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4
votes
3
replies
3.3k
views
Merge several bigWig files (with different intervals) into single GRanges object
ChIP-Seq R Gviz GenomicFeatures rtracklayer
updated 4.7 years ago by 20 • written 5.2 years ago by ▴ 100
0
votes
0
replies
3.3k
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Comment: C: Merge several bigWig files (with different intervals) into single GRanges object
5.2 years ago by Roman Hillje ▴ 100
0
votes
1
reply
17k
views
Comment: C: Downloading paired end fastq from SRA
6.0 years ago by Roman Hillje ▴ 100
0
votes
1
reply
17k
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Comment: C: Downloading paired end fastq from SRA
6.0 years ago by Roman Hillje ▴ 100
1
vote
1
reply
17k
views
Comment: C: Downloading paired end fastq from SRA
6.0 years ago by Roman Hillje ▴ 100
0
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2
replies
17k
views
Comment: A: Downloading paired end fastq from SRA
6.0 years ago by Roman Hillje ▴ 100
0
votes
0
replies
1.0k
views
Taking scores from DiffBind for other analysis?
ChIP-Seq DiffBind
6.8 years ago by Roman Hillje ▴ 100
0
votes
3
replies
2.0k
views
Get positions in BAM with reads supporting at least 2 different nucleotides
RNA-Seq
updated 7.0 years ago by 166k • written 7.0 years ago by ▴ 100
0
votes
1
reply
10k
views
Comment: C: List of TSS from GTF file
7.4 years ago by Roman Hillje ▴ 100
6
votes
5
replies
10k
views
List of TSS from GTF file
TSS GTF
updated 7.4 years ago by 36k • written 7.4 years ago by ▴ 100
0
votes
0
replies
2.1k
views
Merging multiple scRNAseq samples: Normalize first and then merge or merge and normalize all together?
scRNAseq
7.7 years ago by Roman Hillje ▴ 100
3
votes
0
replies
8.2k
views
Answer: A: ChromHMM Output Descriptions
7.8 years ago by Roman Hillje ▴ 100
0
votes
0
replies
3.0k
views
Comment: C: Extract specific nucleotide AND total read information (tags) from BAM
7.9 years ago by Roman Hillje ▴ 100
0
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0
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3.0k
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Comment: C: Extract specific nucleotide AND total read information (tags) from BAM
7.9 years ago by Roman Hillje ▴ 100
0
votes
0
replies
3.0k
views
Comment: C: Extract specific nucleotide AND total read information (tags) from BAM
7.9 years ago by Roman Hillje ▴ 100
3
votes
7
replies
3.0k
views
Extract specific nucleotide AND total read information (tags) from BAM
bam samtools
updated 7.9 years ago by 166k • written 7.9 years ago by ▴ 100
0
votes
0
replies
3.0k
views
Comment: C: Extract specific nucleotide AND total read information (tags) from BAM
7.9 years ago by Roman Hillje ▴ 100
1
vote
2
replies
2.4k
views
RNAseq: reads in different positions in IGV vs IGB
RNA-Seq igv igb
7.9 years ago by Roman Hillje ▴ 100
3
votes
1
reply
3.8k
views
Analysis of BAF from SNP array data
snp BAF
updated 8.0 years ago by ▴ 10 • written 9.3 years ago by ▴ 100
0
votes
0
replies
1.8k
views
Comment: C: DiffBind: Counting reads in overlapping regions
8.1 years ago by Roman Hillje ▴ 100
0
votes
2
replies
1.8k
views
DiffBind: Counting reads in overlapping regions
DiffBind R ChIP-Seq
8.1 years ago by Roman Hillje ▴ 100
0
votes
0
replies
2.3k
views
Comment: C: TCGA: Stratify breast cancer cases based on presence of Her2 mutation and get tr
8.2 years ago by Roman Hillje ▴ 100
2
votes
2
replies
2.3k
views
TCGA: Stratify breast cancer cases based on presence of Her2 mutation and get transcription data?
TCGA API RNA-Seq
updated 8.2 years ago by ★ 4.8k • written 8.2 years ago by ▴ 100
0
votes
0
replies
14k
views
Comment: C: Extract further information from deepTools plotPCA
8.2 years ago by Roman Hillje ▴ 100
3
votes
6
replies
14k
views
Extract further information from deepTools plotPCA
ChIP-Seq deepTools
8.2 years ago by Roman Hillje ▴ 100
0
votes
1
reply
14k
views
Comment: C: Extract further information from deepTools plotPCA
8.2 years ago by Roman Hillje ▴ 100
0
votes
1
reply
14k
views
Comment: C: Extract further information from deepTools plotPCA
8.2 years ago by Roman Hillje ▴ 100
0
votes
0
replies
11k
views
Comment: C: How to obtain TSS from list of given genes
8.4 years ago by Roman Hillje ▴ 100
0
votes
0
replies
2.8k
views
Comment: C: Comparison of ChIPseq enrichment in specific regions
8.4 years ago by Roman Hillje ▴ 100
2
votes
4
replies
2.8k
views
Comparison of ChIPseq enrichment in specific regions
ChIP-Seq deeptools
updated 8.4 years ago by ★ 2.1k • written 8.4 years ago by ▴ 100
0
votes
0
replies
2.8k
views
Comment: C: Comparison of ChIPseq enrichment in specific regions
8.4 years ago by Roman Hillje ▴ 100
0
votes
0
replies
1.7k
views
Comment: C: General quantification of signal enrichment in ChIPseq experiments
8.5 years ago by Roman Hillje ▴ 100
1
vote
2
replies
1.7k
views
General quantification of signal enrichment in ChIPseq experiments
ChIP-Seq
updated 8.5 years ago by 105k • written 8.5 years ago by ▴ 100
33 results • Page 1 of 1
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