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150
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Useful Bash Commands To Handle Fasta Files
command-line fasta bash
updated 4 months ago by 44k • written 13.0 years ago by ★ 2.9k
1
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0
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1.4k
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Comment: C: Genome aligner that shows annotations too
5.0 years ago by Anima Mundi ★ 2.9k
0
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0
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3.6k
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Answer: A: Extract only sequences that have N nucleotides
updated 5.2 years ago by 44k • written 9.1 years ago by ★ 2.9k
0
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1
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9.6k
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Answer: A: Locating A Sequence In A Fasta File.
updated 5.2 years ago by 44k • written 11.9 years ago by ★ 2.9k
0
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0
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6.5k
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Answer: A: How to concatenate gene sequence?
updated 5.2 years ago by 44k • written 9.2 years ago by ★ 2.9k
0
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1
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32k
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Comment: C: C program to find complementary of DNA sequence
updated 5.2 years ago by 44k • written 9.2 years ago by ★ 2.9k
0
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0
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2.0k
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Comment: C: Distinguish between homo- or heterozygote alleles if you sequence for a gene
5.2 years ago by Anima Mundi ★ 2.9k
1
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1
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2.0k
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Comment: C: Distinguish between homo- or heterozygote alleles if you sequence for a gene
5.2 years ago by Anima Mundi ★ 2.9k
1
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1
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2.0k
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Comment: C: Distinguish between homo- or heterozygote alleles if you sequence for a gene
5.2 years ago by Anima Mundi ★ 2.9k
2
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1
reply
2.0k
views
Answer: A: Distinguish between homo- or heterozygote alleles if you sequence for a gene
5.2 years ago by Anima Mundi ★ 2.9k
1
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0
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1.2k
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Comment: C: Why could we infer a physical time scale (e.g. a billion year) from a phylogenet
5.3 years ago by Anima Mundi ★ 2.9k
0
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0
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7.2k
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Comment: C: Centrimo error: Template does not contain data section
5.4 years ago by Anima Mundi ★ 2.9k
0
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1
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19k
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Comment: C: Is It Possible To Generate A Sam Header Without Any External Header Information?
updated 5.4 years ago by 44k • written 11.9 years ago by ★ 2.9k
0
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0
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7.2k
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Comment: C: Centrimo error: Template does not contain data section
5.4 years ago by Anima Mundi ★ 2.9k
0
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1
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7.2k
views
Answer: A: Centrimo error: Template does not contain data section
5.4 years ago by Anima Mundi ★ 2.9k
0
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1
reply
7.2k
views
Comment: C: Centrimo error: Template does not contain data section
5.4 years ago by Anima Mundi ★ 2.9k
2
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0
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24k
views
Answer: A: How Can I Download The Results From An Ncbi Blast Search?
updated 5.4 years ago by 44k • written 13.4 years ago by ★ 2.9k
0
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0
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6.9k
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Comment: C: Meme-Suite Is Down... Does Anybody Know What'S Happening?
updated 5.4 years ago by 44k • written 13.9 years ago by ★ 2.9k
7
votes
2
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3.0k
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Exhaustive List Of Sequenced Genomes
list genome
updated 5.5 years ago by 20 • written 12.3 years ago by ★ 2.9k
2
votes
0
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21k
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Answer: A: What Is Your Favorite Conserved Protein?
updated 6.1 years ago by 44k • written 11.5 years ago by ★ 2.9k
0
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0
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1.1k
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GenBank entry with apparently unmarked changes
genbank entry item version update
6.2 years ago by Anima Mundi ★ 2.9k
0
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0
replies
4.9k
views
Answer: A: Conversion of full gene description to gene symbols
6.3 years ago by Anima Mundi ★ 2.9k
1
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1
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1.8k
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Answer: A: How to reformat (i.e. to clean) NCBI .fasta archives into a singleline .fasta wi
6.3 years ago by Anima Mundi ★ 2.9k
12
votes
8
replies
5.0k
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How To Find Conserved Regulatory Elements Among Different Genomes?
comparative homology
updated 6.4 years ago by 20 • written 14.0 years ago by ★ 2.9k
0
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0
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9.6k
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Comment: C: Locating A Sequence In A Fasta File.
