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16
votes
11
replies
3.9k
views
6 follow
Splitting VCF file to decrease file size to run it on VEP and wANNOVAR
vcf
written 4.5 years ago by ▴ 80
0
votes
0
replies
450
views
How to add coverage plots of 6 samples in Covid viral genome using circos like R packages
R genomic data visualization
2.1 years ago by S AR ▴ 80
0
votes
0
replies
760
views
Comment: C: Splitting a semi colon value in new line and copying its neighboring cell values
2.4 years ago by S AR ▴ 80
5
votes
4
replies
760
views
Splitting a semi colon value in new line and copying its neighboring cell values
unix awk python excel
2.4 years ago by S AR ▴ 80
7
votes
11
replies
13k
views
TypeError: 'str' object is not callable
python
updated 2.9 years ago by ▴ 10 • written 4.4 years ago by ▴ 80
0
votes
3
replies
961
views
Making pattern of GT:AD:DP:PL column values to be replaced by o and 1.
Grep linux python vcf machineLearning
updated 3.1 years ago by 84k • written 3.2 years ago by ▴ 80
0
votes
0
replies
961
views
Comment: C: Making pattern of GT:AD:DP:PL column values to be replaced by o and 1.
3.1 years ago by S AR ▴ 80
1
vote
1
reply
4.7k
views
Comment: A: Genemark-Es Gtf Output Conversion To Mod
updated 3.3 years ago by 38k • written 6.0 years ago by ▴ 80
0
votes
0
replies
1.7k
views
Annotating Mycobacterium tuberculosis VCF file using snpEFF and aNNOVAR
SNP annotation snpEff Annovar MTB
4.2 years ago by S AR ▴ 80
0
votes
4
replies
5.0k
views
How to combine a multi sample VCF from multiple sample VCF and interpret a multi sample vcf of bacterial genome?
GATK VCF Variant calling
updated 4.2 years ago by 153k • written 4.2 years ago by ▴ 80
0
votes
0
replies
5.0k
views
Comment: C: How to combine a multi sample VCF from multiple sample VCF and interpret a multi
4.2 years ago by S AR ▴ 80
0
votes
0
replies
2.1k
views
Comment: C: How to merge/combine multiple vcf from different samples to make one multi sampl
4.2 years ago by S AR ▴ 80
6
votes
2
replies
2.1k
views
How to merge/combine multiple vcf from different samples to make one multi sample vcf file using GATK
GATK loop scripting
updated 4.2 years ago by 153k • written 4.2 years ago by ▴ 80
2
votes
9
replies
1.2k
views
Getting unusual characters while generating output files in a bash script
sh bash linux unix
4.3 years ago by S AR ▴ 80
0
votes
0
replies
1.2k
views
Answer: A: Getting unusual characters while generating output files in a bash script
4.3 years ago by S AR ▴ 80
0
votes
0
replies
1.2k
views
Comment: C: Getting unusual characters while generating output files in a bash script
4.3 years ago by S AR ▴ 80
0
votes
2
replies
1.2k
views
Comment: C: Getting unusual characters while generating output files in a bash script
4.3 years ago by S AR ▴ 80
0
votes
0
replies
1.2k
views
Comment: C: Getting unusual characters while generating output files in a bash script
4.3 years ago by S AR ▴ 80
0
votes
0
replies
1.3k
views
Comment: A: How to separate a strain of MTB drug wise?
4.3 years ago by S AR ▴ 80
5
votes
7
replies
1.3k
views
How to separate a strain of MTB drug wise?
Grep Python sed awk loop
4.3 years ago by S AR ▴ 80
0
votes
1
reply
1.3k
views
Comment: C: How to separate a strain of MTB drug wise?
