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4
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6
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2.4k
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ReactomePA enrichPathway function
ReactomePA enrichPathway
updated 3 months ago by • 0 • written 2.9 years ago by ▴ 380
13
votes
6
replies
761
views
6 follow
Is training data used exclusively in machine learning
learning machine
updated 22 months ago by 84k • written 22 months ago by ▴ 380
0
votes
0
replies
1.7k
views
Comment: Comment: Scatter plot of DEG in R
23 months ago by ATCG ▴ 380
2
votes
2
replies
1.7k
views
Scatter plot of DEG in R
R RNA-seq Bioconductor DEG
23 months ago by ATCG ▴ 380
0
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0
replies
37k
views
Comment: Comment: In Seurat, How Do nCount_RNA Differ from nFeature_RNA?
23 months ago by ATCG ▴ 380
8
votes
5
replies
2.7k
views
Can someone explain in detail the meaning of a gseaplot in GSEA
gseaplot
updated 2.0 years ago by ▴ 270 • written 2.9 years ago by ▴ 380
0
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1
reply
108k
views
Answer: A: The Biostar Handbook. A bioinformatics e-book for beginners.
2.0 years ago by ATCG ▴ 380
1
vote
0
replies
18k
views
Comment: C: Batch correction in DESeq2
2.3 years ago by ATCG ▴ 380
0
votes
1
reply
18k
views
Comment: C: Batch correction in DESeq2
2.3 years ago by ATCG ▴ 380
0
votes
1
reply
18k
views
Comment: C: Batch correction in DESeq2
2.3 years ago by ATCG ▴ 380
0
votes
1
reply
18k
views
Comment: C: Batch correction in DESeq2
updated 2.3 years ago by 84k • written 2.3 years ago by ▴ 380
0
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1
reply
18k
views
Comment: C: Batch correction in DESeq2
2.3 years ago by ATCG ▴ 380
0
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1
reply
18k
views
Comment: C: Batch correction in DESeq2
2.3 years ago by ATCG ▴ 380
0
votes
1
reply
18k
views
Comment: C: Batch correction in DESeq2
2.3 years ago by ATCG ▴ 380
1
vote
1
reply
608
views
RNA-seq batches across different tissues
RNA-Seq Normalization
2.3 years ago by ATCG ▴ 380
0
votes
1
reply
18k
views
Comment: C: Batch correction in DESeq2
2.3 years ago by ATCG ▴ 380
0
votes
0
replies
475
views
RAP-seq datasets but no corresponding RNA-seq
RNA-Seq TRAP-Seq Translation Transcription
2.4 years ago by ATCG ▴ 380
0
votes
0
replies
644
views
Normalization for RNA-Seq samples
RNA-Seq Tissue specific Transcriptome
2.4 years ago by ATCG ▴ 380
1
vote
2
replies
632
views
help clarify ways to measure coverage in RNA-Seq libraries
RNA-Seq coverage
2.6 years ago by ATCG ▴ 380
0
votes
0
replies
632
views
Comment: C: help clarify ways to measure coverage in RNA-Seq libraries
2.6 years ago by ATCG ▴ 380
1
vote
0
replies
1.9k
views
Comment: C: Understanding the colData in DESeq2
2.6 years ago by ATCG ▴ 380
0
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1
reply
1.9k
views
Comment: C: Understanding the colData in DESeq2
2.6 years ago by ATCG ▴ 380
0
votes
1
reply
1.9k
views
Comment: C: Understanding the colData in DESeq2
2.6 years ago by ATCG ▴ 380
4
votes
6
replies
1.9k
views
Understanding the colData in DESeq2
DEseq2 ColData LFC
2.6 years ago by ATCG ▴ 380
0
votes
0
replies
3.0k
views
Comment: C: HISAT2: does the parameter -k 1 means unique mapping?
