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Comment: Comment: Shell scripts and grep, awk command
2.9 years ago by boaty ▴ 220
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Any idea about extracting bacteria related proteins(or protein clusters) from uniref90 database?
uniref uniProt
updated 3.6 years ago by ▴ 20 • written 4.1 years ago by ▴ 220
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Comment: Comment: Popular viral Metagenomics data analysis tool in 2022?
3.6 years ago by boaty ▴ 220
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Comment: Comment: Popular viral Metagenomics data analysis tool in 2022?
3.6 years ago by boaty ▴ 220
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Answer: Answer: MetaPhlAn 3.0
3.6 years ago by boaty ▴ 220
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3
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1.8k
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Popular viral Metagenomics data analysis tool in 2022?
virus gut microbe Metagenome
3.6 years ago by boaty ▴ 220
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Comment: Comment: More results when prefiltering in DESeq2
4.1 years ago by boaty ▴ 220
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Comment: Comment: Any idea about extracting bacteria related proteins(or protein clusters) from un
4.1 years ago by boaty ▴ 220
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2.8k
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Comment: Comment: Any idea about extracting bacteria related proteins(or protein clusters) from un
4.1 years ago by boaty ▴ 220
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0
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2.0k
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Comment: Comment: ATACseq batch effect coupled with biological effect
4.4 years ago by boaty ▴ 220
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Comment: Comment: ATACseq batch effect coupled with biological effect
4.4 years ago by boaty ▴ 220
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2
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Comment: Comment: Using R in Conda
4.4 years ago by boaty ▴ 220
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Answer: Answer: Tool to run statistics on a list of genes and output associated conditions/pheno
4.4 years ago by boaty ▴ 220
3
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834
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Looking for a tool for metadata management
management relational metadata database
4.4 years ago by boaty ▴ 220
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2.9k
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Answer: Answer: Filtering out non-bacterial genomes from metagenomic data
4.4 years ago by boaty ▴ 220
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Comment: C: Better way for speedup of Humann3 metagenomics analysis pipeline?
4.7 years ago by boaty ▴ 220
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2
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4.6k
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Better way for speedup of Humann3 metagenomics analysis pipeline?
alignment metagenomics humann pipeline
updated 4.7 years ago by ★ 1.4k • written 5.3 years ago by ▴ 220
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1.1k
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Comment: C: tool to convert cytokine name for pathway enrichment?
5.2 years ago by boaty ▴ 220
1
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2
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1.1k
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tool to convert cytokine name for pathway enrichment?
cytokine
5.2 years ago by boaty ▴ 220
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0
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1.0k
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is it possible to get a .jplace file from a phyloseq obj?
tree phyloseq pplacer taxtastic phyml
5.5 years ago by boaty ▴ 220
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0
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1.9k
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Answer: A: htseq count error
5.6 years ago by boaty ▴ 220
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1
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1.3k
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Comment: C: best R package for tree(data structure) in 2020?
5.6 years ago by boaty ▴ 220
3
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3
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1.3k
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best R package for tree(data structure) in 2020?
R tree pacakge
updated 5.6 years ago by 89k • written 5.6 years ago by ▴ 220
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1
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1.9k
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Comment: C: htseq coun error
5.6 years ago by boaty ▴ 220
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Comment: C: is there a method like PLS-DA, but for a quantitative Y value?
5.6 years ago by boaty ▴ 220
3
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2
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1.2k
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is there a method like PLS-DA, but for a quantitative Y value?
PLS PLS-DA
updated 5.6 years ago by 89k • written 5.6 years ago by ▴ 220
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0
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2.6k
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Answer: A: How to split sequence in fasta file based on long runs of Ns?
5.6 years ago by boaty ▴ 220
1
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1
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5.2k
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Comment: C: How to make differential expression analysis with normalized data?
6.1 years ago by boaty ▴ 220
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1
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5.2k
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Comment: C: How to make differential expression analysis with normalized data?
6.1 years ago by boaty ▴ 220
2
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3.7k
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Answer: A: Why I have too many reads non uniquely aligned?
6.1 years ago by boaty ▴ 220
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2.0k
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Comment: C: concern about statistical model after more than 78% of genes are differentially
6.2 years ago by boaty ▴ 220
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2.0k
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Comment: C: concern about statistical model after more than 78% of genes are differentially
6.2 years ago by boaty ▴ 220
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9
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2.0k
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concern about statistical model after more than 78% of genes are differentially expressed according to DESeq2?
deseq2 rnaseq
6.2 years ago by boaty ▴ 220
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2.0k
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Comment: C: concern about statistical model after more than 78% of genes are differentially
6.2 years ago by boaty ▴ 220
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2.0k
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Comment: C: What to do if more than 78% of genes are differentially expressed according to D
6.2 years ago by boaty ▴ 220
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2.0k
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Comment: C: What to do if more than 78% of genes are differentially expressed according to D
6.2 years ago by boaty ▴ 220
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2.1k
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Comment: C: any idea about histogram(graphic) clustering?
6.3 years ago by boaty ▴ 220
4
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7
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2.1k
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any idea about histogram(graphic) clustering?
RNA-Seq transcript coverage
updated 6.3 years ago by 27k • written 6.3 years ago by ▴ 220
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0
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2.1k
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Comment: C: any idea about histogram(graphic) clustering?
6.3 years ago by boaty ▴ 220
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0
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2.1k
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Comment: C: any idea about histogram(graphic) clustering?
6.3 years ago by boaty ▴ 220
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0
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4.7k
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Comment: C: Count amino acid in protein sequence in R
6.6 years ago by boaty ▴ 220
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4.7k
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Comment: C: Count amino acid in protein sequence in R
6.6 years ago by boaty ▴ 220
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0
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4.7k
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Comment: C: Count amino acid in protein sequence in R
6.6 years ago by boaty ▴ 220
9
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8
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4.7k
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Count amino acid in protein sequence in R
protein count R
updated 6.6 years ago by 12k • written 6.6 years ago by ▴ 220
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4.7k
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Comment: C: count amino acid in protein sequence in R
6.6 years ago by boaty ▴ 220
2
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1
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2.1k
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why polyQ are not part of intrisicaly disordered region (IDR) in disopred3 prediction?
protein disopred psipred idr prediction
6.7 years ago by boaty ▴ 220
5
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3
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1.9k
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guidance for communication online seach engine with python or R script?
python RNA-Seq online search engine repeatMasker
6.9 years ago by boaty ▴ 220
3
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0
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1.9k
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Answer: A: guidance for communication online seach engine with python or R script?
6.9 years ago by boaty ▴ 220
1
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0
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1.9k
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Comment: C: guidance for communication online seach engine with python or R script?
7.5 years ago by boaty ▴ 220
1
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0
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3.9k
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Comment: C: is it meaningless for comparing averages from data with different sample size?
7.6 years ago by boaty ▴ 220
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