4.3 years ago by S AR ▴ 80
0
votes
0
replies
2.8k
views
Comment: C: is there a way to get SRA info (Paired Library, Sample id, Seq Tech... etc) usin
4.3 years ago by S AR ▴ 80
0
votes
0
replies
2.8k
views
Comment: C: is there a way to get SRA info (Paired Library, Sample id, Seq Tech... etc) usin
4.3 years ago by S AR ▴ 80
0
votes
0
replies
2.8k
views
Comment: C: is there a way to get SRA info (Paired Library, Sample id, Seq Tech... etc) usin
4.3 years ago by S AR ▴ 80
0
votes
0
replies
9.0k
views
Comment: C: SRA files bulk downloads
4.3 years ago by S AR ▴ 80
0
votes
0
replies
2.8k
views
Comment: C: is there a way to get SRA info (Paired Library, Sample id, Seq Tech... etc) usin
4.3 years ago by S AR ▴ 80
4
votes
6
replies
2.8k
views
is there a way to get SRA info (Paired Library, Sample id, Seq Tech... etc) using a list of SRA IDS?
sra awk
4.3 years ago by S AR ▴ 80
0
votes
0
replies
12k
views
Comment: C: download from SRA
4.4 years ago by S AR ▴ 80
0
votes
1
reply
9.0k
views
Comment: C: SRA files bulk downloads
4.4 years ago by S AR ▴ 80
0
votes
1
reply
9.0k
views
Comment: C: SRA files bulk downloads
4.4 years ago by S AR ▴ 80
9
votes
14
replies
9.0k
views
SRA files bulk downloads
aspera wget recursive awk linux
4.4 years ago by S AR ▴ 80
0
votes
1
reply
9.0k
views
Answer: A: SRA files bulk downloads
4.4 years ago by S AR ▴ 80
0
votes
0
replies
9.0k
views
Comment: C: SRA files bulk downloads
4.4 years ago by S AR ▴ 80
0
votes
0
replies
1.1k
views
Ximmer running error
CNV XIMMER JAVA python R
4.4 years ago by S AR ▴ 80
0
votes
1
reply
9.0k
views
Comment: C: SRA files bulk downloads
4.4 years ago by S AR ▴ 80
0
votes
0
replies
1.8k
views
Comment: C: How to get the gene name with the array as headings in numpy-python?
4.4 years ago by S AR ▴ 80
0
votes
1
reply
1.8k
views
Comment: C: How to get the gene name with the array as headings in numpy-python?
4.4 years ago by S AR ▴ 80
0
votes
0
replies
1.8k
views
Comment: C: How to get the gene name with the array as headings in numpy-python?
4.4 years ago by S AR ▴ 80
0
votes
2
replies
1.8k
views
Comment: C: How to get the gene name with the array as headings in numpy-python?
4.4 years ago by S AR ▴ 80
5
votes
9
replies
1.8k
views
How to get the gene name with the array as headings in numpy-python?
numpy python array
updated 4.4 years ago by 5.2k • written 4.4 years ago by ▴ 80
0
votes
0
replies
2.6k
views
Comment: C: Extracting snps from a range of coordinates
4.4 years ago by S AR ▴ 80
0
votes
0
replies
1.3k
views
Comment: C: How to separate a strain of MTB drug wise?
4.4 years ago by S AR ▴ 80
0
votes
0
replies
13k
views
Comment: C: TypeError: 'str' object is not callable
4.4 years ago by S AR ▴ 80
0
votes
1
reply
1.3k
views
Comment: C: How to separate a strain of MTB drug wise?
4.4 years ago by S AR ▴ 80
0
votes
1
reply
13k
views
Comment: C: TypeError: 'str' object is not callable
4.4 years ago by S AR ▴ 80
0
votes
1
reply
13k
views
Comment: C: TypeError: 'str' object is not callable
4.4 years ago by S AR ▴ 80
0
votes
0
replies
13k
views
Comment: C: TypeError: 'str' object is not callable
4.4 years ago by S AR ▴ 80
0
votes
0
replies
2.6k
views
Comment: C: Extracting snps from a range of coordinates
4.4 years ago by S AR ▴ 80
0
votes
1
reply
2.6k
views
Comment: C: Extracting snps from a range of coordinates
4.5 years ago by S AR ▴ 80
0
votes
1
reply
4.2k
views
Comment: A: Viewing CNV read depth data along multiple chromosomes in a single plot via R
4.5 years ago by S AR ▴ 80
58 results • Page 1 of 2
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