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36
votes
25
replies
34k
views
15 follow
Downsampling dataset with more than 60 million reads
next-gen
RNA-Seq
updated 8 months ago by
asalimih
▴ 60 • written 10.0 years ago by
mike
▴ 90
1
vote
1
reply
891
views
comparing two ratios in RNASeq data
DESeq2
RNASEQ
updated 5.8 years ago by
Martombo
★ 3.1k • written 5.8 years ago by
mike
▴ 90
0
votes
2
replies
2.8k
views
Which method is good for getting logFC for pairwise comparsion of replicates?
RNA-Seq
updated 19 months ago by
Ram
44k • written 9.3 years ago by
mike
▴ 90
0
votes
1
reply
2.0k
views
Which GTF file to use while detecting known and novel non coding RNA
RNA-Seq
GTF
long non coding RNA
updated 7.1 years ago by
azimzadeh.jam.sadegh
• 0 • written 7.8 years ago by
mike
▴ 90
0
votes
0
replies
1.9k
views
microRNA data analysis tools
RNA
microRNA
7.5 years ago by
mike
▴ 90
6
votes
12
replies
8.2k
views
Counting number of duplicated reads from fastq file
NGS
updated 2.4 years ago by
Ram
44k • written 9.6 years ago by
mike
▴ 90
2
votes
3
replies
2.0k
views
convert .fasta to .gft fomat
Assembly
updated 7.8 years ago by
Juke34
8.6k • written 7.8 years ago by
mike
▴ 90
0
votes
0
replies
2.2k
views
Comment:
C: Read alignment plot for RNA-Seq data
7.9 years ago by
mike
▴ 90
0
votes
0
replies
2.2k
views
Answer:
A: Read alignment plot for RNA-Seq data
7.9 years ago by
mike
▴ 90
2
votes
3
replies
2.2k
views
Read alignment plot for RNA-Seq data
RNA-Seq
7.9 years ago by
mike
▴ 90
2
votes
2
replies
1.5k
views
trimming 75bp long reads for denovo assembly
RNA-Seq
Assembly
updated 7.9 years ago by
Brice Sarver
★ 3.8k • written 7.9 years ago by
mike
▴ 90
0
votes
0
replies
2.6k
views
Comment:
C: pathway analysis tools for xenopus
8.1 years ago by
mike
▴ 90
0
votes
2
replies
2.6k
views
Comment:
C: pathway analysis tools for xenopus
8.2 years ago by
mike
▴ 90
0
votes
0
replies
2.6k
views
Comment:
C: pathway analysis tools for xenopus
8.2 years ago by
mike
▴ 90
0
votes
2
replies
2.6k
views
Comment:
C: pathway analysis tools for xenopus
8.2 years ago by
mike
▴ 90
0
votes
1
reply
2.6k
views
Comment:
C: pathway analysis tools for xenopus
8.2 years ago by
mike
▴ 90
0
votes
1
reply
2.6k
views
Comment:
C: pathway analysis tools for xenopus
8.2 years ago by
mike
▴ 90
0
votes
1
reply
2.6k
views
Comment:
C: pathway analysis tools for xenopus
8.2 years ago by
mike
▴ 90
0
votes
15
replies
2.6k
views
pathway analysis tools for xenopus
pathways
omics
xenopus
updated 8.2 years ago by
EagleEye
7.6k • written 8.2 years ago by
mike
▴ 90
0
votes
1
reply
3.0k
views
Comment:
C: differential expression analysis tools for single end reads
9.1 years ago by
mike
▴ 90
0
votes
2
replies
3.0k
views
Comment:
C: differential expression analysis tools for single end reads
9.1 years ago by
mike
▴ 90
5
votes
9
replies
3.0k
views
differential expression analysis tools for single end reads
rna-seq
next-gen
updated 22 months ago by
Ram
44k • written 9.1 years ago by
mike
▴ 90
0
votes
1
reply
8.2k
views
Comment:
C: Counting number of duplicated reads from fastq file
9.6 years ago by
mike
▴ 90
0
votes
1
reply
8.2k
views
Comment:
C: Counting number of duplicated reads from fastq file
9.6 years ago by
mike
▴ 90
0
votes
1
reply
8.2k
views
Comment:
C: Counting number of duplicated reads from fastq file
9.6 years ago by
mike
▴ 90
0
votes
1
reply
2.2k
views
Comment:
Comment: change replicate numbers with cummeRbund
updated 2.5 years ago by
Ram
44k • written 9.7 years ago by
mike
▴ 90
0
votes
3
replies
2.2k
views
change replicate numbers with cummeRbund
RNA-Seq
updated 2.5 years ago by
Ram
44k • written 9.7 years ago by
mike
▴ 90
0
votes
1
reply
3.7k
views
Warning: Using default Gaussian distribution due to insufficient paired-end reads in open ranges
RNA-Seq
updated 2.5 years ago by
Ram
44k • written 9.8 years ago by
mike
▴ 90
0
votes
1
reply
4.7k
views
Comment:
C: Warning in CuffDiff when using novel transcripts from CuffMerge as input
9.8 years ago by
mike
▴ 90
0
votes
1
reply
34k
views
Comment:
C: Downsampling dataset with more than 60 million reads
10.0 years ago by
mike
▴ 90
0
votes
0
replies
34k
views
Comment:
Comment: Downsampling dataset with more than 60 million reads
updated 2.7 years ago by
Ram
44k • written 10.0 years ago by
mike
▴ 90
0
votes
1
reply
34k
views
Comment:
C: Downsampling dataset with more than 60 million reads
10.0 years ago by
mike
▴ 90
0
votes
1
reply
2.5k
views
Comment:
C: Convert FPKM value to FPK value
10.1 years ago by
mike
▴ 90
2
votes
3
replies
2.5k
views
Convert FPKM value to FPK value
cuffdiff
RNA-Seq
updated 2.8 years ago by
Ram
44k • written 10.1 years ago by
mike
▴ 90
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