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1
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5
replies
3.5k
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MACS, effective genome size
ChIP-Seq MACS
updated 4.3 years ago by 20 • written 9.9 years ago by ▴ 90
0
votes
4
replies
1.3k
views
Polymerase slippage filtering
RNA-Seq variants
updated 5.3 years ago by 20 • written 5.7 years ago by ▴ 90
6
votes
5
replies
2.3k
views
Interpreting of ChiP-seq results
ChIP-Seq genes
updated 2.4 years ago by 43k • written 9.8 years ago by ▴ 90
8
votes
10
replies
5.0k
views
alternative splicing analysis
ChIP-Seq alternative-splicing
updated 2.5 years ago by 43k • written 9.8 years ago by ▴ 90
0
votes
1
reply
2.0k
views
Sanger dye blobs correction
dye-blobs sanger quality-control
updated 20 months ago by 43k • written 8.4 years ago by ▴ 90
1
vote
4
replies
2.0k
views
Short Tandem Repeats analysis
tandem-repeats
updated 20 months ago by 43k • written 8.4 years ago by ▴ 90
3
votes
2
replies
4.0k
views
Chip-seq reads' trimming
fastqc chip-seq
updated 22 months ago by 43k • written 9.1 years ago by ▴ 90
1
vote
2
replies
1.9k
views
Chip-Chip peaks calling
drosophila chip-chip
updated 18 months ago by 43k • written 8.8 years ago by ▴ 90
2
votes
4
replies
4.0k
views
Differential binding analysis
diffbind chip-on-chip chip-seq
updated 2.3 years ago by 43k • written 9.6 years ago by ▴ 90
10
votes
6
replies
8.3k
views
SRA to BAM
sam-dump sra
updated 22 months ago by 43k • written 9.1 years ago by ▴ 90
2
votes
5
replies
3.6k
views
Expression changes correlation
knockdown RNA-Seq
updated 2.2 years ago by 43k • written 9.5 years ago by ▴ 90
0
votes
1
reply
1.6k
views
Correlation of expression changes
knockdown expression
updated 2.2 years ago by 43k • written 9.5 years ago by ▴ 90
2
votes
1
reply
2.3k
views
Chip-seq motif conservation
motif ChIP-Seq
updated 2.2 years ago by 43k • written 9.5 years ago by ▴ 90
1
vote
4
replies
4.7k
views
average coverage, chip-seq
coverage ChIP-Seq
updated 3.1 years ago by 43k • written 9.5 years ago by ▴ 90
1
vote
1
reply
2.5k
views
matchPWM problem, PSSM
R Bioconductor PWM PSSM
updated 3.1 years ago by 43k • written 9.5 years ago by ▴ 90
1
vote
0
replies
2.6k
views
Enrichment of ChiP over input comparison
wiggle chip differentialbinding
updated 3.1 years ago by 43k • written 9.5 years ago by ▴ 90
0
votes
0
replies
1.4k
views
enrichment to input correlation
ChIP-Seq
updated 3.1 years ago by 43k • written 9.5 years ago by ▴ 90
4
votes
4
replies
2.7k
views
Alternative splicing analysis, rna-seq
RNA-Seq alternative-splicing cufflinks
updated 2.3 years ago by 43k • written 9.6 years ago by ▴ 90
1
vote
2
replies
3.9k
views
Comparison of annotated genomes
de-novo-assembly comparison gbk
updated 2.4 years ago by 43k • written 9.7 years ago by ▴ 90
1
vote
4
replies
5.4k
views
Diffbind bioconductor, peaks overlapping
ChIP-Seq diffbind bioconductor
updated 19 months ago by 43k • written 9.7 years ago by ▴ 90
2
votes
4
replies
2.5k
views
Isoforms' unique loci
alternative-splicing RNA-Seq fpkm
updated 2.4 years ago by 43k • written 9.7 years ago by ▴ 90
16
votes
14
replies
62k
views
7 follow
Convert SAM to BAM
sam RNA-Seq bam
updated 2.4 years ago by 43k • written 9.8 years ago by ▴ 90
3
votes
5
replies
3.3k
views
Quality control ChiP-Seq
ChIP-Seq QC trimming
updated 2.4 years ago by 43k • written 9.8 years ago by ▴ 90
4
votes
5
replies
7.2k
views
chip-seq analysis (bowtie2, MACS2)
bowtie2 macs2 alignment fastq
updated 2.5 years ago by 43k • written 9.8 years ago by ▴ 90
2
votes
1
reply
4.0k
views
macs and bedtools
bedtools macs peaks
updated 9.8 years ago by ★ 3.9k • written 9.8 years ago by ▴ 90
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