: Comment: Filtering long read data
3 months ago by eesiribloom ▴ 80
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0
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2.3k
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Comment: Comment: Basecalling with dorado
3 months ago by eesiribloom ▴ 80
2
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3
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574
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Filtering long read data
dorado alignment filtering QC nanopore
3 months ago by eesiribloom ▴ 80
1
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4
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1.0k
views
Filtering qscore on dorado
dorado filtering QC nanopore Guppy
5 months ago by eesiribloom ▴ 80
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0
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1.0k
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Answer: Answer: Filtering qscore on dorado
5 months ago by eesiribloom ▴ 80
0
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1
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1.0k
views
Comment: Comment: Filtering qscore on dorado
5 months ago by eesiribloom ▴ 80
2
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6
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2.3k
views
Basecalling with dorado
variants dorado alignment methylation nanopore
3 months ago by eesiribloom ▴ 80
1
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0
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2.3k
views
Comment: Comment: Basecalling with dorado
updated 6 months ago by 6.4k • written 6 months ago by ▴ 80
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1
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2.3k
views
Comment: Comment: Basecalling with dorado
6 months ago by eesiribloom ▴ 80
0
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1
reply
2.3k
views
Comment: Comment: Basecalling with dorado
6 months ago by eesiribloom ▴ 80
1
vote
0
replies
2.1k
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Answer: Answer: Minfi probe filtering
6 months ago by eesiribloom ▴ 80
0
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0
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921
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Comment: Comment: filtering sniffles variants for precise calls
10 months ago by eesiribloom ▴ 80
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2
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921
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filtering sniffles variants for precise calls
sniffles vcf variation
10 months ago by eesiribloom ▴ 80
0
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2
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672
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Comparing variant calls
bedtools VCF bcftools
updated 10 months ago by 43k • written 12 months ago by ▴ 80
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0
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353
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multiple testing in 450K array data
minfi methylation 450K epigenetics statistics
12 months ago by eesiribloom ▴ 80
1
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1
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521
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Controlling for FDR in 450k methylation microarray data
minfi methylation 450k limma epigenetics
updated 13 months ago by 3.9k • written 13 months ago by ▴ 80
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0
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509
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Bumphunter function in minfi
minfi methylation DMR bumphunter R
updated 13 months ago by 87k • written 13 months ago by ▴ 80
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0
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377
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updating annotation of illumina human methylation 450k data
minfi methylation 450k annotation infinium
14 months ago by eesiribloom ▴ 80
0
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1
reply
962
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Comment: Comment: Dealing with missing (NA) values in my 450K methylation array dataset
14 months ago by eesiribloom ▴ 80
1
vote
3
replies
962
views
Dealing with missing (NA) values in my 450K methylation array dataset
minfi PCA expression Methylation R
updated 14 months ago by ★ 2.0k • written 14 months ago by ▴ 80
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1
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770
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Comment: Comment: Downloading 450k methylation data from GEO
15 months ago by eesiribloom ▴ 80
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3
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770
views
Downloading 450k methylation data from GEO
minfi 450K IDAT Methylation GEO
updated 15 months ago by 141k • written 15 months ago by ▴ 80
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