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Comment: Comment: There are a way to align phage reads in to bacterial genomes?
4 months ago by schlogl ▴ 180
4
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2
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606
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There are a way to align phage reads in to bacterial genomes?
alignment sequences reads
updated 4 months ago by 153k • written 4 months ago by ▴ 180
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0
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1.7k
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Answer: Answer: Best way of getting a good introduction with bioconductor and biopyhton
14 months ago by schlogl ▴ 180
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0
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849
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Comment: Comment: Need some help to develop some python code to analyze kmer data
20 months ago by schlogl ▴ 180
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2
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849
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Need some help to develop some python code to analyze kmer data
Python R
20 months ago by schlogl ▴ 180
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0
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3.0k
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Answer: Answer: How to use efetch to download genome/proteome/etc. at the command line?
23 months ago by schlogl ▴ 180
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0
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1.6k
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Comment: Comment: Counting distance between kmer instances in a sequence
2.1 years ago by schlogl ▴ 180
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0
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11k
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Comment: Comment: Can't locate Bio/SeqIO.pm - path error?
2.1 years ago by schlogl ▴ 180
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0
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4.0k
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Comment: Comment: Finding 16 mer not present in GRCh38
2.2 years ago by schlogl ▴ 180
5
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2
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1.6k
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Counting distance between kmer instances in a sequence
kmers python inter-distance R
2.1 years ago by schlogl ▴ 180
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0
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638
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Using jellyfish in a slide window analysis
samtools jellyfish slidewindow
2.2 years ago by schlogl ▴ 180
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0
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1.1k
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Comment: Comment: Using TRF in multiple files
2.3 years ago by schlogl ▴ 180
2
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3
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1.1k
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Using TRF in multiple files
tandem TRF repeats
2.3 years ago by schlogl ▴ 180
3
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3
replies
2.8k
views
Getting a curl: (22) The requested URL returned error: 500 ERROR
ncbi
updated 2.5 years ago by 45k • written 2.6 years ago by ▴ 180
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0
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2.8k
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Comment: Comment: Getting a curl: (22) The requested URL returned error: 500 ERROR
2.6 years ago by schlogl ▴ 180
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0
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2.8k
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Comment: Comment: Getting a curl: (22) The requested URL returned error: 500 ERROR
2.6 years ago by schlogl ▴ 180
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0
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5.9k
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Comment: Comment: CAI in python: SeqUtils.CodonUsage vs CAI package
2.6 years ago by schlogl ▴ 180
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0
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1.6k
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Comment: Comment: Alien-hunter outputs
2.6 years ago by schlogl ▴ 180
2
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4
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1.6k
views
Alien-hunter outputs
alien-hunter
2.6 years ago by schlogl ▴ 180
1
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1
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1.6k
views
Answer: Answer: Alien-hunter outputs
2.6 years ago by schlogl ▴ 180
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0
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1.6k
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Comment: Comment: Alien-hunter outputs
2.6 years ago by schlogl ▴ 180
0
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0
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919
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Comment: Comment: Frequency of a trinucleotide normalized by synonymous codons
2.7 years ago by schlogl ▴ 180
2
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2
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919
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Frequency of a trinucleotide normalized by synonymous codons
synonymous codons
2.7 years ago by schlogl ▴ 180
1
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0
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664
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Statistics for large k-mers with low counts
genomes k-mers statistics
3.0 years ago by schlogl ▴ 180
1
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3
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1.5k
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Looking for a example of using bedtools nuc in many fasta files
bedtools
3.1 years ago by schlogl ▴ 180
1
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0
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1.5k
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Answer: Answer: Looking for a example of using bedtools nuc in many fasta files
3.1 years ago by schlogl ▴ 180
0
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0
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1.5k
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Comment: Comment: Looking for a example of using bedtools nuc in many fasta files
3.1 years ago by schlogl ▴ 180
0
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1
reply
2.1k
views
Comment: Comment: Splitting Gbff files
3.1 years ago by schlogl ▴ 180
3
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3
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2.1k
views
Splitting Gbff files
Gbff
updated 3.1 years ago by 103k • written 3.1 years ago by ▴ 180
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0
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6.5k
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Comment: Comment: About calculating the GC content in a sliding window
3.2 years ago by schlogl ▴ 180
1
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1
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2.0k
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Comment: Comment: 'Can someone give me a direction on how to draw a figure like this one of dinucl
3.8 years ago by schlogl ▴ 180
1
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0
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2.0k
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Comment: Comment: Can someone give me a direction on how to draw a figure like this one?
3.8 years ago by schlogl ▴ 180
11
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5
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2.0k
views
'Can someone give me a direction on how to draw a figure like this one of dinucleotide frequency distribution pattern of genomes'?
plots
updated 3.8 years ago by ★ 2.9k • written 3.8 years ago by ▴ 180
0
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1
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128k
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Comment: Comment: Convertion Of Gff3 To Gtf
3.8 years ago by schlogl ▴ 180
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0
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1.7k
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Comment: Comment: Get gene sequence for oragnism using python
4.1 years ago by schlogl ▴ 180
0
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1
reply
1.7k
views
Comment: Comment: Get gene sequence for oragnism using python
4.1 years ago by schlogl ▴ 180
1
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0
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4.0k
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Comment: Comment: Finding 16 mer not present in GRCh38
4.1 years ago by schlogl ▴ 180
0
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1
reply
7.9k
views
Comment: Comment: k-mer finding and counting
4.3 years ago by schlogl ▴ 180
0
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0
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1.4k
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Have a question about run jellyfish in many directories with different number of zipped fasta files
bash
4.3 years ago by schlogl ▴ 180
0
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0
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4.4k
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Comment: Comment: specific k-mer count in multi fasta file
4.3 years ago by schlogl ▴ 180
0
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1
reply
4.4k
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Comment: Comment: specific k-mer count in multi fasta file
4.3 years ago by schlogl ▴ 180
0
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0
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2.0k
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Comment: Comment: Comparing genomes against randomized genomes
4.4 years ago by schlogl ▴ 180
0
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0
replies
2.0k
views
Comment: Comment: Comparing genomes against randomized genomes
4.4 years ago by schlogl ▴ 180
2
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6
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2.0k
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Comparing genomes against randomized genomes
sequence genomes
4.4 years ago by schlogl ▴ 180
0
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0
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2.0k
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Comment: Comment: Comparing genomes against randomized genomes
4.4 years ago by schlogl ▴ 180
4
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2
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983
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R or Python packages to work with SNPs
snp
updated 4.6 years ago by ▴ 180 • written 4.6 years ago by ▴ 180
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0
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1.6k
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Comment: C: Programmatically retrieving taxon classification
4.7 years ago by schlogl ▴ 180
0
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0
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1.6k
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Comment: C: Programmatically retrieving taxon classification
4.7 years ago by schlogl ▴ 180
6
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5
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1.6k
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Programmatically retrieving taxon classification
sequence
updated 4.7 years ago by ▴ 540 • written 4.7 years ago by ▴ 180
0
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1
reply
152k
views
Comment: C: Useful Bash Commands To Handle Fasta Files
4.7 years ago by schlogl ▴ 180
131 results • Page 1 of 3
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