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Comment: C: What preprocessing steps are required for the different TCGA/GDC Gene Expression
8.1 years ago by Lila M ★ 1.3k
1
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0
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4.0k
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Comment: C: Tool to analysis GO term enrichment in C. elegans
8.1 years ago by Lila M ★ 1.3k
0
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0
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2.0k
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Comment: C: chipseq, how to create the density plot with real length of gene
8.1 years ago by Lila M ★ 1.3k
0
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1
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3.5k
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Answer: A: Merging BAM file before running GATK or merging vcf output
8.1 years ago by Lila M ★ 1.3k
0
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1
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3.4k
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Comment: C: RNA-seq experimental design for SNP calling
8.1 years ago by Lila M ★ 1.3k
1
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1
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3.4k
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Answer: A: RNA-seq experimental design for SNP calling
8.1 years ago by Lila M ★ 1.3k
1
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1
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4.8k
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Comment: C: how to calculate the coverage over a specif coordinate
8.1 years ago by Lila M ★ 1.3k
5
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3
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4.8k
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how to calculate the coverage over a specif coordinate
RNA-Seq coverage exon
8.1 years ago by Lila M ★ 1.3k
0
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0
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1.9k
views
Answer: A: snp detection for RNA SEQ
8.2 years ago by Lila M ★ 1.3k
0
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0
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4.4k
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Comment: C: How can I check the direction of DNA replication?
8.2 years ago by Lila M ★ 1.3k
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0
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4.4k
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Answer: A: How can I check the direction of DNA replication?
8.2 years ago by Lila M ★ 1.3k
5
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9
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4.4k
views
How can I check the direction of DNA replication?
replication origin transcription
8.2 years ago by Lila M ★ 1.3k
0
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2
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4.4k
views
Comment: C: How can I check the direction of DNA replication?
8.2 years ago by Lila M ★ 1.3k
6
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10
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3.8k
views
how to calling variants in RNAseq data from multiple samples?
RNA-Seq GATK VC variant calling
updated 8.2 years ago by ▴ 330 • written 8.2 years ago by ★ 1.3k
0
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0
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3.8k
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Comment: C: how to calling variants in RNAseq data from multiple samples?
8.2 years ago by Lila M ★ 1.3k
0
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1
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3.8k
views
Comment: C: how to calling variants in RNAseq data from multiple samples?
8.2 years ago by Lila M ★ 1.3k
0
votes
1
reply
3.8k
views
Comment: C: how to calling variants in RNAseq data from multiple samples?
8.2 years ago by Lila M ★ 1.3k
0
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1
reply
3.8k
views
Comment: C: how to calling variants in RNAseq data from multiple samples?
8.2 years ago by Lila M ★ 1.3k
0
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0
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2.0k
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Comment: C: How to check if specific mutations are or not enriched in a RNAseq data seq?
8.2 years ago by Lila M ★ 1.3k
0
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1
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2.0k
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Comment: C: How to check if specific mutations are or not enriched in a RNAseq data seq?
8.2 years ago by Lila M ★ 1.3k
4
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7
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2.0k
views
How to check if specific mutations are or not enriched in a RNAseq data seq?
RNA-Seq enriched mutation
updated 8.2 years ago by 103k • written 8.2 years ago by ★ 1.3k
0
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0
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2.0k
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Comment: C: How to check if specific mutations are or not enriched in a RNAseq data seq?
8.2 years ago by Lila M ★ 1.3k
0
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0
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2.2k
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Comment: C: Is the heatmap matruix from vst expressed in fold change?
8.2 years ago by Lila M ★ 1.3k
2
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2
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2.2k
views
Is the heatmap matruix from vst expressed in fold change?