2.6 years ago by ATCG ▴ 380
0
votes
0
replies
599
views
Comment: C: over-representation of sequences that map to "Drosophila melanogaster signal rec
2.6 years ago by ATCG ▴ 380
0
votes
2
replies
599
views
over-representation of sequences that map to "Drosophila melanogaster signal recognition particle
RNA-Seq TRAP-Seq FastQC SRP representation
2.6 years ago by ATCG ▴ 380
0
votes
0
replies
977
views
Comment: C: Discounting secreted proteins from with data of signal recognition particle tran
2.6 years ago by ATCG ▴ 380
0
votes
1
reply
772
views
Comment: C: Differential gene expression using DESeq2 on Ribo-Seq data
2.6 years ago by ATCG ▴ 380
1
vote
3
replies
772
views
Differential gene expression using DESeq2 on Ribo-Seq data
DESeq2 Ribo-Seq Differential translation
updated 2.6 years ago by 84k • written 2.6 years ago by ▴ 380
0
votes
0
replies
3.6k
views
Comment: C: Is removing rRNA a necessary step in RNA-seq?
2.7 years ago by ATCG ▴ 380
0
votes
1
reply
3.6k
views
Comment: C: Is removing rRNA a necessary step in RNA-seq?
2.7 years ago by ATCG ▴ 380
0
votes
1
reply
3.6k
views
Comment: C: Is removing rRNA a necessary step in RNA-seq?
2.7 years ago by ATCG ▴ 380
1
vote
1
reply
780
views
Ribo-seq data analysis using an RNA-Seq analysis pipeline
RNA-Seq Ribo-Seq TRAP-Seq
updated 2.7 years ago by ★ 4.0k • written 2.7 years ago by ▴ 380
0
votes
0
replies
544
views
Protein annotation tool
Proteins
2.7 years ago by ATCG ▴ 380
0
votes
2
replies
685
views
Comment: C: Change the field separator
2.7 years ago by ATCG ▴ 380
7
votes
8
replies
685
views
Change the field separator
R awk field separator
updated 2.7 years ago by ★ 1.2k • written 2.7 years ago by ▴ 380
0
votes
0
replies
1.3k
views
Comment: C: Is it appropriate to apply quantile normalization on RNA-Seq before computing th
2.8 years ago by ATCG ▴ 380
0
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1
reply
1.3k
views
Comment: C: Is it appropriate to apply quantile normalization on RNA-Seq before computing th
2.8 years ago by ATCG ▴ 380
2
votes
4
replies
1.3k
views
Is it appropriate to apply quantile normalization on RNA-Seq before computing the Pearson correlation?
RNA-Seq Quantile Normalization Correlation
2.8 years ago by ATCG ▴ 380
4
votes
2
replies
2.5k
views
Is it possible to run DESeq with only two replicates in one group?
RNA-Seq DESeq2 Replicates
updated 2.8 years ago by 70k • written 2.8 years ago by ▴ 380
0
votes
10
replies
768
views
Differential gene expression analysis
RNA-Seq DESeq2
updated 2.8 years ago by 13k • written 2.8 years ago by ▴ 380
0
votes
1
reply
768
views
Comment: C: Differential gene expression analysis
2.8 years ago by ATCG ▴ 380
0
votes
1
reply
768
views
Comment: C: Differential gene expression analysis
2.8 years ago by ATCG ▴ 380
0
votes
1
reply
768
views
Comment: C: Differential gene expression analysis
2.8 years ago by ATCG ▴ 380
0
votes
1
reply
1.4k
views
Comment: C: How to estimate the inter sample and inter replicate correlation coefficient?
2.9 years ago by ATCG ▴ 380
0
votes
1
reply
1.4k
views
Comment: C: How to estimate the inter sample and inter replicate correlation coefficient?
2.9 years ago by ATCG ▴ 380
3
votes
5
replies
1.4k
views
How to estimate the inter sample and inter replicate correlation coefficient?
RNA-Seq Replicates R2 Correlation coefficients
2.9 years ago by ATCG ▴ 380
0
votes
0
replies
2.7k
views
Comment: C: Can someone explain in detail the meaning of a gseaplot in GSEA
2.9 years ago by ATCG ▴ 380
0
votes
1
reply
2.7k
views
Comment: C: Can someone explain in detail the meaning of a gseaplot in GSEA
2.9 years ago by ATCG ▴ 380
167 results • Page 1 of 4
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