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Comment: Comment: RNA-seq: Sequencing data has two coverages
3.9 years ago by Buffo ★ 2.4k
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1
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1.3k
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Comment: Comment: exceRpt miRNA pipeline for paired-end RNA-seq data
4.0 years ago by Buffo ★ 2.4k
1
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0
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1.1k
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Answer: Answer: Circos plot of dominant OTU with phylogenetic tree
4.0 years ago by Buffo ★ 2.4k
1
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0
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3.2k
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Comment: Comment: Which files from PacBio output files to use in downstream analysis in R
4.0 years ago by Buffo ★ 2.4k
0
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1
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2.4k
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Comment: Comment: Is it possible to isolate and merge overlapping hits from a BLAST search Aligned
4.0 years ago by Buffo ★ 2.4k
1
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0
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1.3k
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Comment: Comment: How to add metadata to dendrogram of hierarchical clustering in R
4.0 years ago by Buffo ★ 2.4k
0
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0
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1.0k
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IPD values from ipdsummary, methylation analysis using PacBio
methylation DNAsequencing IPD m4C m6A
4.0 years ago by Buffo ★ 2.4k
0
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0
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666
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Splitting predicted transcripts according to ORF coordinates
transcript ORF RNAseq
4.2 years ago by Buffo ★ 2.4k
1
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1
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1.3k
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Comment: Comment: Heatmap from the coverage
4.3 years ago by Buffo ★ 2.4k
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0
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1.6k
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Comment: Comment: STAR alignment issue
4.3 years ago by Buffo ★ 2.4k
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0
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2.9k
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Comment: Comment: How to quantify piRNAs ?
4.3 years ago by Buffo ★ 2.4k
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1
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1.6k
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Comment: Comment: STAR alignment issue
4.3 years ago by Buffo ★ 2.4k
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1
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1.6k
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Comment: Comment: STAR alignment issue
4.3 years ago by Buffo ★ 2.4k
0
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0
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2.9k
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Comment: Comment: How to quantify piRNAs ?
4.4 years ago by Buffo ★ 2.4k
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2.7k
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Comment: Comment: How to visualise differential expression analysis
4.4 years ago by Buffo ★ 2.4k
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0
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6.4k
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Comment: Comment: Visualizing VCF file on IGV
4.5 years ago by Buffo ★ 2.4k
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1
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6.4k
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Comment: Comment: Visualizing VCF file on IGV
4.5 years ago by Buffo ★ 2.4k
2
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4
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6.4k
views
Visualizing VCF file on IGV
BCFTOOLS VCF IGV
updated 4.5 years ago by 153k • written 4.5 years ago by ★ 2.4k
0
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0
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22k
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Answer: A: Easy way to run easily orthoMCL (Copy & paste)
4.9 years ago by Buffo ★ 2.4k
1
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0
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1.4k
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Comment: C: Bray-Curtis dissimilarity for comparing genomes, how to normalize?
5.0 years ago by Buffo ★ 2.4k
2
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2
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1.4k
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Bray-Curtis dissimilarity for comparing genomes, how to normalize?
genome mummer bray-curtis normalization sorensen
5.0 years ago by Buffo ★ 2.4k
0
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1
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2.2k
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Star VS hisat2 for splicing reads
star rnaseq hisat2 splicing
5.3 years ago by Buffo ★ 2.4k
2
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3
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12k
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HISAT2 indexes, GRCm38 or mm10?
RNA-Seq HISAT2 index
updated 5.4 years ago by ▴ 130 • written 7.8 years ago by ★ 2.4k
0
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7
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3.1k
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How to trim illumina reads for poly-A tail and mini-exon presence
RNA-Seq Assembly
updated 5.5 years ago by 20 • written 9.5 years ago by ★ 2.4k
0
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1
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2.1k
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Comment: A: PostDoc position at Human Genome Sequencing Center @ Baylor College of Medicine,
5.6 years ago by Buffo ★ 2.4k
0
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1
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3.9k
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Comment: C: Genome assembly with RNA-seq data?
5.8 years ago by Buffo ★ 2.4k
1
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1
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3.9k
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Comment: C: Genome assembly with RNA-seq data?
5.8 years ago by Buffo ★ 2.4k
1
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1
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3.9k
views
Answer: A: Genome assembly with RNA-seq data?
5.8 years ago by Buffo ★ 2.4k
6
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10
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3.9k
views
Genome assembly with RNA-seq data?
Assembly genome RNA-Seq
updated 2.5 years ago by 45k • written 9.1 years ago by ★ 2.4k
0
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0
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2.2k
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Comment: A: Postdocs @ New York City: Long Reads based Epigenomics, Metagenomics and Transcr
5.8 years ago by Buffo ★ 2.4k
1
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1
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1.9k
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Answer: A: converting accession numbers to Gene Symbol
5.9 years ago by Buffo ★ 2.4k
1
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0
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2.4k
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Comment: C: Which is better: webgestalt vs david?
5.9 years ago by Buffo ★ 2.4k
2
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1
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3.1k
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Answer: A: Question about miRNAs
6.0 years ago by Buffo ★ 2.4k
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0
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959
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Comment: C: Detect synthetic miRNA via miRDeep2
6.0 years ago by Buffo ★ 2.4k
2
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0
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9.3k
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Comment: C: *.rnk file preparation for GSEA analysis
6.0 years ago by Buffo ★ 2.4k
0
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0
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3.7k
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Comment: C: gene sequence fetching from bam or fastq file of rna seq data
6.0 years ago by Buffo ★ 2.4k
0
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0
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2.8k
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Comment: C: REACTOME and Ingenuity Pathway Analysis have inconsistent results
6.0 years ago by Buffo ★ 2.4k
1
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0
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2.8k
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Answer: A: REACTOME and Ingenuity Pathway Analysis have inconsistent results
6.0 years ago by Buffo ★ 2.4k
0
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1
reply
10k
views
Comment: C: How to color nodes in Cytoscape according to expression of genes? How should the
6.1 years ago by Buffo ★ 2.4k
0
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0
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1.4k
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Answer: A: how to identify gene expression and genes responsible for virulence
6.1 years ago by Buffo ★ 2.4k
0
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0
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1.7k
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Comment: C: Denovo genome assembly
6.1 years ago by Buffo ★ 2.4k
0
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2
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3.7k
views
Comment: C: gene sequence fetching from bam or fastq file of rna seq data
6.1 years ago by Buffo ★ 2.4k
1
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0
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1.5k
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Comment: C: GO enrichment analysis
6.1 years ago by Buffo ★ 2.4k
0
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1
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1.8k
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Answer: A: what is Kmer coverage
6.1 years ago by Buffo ★ 2.4k
0
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1
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1.6k
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Comment: C: RNAseq analysis on serial sample
6.1 years ago by Buffo ★ 2.4k
1
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0
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7.3k
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Comment: A: Python Program to read .fasta file to .txt file
6.1 years ago by Buffo ★ 2.4k
0
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1
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1.5k
views
Comment: C: GO enrichment analysis
6.1 years ago by Buffo ★ 2.4k
2
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0
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2.1k
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Comment: C: Is Batch correction required for the same micro array platform?
6.1 years ago by Buffo ★ 2.4k
0
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0
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2.7k
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Comment: C: Removing bases from reads at specific positions (in the middle)
6.1 years ago by Buffo ★ 2.4k
0
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1
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2.7k
views
Answer: A: Removing bases from reads at specific positions (in the middle)
6.1 years ago by Buffo ★ 2.4k
476 results • Page 3 of 10
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