6.4 years ago by Anima Mundi ★ 2.9k
0
votes
0
replies
2.7k
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Comment: C: Find all sequence of a specific genus amplified by a couple of primers
6.7 years ago by Anima Mundi ★ 2.9k
0
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1
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2.7k
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Answer: A: Find all sequence of a specific genus amplified by a couple of primers
6.7 years ago by Anima Mundi ★ 2.9k
0
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0
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3.5k
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Comment: C: transition to bioinformatics
6.7 years ago by Anima Mundi ★ 2.9k
0
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0
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1.8k
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Comment: C: Change nexus textlabels
6.7 years ago by Anima Mundi ★ 2.9k
1
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0
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1.8k
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Comment: C: Change nexus textlabels
6.7 years ago by Anima Mundi ★ 2.9k
0
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2
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1.8k
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Answer: A: Change nexus textlabels
6.7 years ago by Anima Mundi ★ 2.9k
3
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1
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1.8k
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Answer: A: Finding restriction sites when the gene is on the negative strand
6.7 years ago by Anima Mundi ★ 2.9k
0
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0
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3.2k
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Comment: C: DNA Motif discovery from a large number of FASTA sequences
6.9 years ago by Anima Mundi ★ 2.9k
1
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1
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3.2k
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Comment: C: DNA Motif discovery from a large number of FASTA sequences
6.9 years ago by Anima Mundi ★ 2.9k
0
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0
replies
3.8k
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Comment: C: What does a recruiter expect from a Bioinformatician ?
7.0 years ago by Anima Mundi ★ 2.9k
0
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1
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3.8k
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Comment: C: What does a recruiter expect from a Bioinformatician ?
7.0 years ago by Anima Mundi ★ 2.9k
2
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1
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3.8k
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Comment: C: What does a recruiter expect from a Bioinformatician ?
7.0 years ago by Anima Mundi ★ 2.9k
0
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0
replies
7.0k
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Answer: A: Rename FASTA files according to FASTA file header
7.0 years ago by Anima Mundi ★ 2.9k
0
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1
reply
3.4k
views
Comment: C: Pswms For Rna Binding Proteins
7.2 years ago by Anima Mundi ★ 2.9k
0
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0
replies
9.6k
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Comment: C: Default password for Bio-Linux 8
7.5 years ago by Anima Mundi ★ 2.9k
7
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3
replies
9.6k
views
Default password for Bio-Linux 8
bio-linux password
updated 7.5 years ago by • 0 • written 8.8 years ago by ★ 2.9k
0
votes
0
replies
2.0k
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Comment: C: Learning some Drop-Seq as a first approach to RNA-Seq while on vacation
7.5 years ago by Anima Mundi ★ 2.9k
1
vote
2
replies
2.0k
views
Learning some Drop-Seq as a first approach to RNA-Seq while on vacation
hardware RNA-Seq drop-seq
updated 21 months ago by 44k • written 7.5 years ago by ★ 2.9k
1
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0
replies
167k
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Comment: C: The Biostar Handbook, a bioinformatics e-book for beginners
8.2 years ago by Anima Mundi ★ 2.9k
0
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0
replies
2.4k
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Comment: C: Shortcuts for retrieving information on specific genomic loci from big SRA files
8.5 years ago by Anima Mundi ★ 2.9k
1
vote
2
replies
2.4k
views
Shortcuts for retrieving information on specific genomic loci from big SRA files
tophat RNA-Seq bowtie sra
updated 2.1 years ago by 44k • written 9.7 years ago by ★ 2.9k
0
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1
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5.8k
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Comment: C: Detecting bacterial TSS from RNA-Seq data, how?
8.5 years ago by Anima Mundi ★ 2.9k
0
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1
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5.8k
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Comment: C: Detecting bacterial TSS from RNA-Seq data, how?
8.5 years ago by Anima Mundi ★ 2.9k
0
votes
0
replies
1.9k
views
Comment: C: MutMap installation in Linux
8.6 years ago by Anima Mundi ★ 2.9k
1
vote
0
replies
4.1k
views
Comment: C: Retrieving gene names from list of mRNA accession IDs
8.7 years ago by Anima Mundi ★ 2.9k
323 results • Page 1 of 7
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