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Visualize smooth ChIP peaks with Homer makeUCSCfile
homer ucsc ChIP-Seq
updated 4 weeks ago by • 0 • written 6.0 years ago by ▴ 90
5
votes
14
replies
2.1k
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Bowtie2 hg19 reference for gatk MuTect
gatk bowtie2
updated 21 months ago by ▴ 60 • written 3.9 years ago by ▴ 90
0
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0
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6.3k
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Comment: C: How To Calculate Conservation Score Of Given Bed Regions
updated 3.7 years ago by 39k • written 6.2 years ago by ▴ 90
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0
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2.1k
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Comment: C: Bowtie2 hg19 reference for gatk MuTect
3.9 years ago by varsha619 ▴ 90
0
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1
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2.1k
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Comment: C: Bowtie2 hg19 reference for gatk MuTect
3.9 years ago by varsha619 ▴ 90
0
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0
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2.1k
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Comment: C: Bowtie2 hg19 reference for gatk MuTect
3.9 years ago by varsha619 ▴ 90
0
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0
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2.1k
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Comment: C: Bowtie2 hg19 reference for gatk MuTect
3.9 years ago by varsha619 ▴ 90
0
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0
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2.1k
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Comment: C: Bowtie2 hg19 reference for gatk MuTect
3.9 years ago by varsha619 ▴ 90
0
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1
reply
2.1k
views
Comment: C: UCSC itemRgb on column 9
4.7 years ago by varsha619 ▴ 90
0
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1
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2.1k
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Comment: C: UCSC itemRgb on column 9
4.7 years ago by varsha619 ▴ 90
0
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1
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2.1k
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Comment: C: UCSC itemRgb on column 9
4.7 years ago by varsha619 ▴ 90
0
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8
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2.1k
views
UCSC itemRgb on column 9
ucsc itemRgb
4.7 years ago by varsha619 ▴ 90
0
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0
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6.4k
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Comment: C: STAR for chip-seq
5.0 years ago by varsha619 ▴ 90
0
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0
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6.4k
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Comment: C: STAR for chip-seq
5.0 years ago by varsha619 ▴ 90
0
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1
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6.4k
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Comment: C: STAR for chip-seq
5.0 years ago by varsha619 ▴ 90
0
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0
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6.4k
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Comment: C: STAR for chip-seq
5.0 years ago by varsha619 ▴ 90
0
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1
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6.4k
views
Comment: C: STAR for chip-seq
5.0 years ago by varsha619 ▴ 90
0
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1
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6.4k
views
Comment: C: STAR for chip-seq
5.0 years ago by varsha619 ▴ 90
8
votes
13
replies
6.4k
views
STAR for chip-seq
star ChIP-Seq alignment
updated 5.0 years ago by ★ 1.9k • written 5.0 years ago by ▴ 90
0
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1
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1.8k
views
Comment: C: fasta to bed format with more information that just chr locations
5.1 years ago by varsha619 ▴ 90
0
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1
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1.8k
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Comment: C: fasta to bed format with more information that just chr locations
5.1 years ago by varsha619 ▴ 90
13
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10
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1.8k
views
fasta to bed format with more information that just chr locations
fasta to bed
updated 5.1 years ago by ★ 3.9k • written 5.1 years ago by ▴ 90
0
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0
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1.9k
views
Comment: C: using MACS2 with hg38
5.2 years ago by varsha619 ▴ 90
0
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2
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1.9k
views
using MACS2 with hg38
macs2 hg38
updated 5.2 years ago by 13k • written 5.2 years ago by ▴ 90
0
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1
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2.0k
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Comment: C: bp overlap between multiple beds
5.3 years ago by varsha619 ▴ 90
0
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1
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2.0k
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Comment: C: bp overlap between multiple beds
5.4 years ago by varsha619 ▴ 90
0
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1
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2.0k
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Comment: C: bp overlap between multiple beds
5.4 years ago by varsha619 ▴ 90
1
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7
replies
2.0k
views
bp overlap between multiple beds
bedtools multiinter venn
updated 5.4 years ago by 35k • written 5.4 years ago by ▴ 90
0
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0
replies
3.7k
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Comment: C: Finding An Genomic Intervals Shared For A Given Individual As Called By Two Or M
5.4 years ago by varsha619 ▴ 90
0
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0
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4.3k
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Comment: C: wig files to bigwig using UCSC kent
5.4 years ago by varsha619 ▴ 90
0
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0
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4.3k
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Comment: C: wig files to bigwig using UCSC kent
5.4 years ago by varsha619 ▴ 90
0
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1
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4.3k
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Comment: C: wig files to bigwig using UCSC kent
5.4 years ago by varsha619 ▴ 90
0
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1
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4.3k
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Comment: C: wig files to bigwig using UCSC kent
5.4 years ago by varsha619 ▴ 90
1
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1
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4.3k
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Comment: C: wig files to bigwig using UCSC kent
5.4 years ago by varsha619 ▴ 90
7
votes
14
replies
4.3k
views
wig files to bigwig using UCSC kent
wigtobigwig
updated 5.4 years ago by ▴ 580 • written 5.4 years ago by ▴ 90
0
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1
reply
4.3k
views
Comment: C: wig files to bigwig using UCSC kent
5.4 years ago by varsha619 ▴ 90
0
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1
reply
4.3k
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Comment: C: wig files to bigwig using UCSC kent
5.4 years ago by varsha619 ▴ 90
0
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0
replies
2.6k
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Comment: C: bedops gff2bed error
5.4 years ago by varsha619 ▴ 90
2
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2
replies
2.6k
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bedops gff2bed error
bedops gff2bed
updated 5.4 years ago by 35k • written 5.4 years ago by ▴ 90
3
votes
2
replies
2.5k
views
Does MACS score correlate with binding strength
macs ChIP-Seq
updated 5.4 years ago by 20 • written 5.5 years ago by ▴ 90
0
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1
reply
3.1k
views
Comment: C: meme-chip command line usage error
5.5 years ago by varsha619 ▴ 90
0
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1
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3.1k
views
Answer: A: meme-chip command line usage error
5.5 years ago by varsha619 ▴ 90
3
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10
replies
3.1k
views
meme-chip command line usage error
meme-chip
5.5 years ago by varsha619 ▴ 90
0
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0
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3.1k
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Comment: C: meme-chip command line usage error
5.5 years ago by varsha619 ▴ 90
0
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0
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3.1k
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Comment: C: meme-chip command line usage error
5.5 years ago by varsha619 ▴ 90
0
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1
reply
7.4k
views
Comment: C: How to plot ChIP-seq Density vs Distance from TSS using Homer annoted files
5.5 years ago by varsha619 ▴ 90
0
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0
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2.5k
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Comment: C: Does MACS score correlate with binding strength
5.5 years ago by varsha619 ▴ 90
0
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0
replies
3.6k
views
Comment: C: bedGraphToBigWig error - end coordinate bigger than chr
5.9 years ago by varsha619 ▴ 90
1
vote
4
replies
3.6k
views
bedGraphToBigWig error - end coordinate bigger than chr
bedGraphToBigWig macs2
updated 5.9 years ago by 35k • written 5.9 years ago by ▴ 90
0
votes
0
replies
2.7k
views
Comment: C: phastcon conservation score for chip seq peaks
6.2 years ago by varsha619 ▴ 90
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