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Comment: C: bcftools doesn't normalize the vcf file
6.8 years ago by seta ★ 1.9k
0
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1
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9.6k
views
Comment: C: bcftools doesn't normalize the vcf file
6.8 years ago by seta ★ 1.9k
0
votes
1
reply
9.6k
views
Comment: C: bcftools doesn't normalize the vcf file
6.8 years ago by seta ★ 1.9k
0
votes
1
reply
9.6k
views
Comment: C: bcftools doesn't normalize the vcf file
6.8 years ago by seta ★ 1.9k
0
votes
0
replies
9.6k
views
Comment: C: bcftools doesn't normalize the vcf file
6.8 years ago by seta ★ 1.9k
3
votes
9
replies
9.6k
views
bcftools doesn't normalize the vcf file
vcf bcftools normalize
updated 2.6 years ago by 45k • written 6.8 years ago by ★ 1.9k
0
votes
3
replies
6.1k
views
Comment: C: RNA-Seq time series analysis using a DESeq2 spline approach yields far too many
6.8 years ago by seta ★ 1.9k
0
votes
0
replies
1.0k
views
How to compare haplotype with a list of nucleotide variations
blood group prediction haplotype NGS
6.8 years ago by seta ★ 1.9k
0
votes
1
reply
1.3k
views
Comment: C: ENSEMBL Gene IDs for Human Inflammation
6.8 years ago by seta ★ 1.9k
0
votes
0
replies
2.6k
views
Comment: C: Fst calculation between my own population and 1000 genome populations
6.8 years ago by seta ★ 1.9k
0
votes
3
replies
2.6k
views
Fst calculation between my own population and 1000 genome populations
Fst 1000 genome population
updated 6.8 years ago by ▴ 50 • written 6.9 years ago by ★ 1.9k
1
vote
7
replies
3.1k
views
VCF file manipulation for extracting the required information
variant calling genome sequencing VCF
updated 6.9 years ago by 12k • written 7.5 years ago by ★ 1.9k
5
votes
6
replies
3.7k
views
A strange problem with annotation of vcf file
genome annotation gatk4 bcftools vcf
updated 6.9 years ago by 12k • written 7.2 years ago by ★ 1.9k
0
votes
1
reply
1.6k
views
Please help with Eagle
Eagle Phasing vcf
updated 6.9 years ago by 12k • written 6.9 years ago by ★ 1.9k
1
vote
1
reply
8.7k
views
Comment: C: VCF file phasing by SHAPEIT
6.9 years ago by seta ★ 1.9k
0
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1
reply
5.4k
views
Comment: C: Why removing SNPs with MAF<5% for Fst calculation?
6.9 years ago by seta ★ 1.9k
0
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1
reply
5.4k
views
Comment: C: Why removing SNPs with MAF<5% for Fst calculation?
6.9 years ago by seta ★ 1.9k
0
votes
2
replies
4.1k
views
calculating allele frequency difference or Fst value ?
allele frequency population Fst
updated 6.9 years ago by ▴ 160 • written 7.0 years ago by ★ 1.9k
0
votes
0
replies
2.4k
views
Comment: C: Problem with checkVCF
6.9 years ago by seta ★ 1.9k
0
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1
reply
8.7k
views
Comment: C: VCF file phasing by Shapiet
6.9 years ago by seta ★ 1.9k
0
votes
0
replies
1.2k
views
Comment: C: False Discovery Rate calculation
6.9 years ago by seta ★ 1.9k
0
votes
1
reply
2.4k
views
Comment: C: Plotting SNPs with different allele frequency between population
6.9 years ago by seta ★ 1.9k
0
votes
1
reply
2.4k
views
Comment: C: Plotting SNPs with different allele frequency between population
6.9 years ago by seta ★ 1.9k
0
votes
5
replies
2.4k
views
Plotting SNPs with different allele frequency between population
SNP plotting population
updated 6.9 years ago by 89k • written 6.9 years ago by ★ 1.9k
0
votes
1
reply
3.8k
views
Comment: C: VEP output and stop gain mutation
7.0 years ago by seta ★ 1.9k
0
votes
1
reply
3.8k
views
Comment: C: VEP output and stop gain mutation
7.0 years ago by seta ★ 1.9k
1
vote
5
replies
7.2k
views
Allele frequency comparison by Fisher's exact test
