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5
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3
replies
758
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asking for optimized bash scripting
analysis
updated 3 months ago by 22k • written 3 months ago by ▴ 80
2
votes
2
replies
3.5k
views
why bwa-mem only return one read with pair-read end
sequencing bwa-mem
updated 3 months ago by ★ 1.7k • written 3 months ago by ▴ 80
0
votes
0
replies
784
views
Comment: Comment: Mapping to a template sequece
3 months ago by QX ▴ 80
0
votes
2
replies
784
views
Comment: Comment: Mapping to a template sequece
3 months ago by QX ▴ 80
1
vote
5
replies
784
views
Mapping to a template sequece
sequencing
3 months ago by QX ▴ 80
0
votes
0
replies
762
views
Comment: Comment: how shoud the phred score be intepreted?
4 months ago by QX ▴ 80
0
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1
reply
762
views
Comment: Comment: how shoud the phred score be intepreted?
4 months ago by QX ▴ 80
2
votes
4
replies
762
views
how shoud the phred score be intepreted?
sequencing
updated 4 months ago by 154k • written 4 months ago by ▴ 80
0
votes
1
reply
424
views
should I remove the transcripts from annotate peak region in ATAC-seq
ATAC-seq
updated 4 months ago by ★ 1.7k • written 4 months ago by ▴ 80
0
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0
replies
1.1k
views
Comment: Comment: Best way to install R packages on an HPC?
4 months ago by QX ▴ 80
0
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0
replies
607
views
Answer: Answer: ATAC seq: from peaks to differential analysis ??
4 months ago by QX ▴ 80
0
votes
1
reply
518
views
checking the sequences that share origin
sequencing
updated 4 months ago by 154k • written 4 months ago by ▴ 80
3
votes
2
replies
775
views
Alignment algorithm for DNA sequencing
sequencing data DNA
updated 7 months ago by 89k • written 7 months ago by ▴ 80
0
votes
0
replies
1.2k
views
Comment: Comment: Is there a proper way to choose bins in barplot
9 months ago by QX ▴ 80
0
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1
reply
1.2k
views
Comment: Comment: Is there a proper way to choose bins in barplot
9 months ago by QX ▴ 80
0
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0
replies
1.2k
views
Comment: Comment: Is there a proper way to choose bins in barplot
9 months ago by QX ▴ 80
3
votes
6
replies
1.2k
views
Is there a proper way to choose bins in barplot
visualization plot bar
9 months ago by QX ▴ 80
1
vote
0
replies
1.1k
views
Answer: Answer: CNV Analysis and Visualisation
9 months ago by QX ▴ 80
2
votes
2
replies
651
views
statistical testing for MS/MS proteomics bulk samples
DEG proteomics
updated 12 months ago by 89k • written 12 months ago by ▴ 80
0
votes
0
replies
2.2k
views
Comment: Comment: Gatk haplotyper
12 months ago by QX ▴ 80
0
votes
1
reply
1.2k
views
Comment: Comment: coordinate vs contributions for the variables in PCA using FactoMineR
12 months ago by QX ▴ 80
0
votes
0
replies
1.2k
views
Comment: Comment: coordinate vs contributions for the variables in PCA using FactoMineR
12 months ago by QX ▴ 80
2
votes
4
replies
1.2k
views
coordinate vs contributions for the variables in PCA using FactoMineR
PCA
updated 12 months ago by 6.5k • written 12 months ago by ▴ 80
0
votes
0
replies
1.7k
views
Comment: Comment: PCA for count data
12 months ago by QX ▴ 80
0
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0
replies
1.7k
views
Comment: Comment: PCA for count data
12 months ago by QX ▴ 80
0
votes
1
reply
1.7k
views
Comment: Comment: PCA for count data
12 months ago by QX ▴ 80
3
votes
6
replies
1.7k
views
PCA for count data
PCA
12 months ago by QX ▴ 80
0
votes
0
replies
1.1k
views
Comment: Comment: DEseq2 with different designs matrix
14 months ago by QX ▴ 80
0
votes
3
replies
1.1k
views
DEseq2 with different designs matrix
DEseq2
14 months ago by QX ▴ 80
0
votes
0
replies
424
views
Different position for same gene using annotatePeak from ChIPseeker
ChIPseeker ATACseq
14 months ago by QX ▴ 80
0
votes
0
replies
414
views
plotHeatmap from deeptools explain
atac-seq
14 months ago by QX ▴ 80
0
votes
0
replies
2.4k
views
Comment: Comment: difference between macs2 callpeak using bam and bed file
14 months ago by QX ▴ 80
1
vote
1
reply
2.4k
views
Comment: Comment: difference between macs2 callpeak using bam and bed file
14 months ago by QX ▴ 80
5
votes
4
replies
2.4k
views
difference between macs2 callpeak using bam and bed file
macs2 atac-seq
14 months ago by QX ▴ 80
0
votes
0
replies
1.1k
views
Comment: Comment: trimming 151bp to shorter k-mer in ATAC-seq analysis
14 months ago by QX ▴ 80
0
votes
0
replies
4.4k
views
Comment: Comment: ATAC-seq peak calling
14 months ago by QX ▴ 80
0
votes
1
reply
1.4k
views
Comment: Comment: call peak for all replicates in all conditions using macs2
14 months ago by QX ▴ 80
0
votes
0
replies
1.4k
views
Comment: Comment: call peak for all replicates in all conditions using macs2
14 months ago by QX ▴ 80
0
votes
1
reply
1.1k
views
Comment: Comment: trimming 151bp to shorter k-mer in ATAC-seq analysis
14 months ago by QX ▴ 80
2
votes
5
replies
1.4k
views
call peak for all replicates in all conditions using macs2
macs2 ATACseq
updated 14 months ago by ▴ 150 • written 14 months ago by ▴ 80
0
votes
0
replies
2.9k
views
Comment: Comment: How get density plot TSS region for genes of interest
14 months ago by QX ▴ 80
1
vote
4
replies
1.1k
views
trimming 151bp to shorter k-mer in ATAC-seq analysis
ATAC-seq
14 months ago by QX ▴ 80
0
votes
0
replies
12k
views
Comment: Comment: Using featureCounts and DESeq2 to look at differences between ATAC-seq condition
14 months ago by QX ▴ 80
0
votes
1
reply
2.9k
views
Comment: Comment: How get density plot TSS region for genes of interest
14 months ago by QX ▴ 80
0
votes
1
reply
2.1k
views
Comment: Comment: which bed file should be used for deeptools computeMatrix
15 months ago by QX ▴ 80
0
votes
1
reply
2.1k
views
Comment: Comment: which bed file should be used for deeptools computeMatrix
15 months ago by QX ▴ 80
3
votes
6
replies
2.1k
views
which bed file should be used for deeptools computeMatrix
atac-seq deeptools
updated 15 months ago by ★ 4.7k • written 15 months ago by ▴ 80
0
votes
0
replies
2.7k
views
Comment: Comment: Plotting chip signal at TSSs with deeptools
15 months ago by QX ▴ 80
0
votes
0
replies
515
views
reference-point setting from computeMatrix
ATACseq
15 months ago by QX ▴ 80
0
votes
0
replies
409
views
which distance used for kmeans in deeptools plotHeatmap
atac deeptools
15 months ago by QX ▴ 80
134 results • Page 1 of 3
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