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DEG analysis by limma
limma
updated 2.9 years ago by 45k • written 8.9 years ago by ▴ 220
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0
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15k
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Comment: C: Error in (function (classes, fdef, mtable): unable to find an inherited method f
updated 5.8 years ago by 45k • written 10.4 years ago by ▴ 220
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1
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11k
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Comment: A: How To Merge Two Microarrays Datasets?
updated 5.9 years ago by 45k • written 10.6 years ago by ▴ 220
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0
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2.2k
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Comment: C: I'm looking for a filtering method that it does't use genewise variances
updated 5.9 years ago by 45k • written 9.9 years ago by ▴ 220
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2.6k
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Answer: A: Microarray data : filtring genes with 2 fold above the control
updated 5.9 years ago by 45k • written 9.9 years ago by ▴ 220
1
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0
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4.6k
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Answer: A: High School Researcher: Is it possible to gain access to publicly available whol
updated 6.0 years ago by 45k • written 10.1 years ago by ▴ 220
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2
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7.6k
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Comment: Comment: sorting my data based on p-value
updated 3.1 years ago by 45k • written 10.2 years ago by ▴ 220
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1
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3.2k
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Answer: A: Tools for finding tissue specific gene expression "markers"?
6.2 years ago by Shamim Sarhadi ▴ 220
3
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2
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1.8k
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Binary mutation data format
Mutation data TCGA DawnRank R
updated 6.6 years ago by 13k • written 6.6 years ago by ▴ 220
3
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3
replies
1.7k
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Estimating the purity of tumor cells in gene expression microarray data
Microarray cell purity
7.2 years ago by Shamim Sarhadi ▴ 220
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2
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1.4k
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Longitudinal breast cancer data
Database Longitudinal data Genome tarnscriptome
7.3 years ago by Shamim Sarhadi ▴ 220
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0
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2.1k
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Answer: A: How to optimize the homology modeling?
7.4 years ago by Shamim Sarhadi ▴ 220
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1
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2.0k
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Comment: C: Gene expression study
7.7 years ago by Shamim Sarhadi ▴ 220
4
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5
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7.4k
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Cut-off for genesets in GSEA
GSEA
updated 8.0 years ago by ★ 1.0k • written 8.0 years ago by ▴ 220
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0
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7.4k
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Comment: A: Cut-off for genesets in GSEA
8.0 years ago by Shamim Sarhadi ▴ 220
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1
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7.4k
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Comment: C: Cut-off for genesets in GSEA
8.0 years ago by Shamim Sarhadi ▴ 220
2
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1
reply
2.6k
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Gene set enrichment analysis
GSEA enrichment analysis DEG analysis
8.0 years ago by Shamim Sarhadi ▴ 220
30
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8
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15k
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Reporting p.value for my PCA results
PCA gene expression
updated 8.0 years ago by 89k • written 8.0 years ago by ▴ 220
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0
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2.5k
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Comment: C: gene expression data analysis and batch effect methods
8.5 years ago by Shamim Sarhadi ▴ 220
1
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3
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2.5k
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gene expression data analysis and batch effect methods
microarray Gene-expression batch-effect
updated 18 months ago by 45k • written 8.5 years ago by ▴ 220
5
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11
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4.7k
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The number of cluster in Kmean clustering
statistics
updated 8.8 years ago by 4.2k • written 9.4 years ago by ▴ 220
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0
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1.9k
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Comment: C: Looking for a Transcriptome meta-analysis algorithm
8.9 years ago by Shamim Sarhadi ▴ 220
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1
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3.7k
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Comment: C: A question about adjust-pvalue in gene expression analysis
9.1 years ago by Shamim Sarhadi ▴ 220
1
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4
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3.7k
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A question about adjust-pvalue in gene expression analysis
Gene expression analysis meta-analysis statistics
9.1 years ago by Shamim Sarhadi ▴ 220
1
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1
reply
1.9k
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Protein modelling with modeller
proteing modeling modeller
9.3 years ago by Shamim Sarhadi ▴ 220
0
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1
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1.9k
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CEL file to expressionSet
Affy CEl Expressionset
9.4 years ago by Shamim Sarhadi ▴ 220
0
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1
reply
1.5k
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Which one of protein modeling programs is better?