allele frequency population Fisher's exact test
7.0 years ago by seta ★ 1.9k
0
votes
0
replies
7.2k
views
Comment: C: Allele frequency comparison by Fisher's exact test
7.0 years ago by seta ★ 1.9k
0
votes
1
reply
7.2k
views
Comment: C: Allele frequency comparison by Fisher's exact test
7.0 years ago by seta ★ 1.9k
0
votes
1
reply
1.4k
views
Alt allele count from 1000 genome project
alt allele count 1000 genome
updated 7.0 years ago by 45k • written 7.0 years ago by ★ 1.9k
0
votes
1
reply
3.0k
views
Comment: C: Genomic coordinates from GENCODE annotation file
7.1 years ago by seta ★ 1.9k
0
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0
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3.0k
views
Comment: C: Genomic coordinates from GENCODE annotation file
7.1 years ago by seta ★ 1.9k
2
votes
8
replies
3.0k
views
Genomic coordinates from GENCODE annotation file
GENCODE genomic-coordinates GTF
updated 2.6 years ago by 45k • written 7.1 years ago by ★ 1.9k
0
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1
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3.0k
views
Comment: C: Genomic coordinates from GENCODE annotation file
7.1 years ago by seta ★ 1.9k
3
votes
3
replies
7.9k
views
How to plot length distribution of contigs in the assembly?
plotting assembly length-distribution
updated 3.1 years ago by 45k • written 10.1 years ago by ★ 1.9k
0
votes
0
replies
4.4k
views
Comment: C: Combining snp and indel vcf files with GATK4
7.1 years ago by seta ★ 1.9k
1
vote
2
replies
4.4k
views
Combining snp and indel vcf files with GATK4
varint calling GATK4 combin variant SortVcf
updated 7.1 years ago by ★ 5.0k • written 7.1 years ago by ★ 1.9k
0
votes
1
reply
1.9k
views
Comment: C: Extracting genomic coordinate, feature type and strand for a gene list
7.1 years ago by seta ★ 1.9k
0
votes
1
reply
1.9k
views
Comment: C: Extracting genomic coordinate, feature type and strand for a gene list
7.1 years ago by seta ★ 1.9k
0
votes
6
replies
1.9k
views
Extracting genomic coordinate, feature type and strand for a gene list
gene list genomic coordinate feature type
7.1 years ago by seta ★ 1.9k
0
votes
2
replies
2.2k
views
Access to HMMER software
alignment protein domain HMMAER
updated 3.3 years ago by 45k • written 9.7 years ago by ★ 1.9k
7
votes
6
replies
3.7k
views
Why there are some discrepancies between VEP output and "variation" section of Ensembl?!
SNP VEP output alternative allele Ensembl
updated 7.1 years ago by 12k • written 7.3 years ago by ★ 1.9k
2
votes
0
replies
6.1k
views
Comment: C: Getting allele frequency and zygosity information from several vcf file
7.1 years ago by seta ★ 1.9k
0
votes
1
reply
6.1k
views
Comment: C: Getting allele frequency and zygosity information from several vcf file
7.1 years ago by seta ★ 1.9k
2
votes
7
replies
3.3k
views
blast running for several splitted query
blast alignment RNA-Seq
updated 2.7 years ago by 45k • written 10.5 years ago by ★ 1.9k
0
votes
1
reply
6.1k
views
Comment: C: Getting allele frequency and zygosity information from several vcf file
7.1 years ago by seta ★ 1.9k
0
votes
1
reply
3.3k
views
Comment: C: blast running for several splitted query
updated 7.1 years ago by 45k • written 10.5 years ago by ★ 1.9k
0
votes
1
reply
6.1k
views
Comment: C: Getting allele frequency and zygosity information from several vcf file
7.1 years ago by seta ★ 1.9k
0
votes
1
reply
6.1k
views
Comment: C: Getting allele frequency and zygosity information from several vcf file
7.1 years ago by seta ★ 1.9k
0
votes
1
reply
6.1k
views
Comment: C: Getting allele frequency and zygosity information from several vcf file
7.1 years ago by seta ★ 1.9k
868 results • Page 7 of 18
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