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36
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25
replies
37k
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15 follow
Downsampling dataset with more than 60 million reads
next-gen RNA-Seq
updated 16 months ago by ▴ 60 • written 10.7 years ago by ▴ 90
1
vote
1
reply
993
views
comparing two ratios in RNASeq data
DESeq2 RNASEQ
updated 6.4 years ago by ★ 3.2k • written 6.4 years ago by ▴ 90
0
votes
2
replies
2.9k
views
Which method is good for getting logFC for pairwise comparsion of replicates?
RNA-Seq
updated 2.2 years ago by 45k • written 9.9 years ago by ▴ 90
0
votes
1
reply
2.1k
views
Which GTF file to use while detecting known and novel non coding RNA
RNA-Seq GTF long non coding RNA
updated 7.8 years ago by • 0 • written 8.5 years ago by ▴ 90
0
votes
0
replies
2.0k
views
microRNA data analysis tools
RNA microRNA
8.2 years ago by mike ▴ 90
6
votes
12
replies
8.8k
views
Counting number of duplicated reads from fastq file
NGS
updated 3.0 years ago by 45k • written 10.2 years ago by ▴ 90
2
votes
3
replies
2.2k
views
convert .fasta to .gft fomat
Assembly
updated 8.4 years ago by 9.2k • written 8.4 years ago by ▴ 90
0
votes
0
replies
2.3k
views
Comment: C: Read alignment plot for RNA-Seq data
8.5 years ago by mike ▴ 90
0
votes
0
replies
2.3k
views
Answer: A: Read alignment plot for RNA-Seq data
8.5 years ago by mike ▴ 90
2
votes
3
replies
2.3k
views
Read alignment plot for RNA-Seq data
RNA-Seq
8.5 years ago by mike ▴ 90
2
votes
2
replies
1.7k
views
trimming 75bp long reads for denovo assembly
RNA-Seq Assembly
updated 8.5 years ago by ★ 3.8k • written 8.5 years ago by ▴ 90
0
votes
0
replies
3.1k
views
Comment: C: pathway analysis tools for xenopus
8.8 years ago by mike ▴ 90
0
votes
2
replies
3.1k
views
Comment: C: pathway analysis tools for xenopus
8.8 years ago by mike ▴ 90
0
votes
0
replies
3.1k
views
Comment: C: pathway analysis tools for xenopus
8.8 years ago by mike ▴ 90
0
votes
2
replies
3.1k
views
Comment: C: pathway analysis tools for xenopus
8.8 years ago by mike ▴ 90
0
votes
1
reply
3.1k
views
Comment: C: pathway analysis tools for xenopus
8.8 years ago by mike ▴ 90
0
votes
1
reply
3.1k
views
Comment: C: pathway analysis tools for xenopus
8.8 years ago by mike ▴ 90
0
votes
1
reply
3.1k
views
Comment: C: pathway analysis tools for xenopus
8.8 years ago by mike ▴ 90
0
votes
15
replies
3.1k
views
pathway analysis tools for xenopus
pathways omics xenopus
updated 8.8 years ago by 7.6k • written 8.8 years ago by ▴ 90
0
votes
1
reply
3.3k
views
Comment: C: differential expression analysis tools for single end reads
9.7 years ago by mike ▴ 90
0
votes
2
replies
3.3k
views
Comment: C: differential expression analysis tools for single end reads
9.7 years ago by mike ▴ 90
5
votes
9
replies
3.3k
views
differential expression analysis tools for single end reads
rna-seq next-gen
updated 2.5 years ago by 45k • written 9.7 years ago by ▴ 90
0
votes
1
reply
8.8k
views
Comment: C: Counting number of duplicated reads from fastq file
10.2 years ago by mike ▴ 90
0
votes
1
reply
8.8k
views
Comment: C: Counting number of duplicated reads from fastq file
10.2 years ago by mike ▴ 90
0
votes
1
reply
8.8k
views
Comment: C: Counting number of duplicated reads from fastq file
10.2 years ago by mike ▴ 90
0
votes
1
reply
2.3k
views
Comment: Comment: change replicate numbers with cummeRbund
updated 3.1 years ago by 45k • written 10.4 years ago by ▴ 90
0
votes
3
replies
2.3k
views
change replicate numbers with cummeRbund
RNA-Seq
updated 3.1 years ago by 45k • written 10.4 years ago by ▴ 90
0
votes
1
reply
3.8k
views
Warning: Using default Gaussian distribution due to insufficient paired-end reads in open ranges
RNA-Seq
updated 3.2 years ago by 45k • written 10.4 years ago by ▴ 90
0
votes
1
reply
4.9k
views
Comment: C: Warning in CuffDiff when using novel transcripts from CuffMerge as input
10.4 years ago by mike ▴ 90
0
votes
1
reply
37k
views
Comment: C: Downsampling dataset with more than 60 million reads
10.7 years ago by mike ▴ 90
0
votes
0
replies
37k
views
Comment: Comment: Downsampling dataset with more than 60 million reads
updated 3.3 years ago by 45k • written 10.7 years ago by ▴ 90
0
votes
1
reply
37k
views
Comment: C: Downsampling dataset with more than 60 million reads
10.7 years ago by mike ▴ 90
0
votes
1
reply
2.7k
views
Comment: C: Convert FPKM value to FPK value
10.7 years ago by mike ▴ 90
2
votes
3
replies
2.7k
views
Convert FPKM value to FPK value
cuffdiff RNA-Seq
updated 3.4 years ago by 45k • written 10.7 years ago by ▴ 90
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