RNA-Seq pheatmap heatmap vsd fold change
updated 8.2 years ago by 105k • written 8.2 years ago by ★ 1.3k
0
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2
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1.5k
views
dexseq_count.py: strandness of data from portal.gdc.cancer.gov
DEXseq dexseq_count TCGA
updated 8.2 years ago by 103k • written 8.2 years ago by ★ 1.3k
1
vote
4
replies
4.1k
views
differential exon usage
RNA-Seq exon bam
updated 8.3 years ago by ★ 4.2k • written 8.4 years ago by ★ 1.3k
0
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0
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1.6k
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Comment: C: how to analyze the distribution over each gene in different conditions?
8.3 years ago by Lila M ★ 1.3k
0
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1
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1.6k
views
Comment: C: how to analyze the distribution over each gene in different conditions?
8.3 years ago by Lila M ★ 1.3k
0
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4
replies
1.6k
views
how to analyze the distribution over each gene in different conditions?
RNA-Seq coverage gene
8.3 years ago by Lila M ★ 1.3k
1
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1
reply
2.8k
views
how to calculate coverage in bam file over a specific bed file
RNA-Seq exon coverage multicov bedtools
updated 8.3 years ago by 105k • written 8.3 years ago by ★ 1.3k
0
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0
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2.3k
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Comment: C: phylonet input tree with bootstrap
8.3 years ago by Lila M ★ 1.3k
1
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0
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6.4k
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Answer: A: Software for Tree Visualization
8.3 years ago by Lila M ★ 1.3k
2
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5
replies
1.9k
views
coverage for unique transcript and df process
R data frame coverage
updated 8.3 years ago by ▴ 480 • written 8.3 years ago by ★ 1.3k
0
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0
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1.9k
views
Comment: C: coverage for unique transcript and df process
8.3 years ago by Lila M ★ 1.3k
0
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1
reply
1.9k
views
Comment: C: coverage for unique transcript and df process
8.3 years ago by Lila M ★ 1.3k
0
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1
reply
8.1k
views
Comment: C: DESeq2: Find differentially expressed genes specific to one condition
8.3 years ago by Lila M ★ 1.3k
0
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0
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6.4k
views
Comment: C: problems installing HTSeq
8.4 years ago by Lila M ★ 1.3k
0
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1
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4.1k
views
Comment: C: differential exon usage
8.4 years ago by Lila M ★ 1.3k
0
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0
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205k
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Comment: C: The Biostar Handbook. A bioinformatics e-book for beginners.
8.5 years ago by Lila M ★ 1.3k
1
vote
7
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4.0k
views
compare peaks in a gene list (coordinates)
ChIP-Seq peaks gene bed
updated 8.5 years ago by ★ 5.2k • written 8.5 years ago by ★ 1.3k
0
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2
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4.0k
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Comment: C: compare peaks in a gene list (coordinates)
8.5 years ago by Lila M ★ 1.3k
0
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0
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3.2k
views
Comment: C: CpG islands density calculation
8.5 years ago by Lila M ★ 1.3k
1
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2
replies
3.2k
views
CpG islands density calculation
RNA-Seq CpG promoters
8.5 years ago by Lila M ★ 1.3k
1
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0
replies
5.4k
views
Comment: C: how to identify TATA box in a gene list
8.5 years ago by Lila M ★ 1.3k
3
votes
18
replies
5.4k
views
how to identify TATA box in a gene list
TATA homer gene
updated 2.3 years ago by 45k • written 8.5 years ago by ★ 1.3k
0
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0
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5.4k
views
Comment: C: how to identify TATA box in a gene list
8.5 years ago by Lila M ★ 1.3k
0
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1
reply
5.4k
views
Comment: C: how to identify TATA box in a gene list
8.5 years ago by Lila M ★ 1.3k
0
votes
1
reply
5.4k
views
Comment: C: how to identify TATA box in a gene list
8.5 years ago by Lila M ★ 1.3k
0
votes
1
reply
5.4k
views
Comment: C: how to identify TATA box in a gene list
8.5 years ago by Lila M ★ 1.3k
0
votes
1
reply
5.4k
views
Comment: C: how to identify TATA box in a gene list
8.5 years ago by Lila M ★ 1.3k
455 results • Page 7 of 10
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