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0
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0
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737
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Comment: Comment: VarDict in paired end mode with GATK preprocessing
22 months ago by kulvait ▴ 270
0
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2
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737
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VarDict in paired end mode with GATK preprocessing
vardict exomeseq variant discovery
22 months ago by kulvait ▴ 270
18
votes
7
replies
12k
views
Determine sex from vcf file (or sequencing data)
variant genotyping vcf
updated 2.6 years ago by ▴ 130 • written 8.5 years ago by ▴ 270
3
votes
8
replies
2.6k
views
For bam and mutation signature I need coverage and number of observations
next-gen vcf bam
updated 7.2 years ago by 21k • written 8.0 years ago by ▴ 270
3
votes
2
replies
1.5k
views
Strip primer sequences from sequencing reads
DNA-seq amplicon-seq BAM
updated 7.2 years ago by ▴ 630 • written 7.2 years ago by ▴ 270
0
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1
reply
2.2k
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Comment: C: Finding sample swaps using VCF files
7.2 years ago by kulvait ▴ 270
2
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4
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2.2k
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Finding sample swaps using VCF files
dna-seq amplicon-seq vcf
7.2 years ago by kulvait ▴ 270
0
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0
replies
1.9k
views
Comment: C: Weird alignments in amplicon sequencing
8.0 years ago by kulvait ▴ 270
1
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0
replies
2.6k
views
Comment: C: For bam and mutation signature I need coverage and number of observations
8.0 years ago by kulvait ▴ 270
0
votes
1
reply
2.6k
views
Comment: C: For bam and mutation signature I need coverage and number of observations
8.0 years ago by kulvait ▴ 270
0
votes
2
replies
2.6k
views
Comment: A: For bam and mutation signature I need coverage and number of observations
8.0 years ago by kulvait ▴ 270
0
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0
replies
2.6k
views
Comment: C: IndelRealigner and RealignerTargetCreator for amplicon sequencing
8.0 years ago by kulvait ▴ 270
0
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0
replies
2.6k
views
Comment: C: IndelRealigner and RealignerTargetCreator for amplicon sequencing
8.0 years ago by kulvait ▴ 270
3
votes
4
replies
2.6k
views
IndelRealigner and RealignerTargetCreator for amplicon sequencing
amplicon-seq NGS indel
updated 8.0 years ago by 47k • written 8.0 years ago by ▴ 270
0
votes
2
replies
1.9k
views
Weird alignments in amplicon sequencing
amplicon-seq sequencing myeloid
8.1 years ago by kulvait ▴ 270
0
votes
0
replies
6.4k
views
Comment: C: samtools v1.3: AD, ADF and ADR fields
8.5 years ago by kulvait ▴ 270
2
votes
1
reply
2.4k
views
Answer: A: Does the order of the RMA algorithm make a difference in results?
8.5 years ago by kulvait ▴ 270
0
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1
reply
2.1k
views
Comment: C: Genome assembly process
8.5 years ago by kulvait ▴ 270
6
votes
0
replies
12k
views
Answer: A: Determine sex from vcf file (or sequencing data)
8.5 years ago by kulvait ▴ 270
3
votes
0
replies
12k
views
Answer: A: Determine sex from vcf file (or sequencing data)
8.5 years ago by kulvait ▴ 270
1
vote
9
replies
2.1k
views
Genome assembly process
DNA
updated 8.5 years ago by 33k • written 8.5 years ago by ▴ 270
0
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0
replies
2.1k
views
Comment: C: Genome assembly process
8.5 years ago by kulvait ▴ 270
0
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0
replies
12k
views
Comment: C: Determine sex from vcf file (or sequencing data)
8.5 years ago by kulvait ▴ 270
0
votes
0
replies
4.2k
views
Comment: C: Remove duplicates from exome sequencing data
8.5 years ago by kulvait ▴ 270
2
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1
reply
4.2k
views
Answer: A: Remove duplicates from exome sequencing data
8.5 years ago by kulvait ▴ 270
9
votes
9
replies
4.2k
views
Remove duplicates from exome sequencing data
variants sequencing exome-seq
8.5 years ago by kulvait ▴ 270
1
vote
1
reply
4.2k
views
Comment: C: Remove duplicates from exome sequencing data
8.5 years ago by kulvait ▴ 270
9
votes
9
replies
2.5k
views
How to parse info field in Excel
sequencing
updated 8.6 years ago by ★ 3.2k • written 8.6 years ago by ▴ 270
0
votes
1
reply
2.5k
views
Comment: C: How to parse info field in Excel
8.6 years ago by kulvait ▴ 270
0
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1
reply
2.5k
views
Comment: C: How to parse info field in Excel
8.6 years ago by kulvait ▴ 270
0
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0
replies
1.7k
views
SnpEff protein_protein_contact annotation
SNP ngs
8.7 years ago by kulvait ▴ 270
0
votes
0
replies
8.3k
views
Answer: A: Variant caller for low frequency variants
8.7 years ago by kulvait ▴ 270
1
vote
6
replies
6.2k
views
Filtering bam files generated by bwa mem
next-gen sequencing SNP
8.7 years ago by kulvait ▴ 270
0
votes
0
replies
6.2k
views
Answer: A: Filtering bam files generated by bwa mem
8.7 years ago by kulvait ▴ 270
9
votes
7
replies
8.3k
views
Variant caller for low frequency variants
NGS
8.7 years ago by kulvait ▴ 270
0
votes
0
replies
6.2k
views
Comment: C: Filtering bam files generated by bwa mem
8.7 years ago by kulvait ▴ 270
0
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0
replies
9.4k
views
Answer: Answer: bcftools: invalid option -- b was showed error
updated 2.7 years ago by 44k • written 8.7 years ago by ▴ 270
0
votes
1
reply
8.3k
views
Comment: A: Variant caller for low frequency variants
8.7 years ago by kulvait ▴ 270
1
vote
0
replies
3.8k
views
Answer: A: How Could I Handle Bed Files In Java?
updated 9.5 years ago by 5.1k • written 9.5 years ago by ▴ 270
2
votes
1
reply
1.6k
views
Dealing with sequencing data annotations
sequencing annotation
updated 2.3 years ago by 44k • written 9.6 years ago by ▴ 270
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