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Comment: Comment: is there publicly available tool for assembly of bionano data
12 weeks ago by eebloom ▴ 110
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1
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3.8k
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Comment: Comment: is there publicly available tool for assembly of bionano data
3 months ago by eebloom ▴ 110
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0
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3.8k
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Comment: Comment: is there publicly available tool for assembly of bionano data
3 months ago by eebloom ▴ 110
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0
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3.8k
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Comment: Comment: is there publicly available tool for assembly of bionano data
3 months ago by eebloom ▴ 110
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11
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3.8k
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is there publicly available tool for assembly of bionano data
OM bionano assembly alignment
12 weeks ago by eebloom ▴ 110
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0
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897
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Comment: Comment: How to install BioNano Access tool to visualize Bionano optical map outputs?
3 months ago by eebloom ▴ 110
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0
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3.6k
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Comment: Comment: VCF2MAF structural variant file issue.
5 months ago by eebloom ▴ 110
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0
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436
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How best to classify consensus SVs merged from multiple callers
SV annotation variants nanopore WGS
8 months ago by eebloom ▴ 110
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0
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4.0k
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Comment: Comment: [E::bwa_idx_load_from_disk] fail to locate the index files [main_samview] fail t
9 months ago by eebloom ▴ 110
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1
reply
665
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assembling human mitochondrial genomes with nanopore long reads
ONT assembly genome mitochondria nanopore
11 months ago by eebloom ▴ 110
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2.0k
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Comment: Comment: somatic variant calling without matched normal in long-reads
11 months ago by eebloom ▴ 110
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0
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1.2k
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Comment: Comment: somatic copy number calling with ONT long-reads
12 months ago by eebloom ▴ 110
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2
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1.2k
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somatic copy number calling with ONT long-reads
ONT somatic cancer CNV nanopore
12 months ago by eebloom ▴ 110
1
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1
reply
654
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Generally how are non-canonical chromosomes treated in human variation studies
variants SV assembly WGS
updated 13 months ago by 154k • written 13 months ago by ▴ 110
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0
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621
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somatic SV calling with bionano optical mapping data
OM SV bionano alignment variants
14 months ago by eebloom ▴ 110
0
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0
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615
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whatshap ploidy error on female sample
ONT ploidy phasing nanopore
updated 15 months ago by 45k • written 15 months ago by ▴ 110
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0
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1.1k
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Comment: Comment: Annotating enhancer elements (GRCh38)
15 months ago by eebloom ▴ 110
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2
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1.1k
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Annotating enhancer elements (GRCh38)
annotation features enhancers
15 months ago by eebloom ▴ 110
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0
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1.0k
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Comment: Comment: read length in structural variant calling
18 months ago by eebloom ▴ 110
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0
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2.4k
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Comment: Comment: Downsampling long-read BAM files
18 months ago by eebloom ▴ 110
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1
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1.4k
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Comment: Comment: Do I need to go back and filter my long-reads?
18 months ago by eebloom ▴ 110
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1
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1.4k
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Comment: Comment: Do I need to go back and filter my long-reads?
18 months ago by eebloom ▴ 110
1
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7
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2.4k
views
Downsampling long-read BAM files
nanopore BAM QC ONT downsampling
18 months ago by eebloom ▴ 110
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1
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2.4k
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Answer: Answer: Downsampling long-read BAM files
18 months ago by eebloom ▴ 110
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0
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2.2k
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Comment: Comment: Downsampling fastq file
19 months ago by eebloom ▴ 110
1
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6
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1.4k
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Do I need to go back and filter my long-reads?
alignment nanopore filtering QC ONT
updated 18 months ago by 154k • written 19 months ago by ▴ 110
1
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0
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610
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phasing tumor long-reads
nanopore ONT haplotag phasing tumor
18 months ago by eebloom ▴ 110
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1
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2.4k
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Comment: Comment: Downsampling long-read BAM files
19 months ago by eebloom ▴ 110
1
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2
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1.0k
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read length in structural variant calling
nanopore SV QC ONT variant
18 months ago by eebloom ▴ 110
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0
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1.2k
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Comment: Comment: comparing VCF files
20 months ago by eebloom ▴ 110
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2
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1.2k
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comparing VCF files
long-reads VCF variants ONT nanopore
20 months ago by eebloom ▴ 110
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0
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2.0k
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Comment: Comment: somatic variant calling without matched normal in long-reads
20 months ago by eebloom ▴ 110
3
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6
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2.0k
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somatic variant calling without matched normal in long-reads
variants cancer illumina ONT nanopore
11 months ago by eebloom ▴ 110
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0
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2.0k
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Comment: Comment: somatic variant calling without matched normal in long-reads
22 months ago by eebloom ▴ 110
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0
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1.6k
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Comment: Comment: Filtering long read data
22 months ago by eebloom ▴ 110
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0
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6.0k
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Comment: Comment: Basecalling with dorado
22 months ago by eebloom ▴ 110
2
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3
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1.6k
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Filtering long read data
dorado alignment filtering QC nanopore
22 months ago by eebloom ▴ 110
1
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4
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3.7k
views
Filtering qscore on dorado
dorado filtering QC nanopore Guppy
18 months ago by eebloom ▴ 110
0
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0
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3.7k
views
Answer: Answer: Filtering qscore on dorado
18 months ago by eebloom ▴ 110
0
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1
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3.7k
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Comment: Comment: Filtering qscore on dorado
2.1 years ago by eebloom ▴ 110
2
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6
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6.0k
views
Basecalling with dorado
variants dorado alignment methylation nanopore
22 months ago by eebloom ▴ 110
1
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0
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6.0k
views
Comment: Comment: Basecalling with dorado
updated 2.1 years ago by 8.1k • written 2.1 years ago by ▴ 110
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1
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6.0k
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Comment: Comment: Basecalling with dorado
2.1 years ago by eebloom ▴ 110
0
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1
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6.0k
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Comment: Comment: Basecalling with dorado
2.1 years ago by eebloom ▴ 110
1
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0
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3.1k
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Answer: Answer: Minfi probe filtering
2.1 years ago by eebloom ▴ 110
0
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0
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1.9k
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Comment: Comment: filtering sniffles variants for precise calls
2.4 years ago by eebloom ▴ 110
0
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2
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1.9k
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filtering sniffles variants for precise calls
sniffles vcf variation
2.4 years ago by eebloom ▴ 110
0
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2
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1.3k
views
Comparing variant calls
bedtools VCF bcftools
updated 2.4 years ago by 45k • written 2.6 years ago by ▴ 110
0
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0
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720
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multiple testing in 450K array data
minfi methylation 450K epigenetics statistics
2.6 years ago by eebloom ▴ 110
2
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1
reply
1.1k
views
Controlling for FDR in 450k methylation microarray data
minfi methylation 450k limma epigenetics
updated 2.7 years ago by 5.2k • written 2.7 years ago by ▴ 110
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