protein modelling
9.4 years ago by Shamim Sarhadi ▴ 220
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0
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4.5k
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Comment: C: Retrieving gene names from list of mRNA accession IDs
9.4 years ago by Shamim Sarhadi ▴ 220
0
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0
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4.2k
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Comment: C: Importance of Array Quality Control - arrayQualityMetrics (PART I)
9.4 years ago by Shamim Sarhadi ▴ 220
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0
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2.7k
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Comment: C: Analysing gene expression across clinical parameters
9.4 years ago by Shamim Sarhadi ▴ 220
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0
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4.7k
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Comment: C: The number of cluster in Kmean clustering
9.4 years ago by Shamim Sarhadi ▴ 220
0
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0
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4.7k
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Comment: C: The number of cluster in Kmean clustering
9.4 years ago by Shamim Sarhadi ▴ 220
0
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1
reply
4.7k
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Comment: C: The number of cluster in Kmean clustering
9.4 years ago by Shamim Sarhadi ▴ 220
0
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2
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4.7k
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Comment: C: The number of cluster in Kmean clustering
9.4 years ago by Shamim Sarhadi ▴ 220
1
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1
reply
8.3k
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Comment: C: creating sub-network from a gene list in cytoscape
9.4 years ago by Shamim Sarhadi ▴ 220
1
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1
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8.3k
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Comment: C: creating sub-network from a gene list in cytoscape
9.4 years ago by Shamim Sarhadi ▴ 220
1
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1
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8.3k
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Comment: C: creating sub-network from a gene list in cytoscape
9.4 years ago by Shamim Sarhadi ▴ 220
2
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0
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2.3k
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Comment: C: getting gene functions for a group of genes
9.4 years ago by Shamim Sarhadi ▴ 220
0
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0
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2.6k
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Comment: C: network analysis of DEGs
9.4 years ago by Shamim Sarhadi ▴ 220
0
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2
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2.6k
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network analysis of DEGs
network analysis module finder DEG
9.4 years ago by Shamim Sarhadi ▴ 220
1
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1
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4.4k
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Comment: C: Error in R Script
9.4 years ago by Shamim Sarhadi ▴ 220
0
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0
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4.4k
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Comment: C: Error in R Script
9.4 years ago by Shamim Sarhadi ▴ 220
1
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0
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4.3k
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Comment: C: normalizing CEL files from Affymetrix Human Genome U133 Plus 2.0 Array and Affym
9.4 years ago by Shamim Sarhadi ▴ 220
3
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9
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8.7k
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Error in `[.data.frame`(pData(eset), , symLabel) : undefined columns selected
R
updated 2.8 years ago by 45k • written 10.4 years ago by ▴ 220
0
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1
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8.7k
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Answer: A: Error in `[.data.frame`(pData(eset), , symLabel) : undefined columns selected
9.5 years ago by Shamim Sarhadi ▴ 220
1
vote
1
reply
8.7k
views
Comment: Comment: Error in `[.data.frame`(pData(eset), , symLabel) : undefined columns selected
updated 2.8 years ago by 45k • written 9.5 years ago by ▴ 220
0
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0
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3.1k
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Comment: C: how can i convert my gene list to a format that reactome recognises?
9.5 years ago by Shamim Sarhadi ▴ 220
0
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1
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3.1k
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Comment: C: how can i convert my gene list to a format that reactome recognises?
9.5 years ago by Shamim Sarhadi ▴ 220
0
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0
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3.9k
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Answer: A: Error of Memory Size in R
9.5 years ago by Shamim Sarhadi ▴ 220
0
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3
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2.5k
views
access to dataset in insilicodb
R
updated 2.8 years ago by 45k • written 10.5 years ago by ▴ 220
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